J. Chil. Chem. Soc., 56, Nº 4 (2011)
1
2-(1-Benzyl-1H-indole-3-carbonyl)-1,3-dicyclohexyl-isourea (5).
To a solution of 3-indole carboxylic acid (4) (500 mg, 1.99 mmol) in
CH2Cl2 (20 mL), was added N,N´-dicyclohexylcarbodiimide (490mg, 2.38
mmoles) and 4-dimethylaminopyridine (290 mg; 2.38 mmol). The mixture was
stirred at room temperature for 90 min. The solvent was removed in vacuo and
the residue purified by column chromatography (EtOAc: Hexane 1:1) to afford
(5) (880 mg, quantitative yield). mp : 169-171 ºC. IRνmax(cm-1) : 3327 (N-H),
3032 (C-H Arom.), 2927(C-H aliph.), 1752(C=O), 1696 (C=N), 1575(C=C).
1H NMR : 0.8-2.2 (m, 20 H), 3.43-3.51 (m, 1H, CHNH), 4.30-4.37 (m,1H,
CHN=), 5.29 (s,2H, CH -C6H5), 6.04 (d,1H,NH, J =5.7 Hz), 7.59 (s,1H, 2-H),
8.06 (dd, 1H, 4-H, Jo =24.8 Hz, Jm =2.1 Hz), 7.14-7.32 (m,8H, CH2-Ar and
5-H, 6-H, 7-H ). 13C NMR (75 MHz) : 24.6, 25.4, 25.5(2C), 26.4(2C), 31.2(2C),
32.5(2C), 49.7, 50.6, 57.1, 110.2, 111.9, 121.7, 121.9, 123.2, 127.1(2C), 127.4,
128.2(2C), 129.0, 131.1, 136.0, 136.5, 155.3, 166.8. HRMS (EI) Calcd for
C29H35N3O2, (M+) : 457.27293. Found: 457.27474.
(C=C). H NMR (300 MHz, DMSO-d ) : 3.21 (m,4H, 3’-H and 5’-H), 3.72
(s,3H, OMe), 3.78 (m,4H, 2’-H and 5’-6H), 6.40(d,1H, 6”-H, J = 8.0 Hz), 6.50
(s,1H, 2”-H), 6.56 (d,1H, 4”-H), 7.05-7.22 (m,3H, 5”-H and 2x Ar-CH ), 7.25
(m,5H, 5-H, 6-H and 3x Ar-CH2), 7.51 (d,1H, 7-H, J = 7.7 Hz), 7.742(d,1H,
4-H, J = 7.3 Hz), 7.98 (s, 1H, 2-H). 13C NMR ( 75 MHz, DMSO-d ) : 45.0(2C),
49.2, 49.8(2C), 55.3, 102.4, 105.0, 108.9, 109.7, 111.3, 121.1 6(2C), 122.6,
127.2, 127.7 (2C), 128.0, 129.1(2C), 130.1, 132.0, 136.0, 138.0, 152.7, 160.7,
165.6. HRMS (EI) Calcd for C27H27N3O2 (M+) : 425.21033. Found : 425.20922.
1-Benzyl-3-{[4-(4-nitrophenyl)-1-piperazinyl]carbonyl}-1H-Indole.
(6-e)
Prepared from 1-(4-nitrophenyl)-piperazine (468 mg; 2.1mmol) and
2-(1-Benzyl-1H-indole-3-carbonyl)-1,3-dicyclohexyl-isourea (5), (961 mg,
2.1 mmol), stirred for 6h to give crude ( 6-e) in quantitative yield. Purified by
column chromatography (EtOAc/ Hexane 1:3) to yield. 6-e (988 mg, 87 %).
