Beilstein J. Org. Chem. 2012, 8, 1265–1270.
the resulting residue was subjected to silica gel column chroma- CH2Cl2/TFA (6 mL/0.10 mmol) solution was stirred for 12 h at
tography (MeOH/CH2Cl2, 1:99–4:96 as the eluent) to afford the rt. The solvent was removed under reduced pressure, and the
Fmoc-protected precursor 5c as a white foamy solid (402 mg, residue was resuspended in a minimal volume of methanol. The
ESIMS m/z: [M + H]+ 877.9 (100%)). This precursor 5c solution was then treated with an excess of 2 M HCl/diethyl
(200 mg, 0.238 mmol) was then directly deprotected by being ether solution (2 mL, 0.01 mmol) and the solvent evaporated.
stirred in 1 equiv of piperidine/acetonitrile (5 mL per 0.1 mmol The crude product was purified by precipitation from MeOH by
of substrate) for 12 h at rt. The solvent was removed under addition of diethyl ether to yield 2c as an off white solid
reduced pressure, and the crude product was purified by flash (35 mg, 43%). [α]D24 −10.9 (c 3.4, MeOH); 1H NMR (300
column chromatography (silica gel; CH2Cl2/MeOH 15:1) to MHz, CD3OD) δ 0.50 (d, J = 6.4 Hz, 3H), 0.56 (d, J = 6.4 Hz,
afford the desired amine 6c as a white solid (141 mg, 87% two 3H), 0.84–1.02 (m, 2H), 1.03–3.15 (m, 21H), 2.68–2.92 (m,
steps). 1H NMR (500 MHz, CDCl3) δ 1.19–1.44 (m, 16H), 1.30 2H), 2.96–3.20 (m, 2H), 3.91–3.98 (m, 1H), 4.09–4.16 (m, 2H),
(s, 6H, 2CH3 (Pmc)), 2.34 (br s, NH2), 2.10 (s, 3H, CH3 (Pmc)), 4.24–4.36 (m, 1H), 4.42 and 4.54 (ABq, J = 14.6 Hz, 2H), 5.02
2.57 (s, 3H, CH3 (Pmc)), 2.58 (s, 3H, CH3 (Pmc)), 2.61 (t, J = and 5.09 (ABq, J = 12.3 Hz, 2H), 7.06 (t, J = 5.5 Hz, 2H),
6.5 Hz, 2H, CH2 (Pmc)), 3.05–3.29 (m, 2H, CH2N), 3.39–3.50 7.17–7.22 (m, 2H), 7.27–7.36 (m, 7H), 7.44 (d, J = 8.8 Hz, 1H),
(m, 1H, CH (Arg)), 5.06 (ABq, J = 12.6 Hz, 1H), 5.09 (ABq, J 7.53 (d, J = 9.1 Hz, 1H), 7.90 (t, J = 7.0 Hz, 2H), 8.00 (dd, J =
= 12.6 Hz, 1H), 6.41 (s, NH), 7.26–7.41 (m, 5H, ArH), 7.80 (s, 2.3 and 9.1 Hz, 2H), 8.09 (s, NH); 13C NMR (75 MHz,
NH); 13C NMR (125 MHz, CDCl3) δ 12.0, 17.4, 18.4, 21.3, CD3OD) δ 22.5, 22.6, 22.8, 23.0, 25.6, 26.2, 26.3, 27.7, 30.0,
24.5, 25.0, 25.3, 26.7, 26.75, 31.6, 31.9, 32.4, 32.7, 40.5, 54.1, 32.3, 32.9, 33.7, 39.3, 40.3, 42.0, 53.3, 54.3, 60.3, 67.8, 69.0,
57.8, 58.4, 66.7, 73.5, 117.8, 123.9, 127.9, 128.1, 128.4, 133.3, 69.1, 115.9, 116.9, 120.5, 121.7, 124.8, 125.2, 125.9, 126.4,
134.6, 135.3, 135.8, 153.4, 156.3, 174.0, 174.4; ESIMS m/z: 127.5, 127.6, 129.1, 129.2, 129.6, 130.7, 130.9, 131.4, 135.0,
[M + H]+ 656.3 (100%).
