Journal of Medicinal Chemistry
Article
1-tert-Butyldiphenylsilyloxy-12-azidododec-7(Z)-ene (36).
Diisopropyl azodicarboxylate (DIAD; 1.46 mL, 7.35 mmol) was
added dropwise to a −20 °C solution of PPh3 (2.10 g, 8.0 mmol) in
dry THF (45 mL) under an argon atmosphere. After 10 min, a
solution of 12-(tert-butyldiphenylsilyloxy)dodec-5(Z)-en-1-ol (35)
(3.20 g, 7.35 mmol) in dry THF (10 mL) was added dropwise.
After 30 min, the mixture was warmed to 0 °C and diphenylphos-
phoryl azide (1.58 mL, 7.35 mmol) was added dropwise. After stirring
4 h at rt, the reaction mixture was quenched with water (150 mL) and
extracted with EtOAc (2 × 100 mL). The combined organic extracts
were washed with brine (100 mL), dried (Na2SO4), and concentrated
under reduced pressure. The residue was purified by SiO2 column
chromatography eluting with 4% EtOAc/hexane to afford azide 36
(2.45 g, 72%). TLC: EtOAc/hexanes (1:9), Rf ∼ 0.55. 1H NMR (400
MHz) δ 7.64−7.68 (m, 4H), 7.34−7.42 (m, 6H), 5.28−5.42 (m, 2H),
3.70 (t, J = 5.8 Hz, 2H), 3.27 (t, J = 6.3 Hz, 2H), 1.96−2.10 (m, 4H),
1.24−1.64 (m, 12H), 1.04 (s, 9H). 13C NMR (100 MHz) δ 135.84,
134.41, 130.93, 129.75, 129.12, 127.83, 64.22, 51.62, 32.81, 29.93,
29.30, 28.68, 27.46, 27.14, 27.02, 26.90, 25.96, 19.49. IR (neat) 2930,
2783, 2331, 2097, 1106 cm−1. HRMS calcd for C28H42N3OSi [M + 1]+
464.3097, found 464.3099.
solution of 1-(12-hydroxydodec-5(Z)-enyl)-3-n-pentylurea (39) (0.43
g, 1.38 mmol) in CH2Cl2 (20 mL). After 2 h at room temperature, the
reaction mixture was concentrated in vacuo and the residue was
purified via SiO2 column chromatography to give 1-(12-bromododec-
5(Z)-enyl)-3-n-pentylurea (40) (0.43 g, 83%) as a solid, mp 46.7−46.8
1
°C. TLC: EtOAc/hexanes (2:3), Rf ∼ 0.60. H NMR (300 MHz) δ
5.22−5.42 (m, 2H), 4.40 (br s, 2H), 3.42 (t, J = 9.3 Hz, 2H), 3.10−
3.20 (m, 4H), 1.98−2.10 (m, 4H), 1.80−1.90 (m, 2H), 1.25−1.55 (m,
16H), 0.92 (t, J = 7.2 Hz, 3H). 13C NMR (100 MHz) δ 159.51,
130.14, 129.69, 40.48, 40.39, 34.20, 32.96, 30.34, 29.67, 29.36, 28.58,
28.25, 27.31, 27.27, 27.17, 22.68, 14.26. HRMS calcd for
C18H36BrN2O [M + 1]+ 375.2011, found 375.2014.
1-(12-Cyanododec-5(Z)-enyl)-3-n-pentylurea (41). A mixture
of potassium cyanide (0.23 g, 3.54 mmol) and 1-(12-bromododec-
5(Z)-enyl)-3-n-pentylurea (40) (0.90 g, 2.40 mmol) was stirred in
DMSO (5 mL) at room temperature. After 12 h, the reaction mixture
was diluted with water (20 mL) and extracted with ethyl acetate (2 ×
50 mL). The combined organic extracts were washed with water (2 ×
25 mL), brine (25 mL), dried (Na2SO4), and passed through a silica
gel column to give nitrile 41 (0.62 g, 81%) as a colorless solid, mp 56−
57 °C. TLC: EtOAc/hexanes (2:3), Rf ∼ 0.45. 1H NMR (300 MHz) δ
5.29−5.40 (m, 2H), 4.27 (br s, −NH, 2H), 3.10−3.20 (m, 4H), 2.34
(t, J = 7.0 Hz, 2H), 1.98−2.08 (m, 4H) 1.24−1.70 (m, 18H), 0.89 (t, J
= 7.0 Hz, 3H). 13C NMR (125 MHz) δ 159.41, 129.94, 129.86,
120.14, 40.45, 40.35, 30.30, 29.50, 29.33, 28.70, 28.51, 27.26, 27.16,
25.47, 22.66, 17.28, 14.24. IR (neat) 2930, 2281, 2184, 2042, 1936,
1613, 1197, 1042 cm−1. HRMS calcd for C19H36N3O [M + 1]+
322.2858, found 322.2867.