mp : 157-159 ºC. IRνmax(cm-1) : 3029 (C-H arom.), 2927 (C-H aliph.), 1615
(C=O), 1592 (NO2 asym.), 1328 (NO2 sym.). 1H NMR (300 MHz, DMSO-d6)
: 3.58 (t,4H, 3’-H and 5’-H, J= 3.6 Hz), 3.82 (t,4H, 2’-H and 6’-H, J= 3.6
Hz), 5.49 (s,2H, CH2-Ar), 7.00 (d,2H, 2”-H and 6”-H, J= 9.4 Hz), 7.10-7.38
(m,7H, Ar-CH2 and 5-H, 6-H), 7.52 (d,1H, 7-H, J = 7.2 Hz), 7.81 (dd,1H, 4-H,
Jo =7.7 and Jm =1.5 Hz ), 8.02 (s,1H, 2-H), 8.08 (d,2H, 3”-H and 5”-H, J =
9.4 Hz). 13C NMR ( 75 MHz, DMSO-d ) : 44.5 (2C), 46.7, 49.9 (2C), 109.5,
111.3, 112.9 (2C), 122.7, 121.1, 121.2, 6126.2 (2C), 127.3, 127.7 (2C), 128.0,
129.1 (2C), 132.2, 136.0, 137.4, 138.0, 154.9, 165.7. HRMS (EI) Calcd for
C26H24N4O3 (M+) : 440.18484. Found : 440.18490.
General Procedure for the Synthesis of 1-Benzyl-3-[4-(aryl-1-
piperazinyl) carbonyl]-1H-Indoles 6(a-f).
1-Benzyl-3-[4-(2-pyridinyl-1-piperazinyl)carbonyl]-1H-Indole (6-a).
To a solution of 1-Pyridin-2-yl-piperazine (220 mg, 1.35 mmol) in CH2Cl2
(30 mL) was added 2-(1-Benzyl-1H-indole-3-carbonyl)-1,3-dicyclohexyl-
isourea (5), (618 mg,1.35 mmol) and the mixture stirred at room temperature
for 1h. The crude residue was concentrated in vacuo, and purified by column
chromatography (EtOAc/ Hexane 1:1) to give pure 6(a) (386 mg, 65%). mp
: 114-116 ºC. IRνmax(cm-1): 3027 (C-H Arom.), 1619 (C=O), 1542 (C=C). 1H
NMR (300 MHz, DMSO-d ): 3.57 (b.s. 4H, 2’-H, 6’-H), 3.77 (b.s., 4H, 3’-H,
5’-H), 5.40 (s,2H, CH -Ar)6, 6.59(t,1H, 5”’-H, J = 5.9 Hz) 6.71 (d,1H, 3”’-H,
J = 8.4 Hz), 7.05-7.252(m,7H, 5-H, 6-H and Ar-CH2), 7.37(m,1H, 7-H), 7.46
(t,1H, 4”’-H, J = 7.8 Hz), 7.74 (m,2H, 4-H y 2-H), 8.10 (d,1H, 6”’-H, J =
4.2 Hz). 13C RMN ( 75 MHz, DMSO-d ) : 44.8 (2C), 45.4 , 50.1(2C) , 107.5
, 109.9 , 110.8, 113.6, 120.9, 121.0, 1262.6, 127.0, 127.3 (2C), 127.9, 128,.8,
128.9(2C), 131.5, 136.0, 137.7, 147.9, 159.2, 166.0. HRMS (EI) Calcd for
C25H24N4O (M+): 396.19501. Found : 396.19505.
1 -Benzyl-3-[(4-phenyl-1-piperazinyl)carbonyl]-1H-Indole. (6-f)
Prepared from 1-Phenyl-piperazine (177 mg ,1.09 mmol) and 2-(1-Benzyl-
1H-indole-3-carbonyl)-1,3-dicyclohexyl-isourea (5), (499 mg, 1.09 mmoles ),
stirred for 1.5 h to give crude ( 6-f) in quantitative yield. Purified by column
chromatography (EtOAc / Hexane 1:1) to yield ( 6-f) (384 mg, 89%). mp :
124-125 ºC. IRνmax(cm-1) : 3033 (C-H arom.), 2927 (C-H aliph.), 1626 (C=O),
1576 (C=C Arom). 1H NMR (300 MHz, DMSO-d6) : 3.29 (t,4H, 3’-H and 5’-H,
J= 4.9), 3.88 (t,4H, 2’-H and 6’-H, J= 4,9 Hz), 5.38 (s,2H, CH -Ar) , 6.86 (t,1H,
4”-H, J= 7.3 Hz), 6.94 (d,2H, 2”-H, and 6”-H, J = 7.9 Hz), 72.15-7.38 (m,10H,
3”-H, 5”-H, Ar-CH2, 5-H, 6-H and 7-H ), 7.58 (s,1H,2-H), 7.76 (m,1H, 4-H).