135.2, 137.4, 154.0, 155.9, 158.5, 170.7, 173.1, 173.6, 175.4;
ESIMS m/z: [M + H]+ 915.0 (10%), [M + 2H]2+ 457.9 (100);
Benzyl 1-((3R,6R)-3-(3-[(3,4-dihydro-2,2,5,7,8-pentamethyl- HRMS–ESI m/z: [M + H]+ calcd for C53H68N7O7, 914.5175;
2H-1-benzopyran-6-yl)sulfonyl]guanidinopropyl)-9-((S)-2'- found, 914.5130 (100%). HPLC analysis of this compound was
(3-methylbutoxy)-1,1'-binaphth-2-yloxy)-6-(4-(tert-butoxy- also undertaken with a gradient system comprised of H2O
carbonylamino)butyl)-1,4,7-triaza-2,5,8-trioxononan)cyclo- containing 10% CH3CN and 0.1% TFA 90:10:0.5 (A), and
hexanecarboxylate (8c). To a solution of the amine 6c CH3CN containing 0.1% TFA (B). The gradient profile was
(140 mg, 0.213 mmol) in CH3CN (10 mL) at rt was added 0–3 min, linear gradient 0 to 50% B; 4–13 min, linear gradient
HOBt (1.2 equiv), EDCI (1.2 equiv) and the binaphthyl acid 7 50 to 80% of B; 14–15 min, linear gradient 80 to 100% B; tR =
[8] (122 mg, 0.190 mmol). The mixture was stirred for ca. 3 h. 6.1 min, 96% pure.
The solvent was then removed under reduced pressure and the
Determination of minimum inhibitory concen-
resulting residue subjected to silica gel chromatography
(MeOH/CH2Cl2 1:99–4:96 as the eluent) to yield 8c as a white tration (MIC)
solid (163 mg, 67%). [α]D24 −18.6 (c 2.0, MeOH); 1H NMR MIC studies (Table 1) were performed on Staphylococcus
(300 MHz, CDCl3) δ 0.49 (d, J = 6.4 Hz, 3H), 0.54 (d, J = 6.4 aureus wild type (ATCC 6538P), and Staphylococcus epider-
Hz, 3H), 0.66–0.84 (m, 2H), 0.85–1.03 (m, 2H), 1.05–1.62 (m, midis (ATCC 12228) in Mueller–Hinton broth (Oxoid Ltd,
16H), 1.29 (s, 6H), 1.44 (s, 9H), 1.64–1.88 (m, 4H), 1.89–2.14 England) supplemented with 50 mg/L CaCl2. As in [6], MIC
(m, 1H), 2.09 (s, 3H), 2.54–2.64 (m, 2H), 2.55 (s, 3H), 2.57 (s, determinations for clinical isolates of Enterococcus faecium
3H), 2.84–2.96 (m, 2H), 2.97–3.22 (m, 2H), 3.76–3.94 (m, 1H), were conducted by growth in Enterococcosal broth (Becton
4.00–4.07 (m, 2H), 4.36 and 4.54 (ABq, J = 14.6 Hz, 2H), Dickinson Microbiology Systems). Briefly, overnight stationary
4.39–4.48 (m, 1H), 4.78–4.82 (m, NH), 5.06 (s, 2H), 6.14 (br s, phase cultures were diluted 1:1000 into fresh media and then in-
NH) 6.36 (br s, NH), 7.11–7.46 (m, 12H), 7.44 (d, J = 9.1 Hz, cubated with two-fold dilutions of compounds in media, typi-
1H), 7.84 (d, J = 8.9 Hz, 1H), 7.86 (d, J = 7.9 Hz, 1H), 7.92 (d, cally with a highest concentration of 128 µg/mL, in a 96-well
J = 8.8 Hz, 1H), 7.95 (d, J = 7.6 Hz, 1H); ESIMS m/z: plate. Plates were incubated overnight at 37 °C and the MIC
[M + H]+ 1280.3 (100%); HRMS–ESI m/z: [M + H]+ calcd for was recorded as the highest concentration at which bacterial
C72H94N7O12S, 1280.6676; found, 1280.6627.
growth was observed.
Benzyl 1-((3R,6R)-6-aminobutyl-3-(3-guanidinopropyl)-9- Compound 2c (Table 2) was tested at JMI Laboratories through
((S)-2'-(3-methylbutoxy)-1,1'-binaphth-2-yloxy)-1,4,7-triaza- Ordway Research Institute (USA) on Staphylococcus aureus
2,5,8-trioxononan)cyclohexanecarboxylate dihydrochloride (MSSA; MRSA; VISA), S. epidermidis and E. faecium (VRE
(2c). The protected amine 8c (106 mg, 0.083 mmol) in 1:1 and VSE). The microdilution reference methods (M7-A6 (2003)
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