1-tert-Butyldiphenylsilyloxy-12-aminododec-7(Z)-ene (37).
Triphenylphosphine (1.18 g, 4.50 mmol) was added to a stirring
solution of 1-tert-butyldiphenylsilyloxy-12-azidododec-7(Z)-ene (36)
(1.90 g, 4.10 mmol) in THF (12 mL) containing 10 drops of
deionized water. After 12 h, the reaction mixture was diluted with
CH2Cl2 (10 mL), dried, and concentrated in vacuo to give amine 37
(1.36 g, 76%) as a viscous, colorless oil that was used directly in the
next reaction without further purification. TLC: MeOH/CH2Cl2
N1-n-Butyl-N2-(12-(tert-butyldiphenylsilyloxy)dodec-5(Z)-
enyl)oxalamide (42). A mixture of 2-(n-butylamino)-2-oxoacetic
acid15 (0.40 g, 2.70 mmol), 1-tert-butyldiphenylsilyloxy-12-amino-
dodec-7(Z)-ene (37) (1.20 g, 2.70 mmol), 1-hydroxybenzotriazole
(HOBt; 0.44 g, 3.30 mmol), and [1-(3-(dimethylamino)propyl)-3-
ethylcarbodiimide hydrochloride] (EDCI: 0.63 g, 3.30 mmol) in dry
DMF (5 mL) was stirred at room temperature overnight. The reaction
mixture was quenched with water (30 mL) and extracted into ethyl
acetate (3 × 20 mL). The combined organic extracts were washed with
water (2 × 10 mL) and brine (10 mL), dried, and concentrated in
vacuo. The residue was purified by SiO2 column chromatography to
give N1-n-butyl-N2-(12-(tert-butyldiphenylsilyloxy)dodec-5(Z)-enyl)-
oxalamide (42) (1.10 g, 73%). TLC: EtOAc/hexanes (2:3), Rf ∼
1
(1:4), Rf ∼ 0.25. H NMR (400 MHz) δ 7.62−7.68 (m, 4H), 7.32−
7.40 (m, 6H), 5.30−5.40 (m, 2H), 3.63 (t, J = 5.2 Hz, 2H), 2.62 (t, J =
4.8 Hz, 2H), 1.92−2.06 (m, 4H), 1.40−1.58 (m, 4H), 1.20−1.40 (m,
8H), 1.03 (s, 9H). 13C NMR (100 MHz) δ 135.79, 134.37, 130.42,
129.70, 127.78, 64.19, 42.28, 33.44, 32.77, 29.93, 29.28, 27.40, 27.21,
27.10, 25.92, 19.44. HRMS calcd for C28H44NOSi [M + 1]+ 438.3192,
found 438.3186.
1-(12-(tert-Butyldiphenylsilyloxy)dodec-5(Z)-enyl)-3-n-pen-
tylurea (38). A solution of 1-tert-butyldiphenylsilyloxy-12-amino-
dodec-7(Z)-ene (37) (1.32 g, 3.0 mmol) in THF (5 mL) was added
dropwise to a stirring solution of n-pentyl isocyanate (0.386 mL, 3.0
mmol) in THF (10 mL). After 3 h stirring at room temperature, all
volatiles were removed under reduced pressure and the residue was
purified by SiO2 column chromatography eluting with 20% EtOAc/
hexane to afford urea 38 (1.26 g, 76%) as a viscous oil. TLC: EtOAc/
hexanes (2:3), Rf ∼ 0.40. 1H NMR (300 MHz) δ 7.60−7.70 (m, 4H),
7.35−7.42 (m, 6H), 5.28−5.42 (m, 2H), 5.16 (br s, −NH, 2H), 3.65
(t, J = 6.5 Hz, 2H), 3.08−3.20 (m, 4H), 1.96−2.08 (m, 4H), 1.22−
1.60 (m, 18H), 1.02 (s, 9H), 0.89 (t, J = 7.3 Hz, 3H). 13C NMR (100
MHz) δ 159.23, 135.80, 134.24, 130.52, 129.74, 129.49, 127.82, 64.22,
40.62, 40.54, 32.80, 30.33, 29.95, 29.37, 29.32, 27.46, 27.34, 27.18,
27.11, 25.97, 22.71, 19.46, 14.29. HRMS calcd for C34H55N2O2Si [M +
1]+ 551.4033, found 551.4032.
1
0.55. H NMR (400 MHz) δ 8.05 (br s, −NH, 2H), 7.66−7.74 (m,
4H), 7.32−7.42 (m, 6H), 5.30−5.42 (m, 2H), 3.67 (t, J = 3.9 Hz, 2H),
3.31 (q, J = 5.2 Hz, 4H), 1.96−2.10 (m, 4H), 1.50−1.64 (m, 6H),
1.22−1.44 (m, 10H), 1.06 (s, 9H), 0.92 (t, J = 7.8 Hz, 3H). 13C NMR
(100 MHz) δ 160.33, 135.80, 134.35, 130.73, 129.74, 129.20, 127.83,
64.17, 39.89, 39.69, 32.79, 31.48, 29.94, 29.29, 29.07, 27.46, 27.23,
27.14, 27.0, 25.96, 20.29, 19.46, 13.96. HRMS calcd for C34H53N2O3Si
[M + 1]+ 565.3826, found 565.3824.