13C NMR ( 75 MHz, DMSO-d6) : 44.9 (2C), 49.4, 50.0 (2C), 110.1, 110.2,
116.2 (2C), 119.9, 120.4, 120.8, 122.4, 126.3, 126.8 (2C), 127.6, 128.6 (2C),
128.9 (2C),130.6, 135.7, 136.3, 150.8, 165.9 HRMS (EI) Calcd for C26H25N3O,
(M+): 395.19976. Found : 395.19940.
1-Benzyl-3-{[4-(2-methoxyphenyl)-1-piperazinyl]carbonyl}-1H-
Indole.(6-b)
Prepared from 1-(2-methoxyphenyl)-piperazine (490 mg, 2.55 mmol) and
2-(1-Benzyl-1H-indole-3-carbonyl)-1,3-dicyclohexyl-isourea (5), (1167 mg,
2.55 mmol), to give crude 6(b) in quantitative yield. The residue was purified
by column chromatography (EtOAc/ Hexane 1:1) to yield 6(b) (307 mg, 92%).
mp : 130-131 ºC. IRνmax(cm-1) : 3015 (C-H Arom.), 1610 (C=O), 1541 (C=C).
1H NMR (300 MHz, DMSO-d ) : 3.0 (b.s.,4H, 3’-H and 5’-H), 3.79 (b.s., 7H,
2’-H, 6’-H and OMe), 5.47 (6s,2H, CH2-Ar), 6.92(m,4H, 3”-H, 4”-H, 5”-H
and 6”-H), 7.12-7.37 (m,7H, 5-H,6-H and 5x CH2-Ar), 7.49(m,1H, 7-H), 7.76
(m,1H, 4-H), 7.98 (s,1H, 2-H). 13C NMR ( 75 MHz, DMSO-d6) : 45.5 (2C),
49.8, 51.1 (2C), 55.8, 109.8, 111.3, 112.3, 118.8, 121.0, 121.1, 121.3, 122.6,
123.3, 127.2, 127.7(2C), 128.0, 129.1(2C), 132.0, 136.0, 138.0, 141.3, 152.5,
165.4. HRMS (EI) Calcd for C27H27N3O (M+) : 425.21033. Found : 425.20978.
ACKNOWLEDGEMENTS
We acknowledge with thanks to PROYECTO FONDECYT 1090169
for the financial support.
REFERENCES
1. I.Borza, S. Kolok, A. Gere, E. Àgai-Csongor, B.Ágai, G. Tárkányi, C.
Horváth, G. Barta-Szalai, E.Bozó, C. Kiss, A.Bielik, J. Nagy, S.Farkasa
and G. Dománya, Bioorg. Med. Chem. Lett. 13, 3859–3861, (2003).
2. S. Pedpradab, R.A. Edrada, R. Ebel, V. Wray, and P. Proksch. J. Nat.
Prod. 67, 2113-2116, (2004).
1-Benzyl-3-{[4-(4-fluorophenyl)-1-piperazinyl]carbonyl}-1H-Indole.
(6-c)
Prepared from 1-(4-fluorophenyl)-piperazine (330 mg, 1.83 mmol),
and 2-(1-Benzyl-1H-indole-3-carbonyl)-1,3-dicyclohexyl-isourea (5), (836
mg, 1.83.mmol) to give crude 6(c) in quantitative yield. Purified by column
chromatography (EtOAc/ Hexane 1:1), to yield (589 mg, 78%). mp : 140-
141 ºC. IRνmax(cm-1) : 3058 (C-H Arom.), 2927 (C-H aliph.), 1625 (C=O),
3. T. Heinrich, H. Bottcher, G. D. Bartoszyk, H. E. Greiner; Ch. A. Seyfried;
and Ch. van Ámsterdam. J. Med. Chem. 47, 4677-4683, (2004).
4. T. Opatz and D. Ferenc, Org. Lett. 8, 20,4473-4475, (2006).
5. G. W. Gribble, J. Chem. Soc., Perkin Trans. 1. 1045-1075 (2000).
6. G. R. Humphrey; J. T. Kuethe, Chem. Rev., 106, 2875-2911, (2006).
7. H. Pessoa-Mahana, M. González, M. González, C.David.Pessoa-Mahana,
R. Araya-Maturana, N. Ron, C.Saitz. Arkivoc (xi), 316-325, (2009).
8. I. Borza; E.A. Bozo´; G. Barta-Szalai, C. Kiss, G. Tárkányi, A. Demeter,
T. Gáti, V. Háda, S. Kolok, A. Gere, L. Fodor, J. Nagy, K. Galgóczy, I.
Magdo´, B. A. Agai, J. F. F. Bertha, G. M. Keseru, C. Horváth, S. Farkas,
I. Greiner, and G. Domány. J. Med. Chem. 50, 901-914, (2007).
9. T. Heinrich, H. Bottcher, K. Schiemann, G. Hölzemann, M. Schwarz, G.
D. Bartoszyk, Ch. van Ámsterdam, H. E. Greiner, and Ch. A. Seyfried.
Bioorg. Med. Chem. 12, 4843–4852, (2004).
10. P. Muñoz-Ruiz, L. Rubio, E. García-Palomero, I. Dorronsoro, M. del
Monte-Millán, R. Valenzuela, P. Usán, C. de Austria, M. Bartolini, V.
Andrisano, A. Bidon-Chanal, M. Orozco, F. J. Luque, M. Medina, and A.
Martínez.. J. Med. Chem. 48, 7223-7233, (2005).
11. S. Vangveravong, E. McElveen, M. Taylor, J. Xu, Z. Tu, R. R. Luedtkeb
and R. H. Macha, Bioorg. Med. Chem. 14, 815–825, (2006).
1
1580 (C=C). H NMR (300 MHz, DMSO-d6) : 3.17 (m,4H, 3’-H and 5’-H),
3.81(m,4H, 2’-H, 6’-H), 5.51 (s,2H, CH -Ar), 6.94-7.35 (m,11H, 5-H, 6-H,
2”-H, 3”-H, 5”-H 6”-H and CH2-Ar), 72.54 (d,1H, 7-H, Jo = 7.3 Hz), 7.77
(dd,1H, 4-H, Jo = 6,5 Hz, Jm =1.5 Hz), 8.01 (s,1H, 2-H). 13C NMR ( 75 MHz,
DMSO-d6) : 45.0 (2C), 49.8, 50.0 (2C), 109.8, 111.3, 115.8 (d,2C, 2J = 22 Hz),
118.2 (d, 2C,3J = 7.6 Hz ), 121.0, 121.1, 122.6, 127.1, 127.7 (2C), 128.0, 129.1
(2C), 132.1, 136.0, 138.0, 148.3 (d, 4J =2.0 Hz), 156.8 (d, 1J = 227 Hz), 165.5.
HRMS (EI) Calcd for C26H24FN3O (M+) : 413.19034. Found : 413.19025.
1-Benzyl-3-{[4-(3-methoxyphenyl)-1-piperazinyl]carbonyl}-1H-
Indole. (6-d)
Prepared from 1-(3-methoxy-phenyl)-piperazine (420 mg, 2.18 mmol)
and 2-(1-Benzyl-1H-indole-3-carbonyl)-1,3-dicyclohexyl-isourea (5), (1000
mg, 2.18 mmol), to give crude 6(d) in quantitative yield. Purified by column
chromatography (EtOAc/ Hexane 1:1) to yield (760 mg, 82%). mp : 107-109
ºC. IRνmax (cm-1): 3032 (C-H arom.), 2927 (C-H aliph.), 1626 (C=O), 1578
868