N1-n-Butyl-N2-(12-hydroxydodec-5(Z)-enyl)oxalamide (43).
N1-n-Butyl-N2-(12-(tert-butyldiphenylsilyloxy)dodec-5(Z)-enyl)-
oxalamide (42) (1.20 g, 2.12 mmol) was desilylated as described above
for 39 to give N1-n-butyl-N2-(12-hydroxydodec-5(Z)-enyl)oxalamide
(43) (0.568 g, 82%) as a colorless solid, mp 102.8−102.9 °C. TLC:
1-(12-Hydroxydodec-5(Z)-enyl)-3-n-pentylurea (39). A mix-
ture of 1-(12-(tert-butyldiphenylsilyloxy)dodec-5(Z)-enyl)-3-n-penty-
lurea (38) (1.12 g, 2.0 mmol) and tetra-n-butylammonium fluoride
(2.20 mL of 1 M soln in THF, 2.2 mmol) in dry THF (10 mL) was
stirred at room temperature under an argon atmosphere for 12 h and
then evaporated to dryness in vacuo. The residue was dissolved in
EtOAc (50 mL) and washed with water (30 mL), brine (30 mL),
dried, and evaporated in vacuo. Purification of the residue via SiO2
column chromatography gave alcohol 39 (0.56 g, 89%) as a colorless
1
EtOAc/hexanes (7:3), Rf ∼ 0.55. H NMR (400 MHz) δ 7.69 (br s,
2H), 5.20−5.35 (m, 2H), 3.56 (t, J = 4.2 Hz, 2H), 3.26 (q, J = 5.6 Hz,
4H), 2.17 (br s, 1H), 1.95−2.02 (m, 4H), 1.44−1.56 (m, 6H), 1.20−
1.40 (m, 10H), 0.87 (t, J = 7.2 Hz, 3H). 13C NMR (100 MHz) δ
160.15, 130.66, 129.21, 62.98, 39.80, 39.63, 32.93, 31.39, 29.77, 29.18,
28.95, 27.26, 27.0, 26.88, 25.80, 20.18, 13.85. HRMS calcd for
C18H35N2O3 [M + 1]+ 327.2648, found 327.2648.
solid, mp 63.7−63.8 °C. TLC: EtOAc/hexanes (7:3), Rf ∼ 0.30. H
N1-(12-Bromododec-5(Z)-enyl)-N2-n-butyloxalamide (44).
N1-n-Butyl-N2-(12-hydroxydodec-5(Z)-enyl)oxalamide (43) (330 mg,
1.0 mmol) was brominated as described above for 40 to give N1-(12-
bromododec-5(Z)-enyl)-N2-n-butyloxalamide (44) (330 mg, 84%) as
a white solid, mp 46.0−46.3 °C. TLC: EtOAc/hexanes (3:2), Rf ∼
0.55. 1H NMR (400 MHz) δ 7.79 (br s, −NH, 1H), 7.77 (br s, −NH,
1H), 5.20−5.32 (m, 2H), 3.32 (t, J = 6.4 Hz, 2H), 3.22 (q, J = 7.2 Hz,
4H), 1.90−2.00 (m, 4H), 1.72−1.82 (m, 2H), 1.42−1.56 (m, 4H),
1.20−1.40 (m, 10H), 0.85 (t, J = 7.3 Hz, 3H). 13C NMR (100 MHz) δ
1
NMR (300 MHz) δ 5.25−5.42 (m, 2H), 4.48 (br s, −NH, 2H), 3.64
(d, J = 6.5 Hz, 2H), 3.08−3.20 (m, 4H), 1.96−2.14 (m, 4H), 1.22−
1.60 (m, 18H), 0.88 (t, J = 7.0 Hz, 3H). 13C NMR (125 MHz) δ
159.26, 130.23, 129.62, 63.72, 40.33, 40.29, 32.92, 30.30, 30.26, 29.74,
29.35, 29.13, 27.26, 27.20, 27.13, 25.82, 22.69, 14.27. HRMS calcd for
C18H37N2O2 [M + 1]+ 313.2855, found 313.2857.
1-(12-Bromododec-5(Z)-enyl)-3-n-pentylurea (40). CBr4 (0.55
g, 1.66 mmol) and PPh3 (0.43 g, 1.66 mmol) were added to a 0 °C
6969
dx.doi.org/10.1021/jm500262m | J. Med. Chem. 2014, 57, 6965−6972