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evaporated in vacuo to give crude 7 (138 mg, quant) as a dark red
solid, which was used without further purification.
EXPERIMENTAL SECTION
■
Synthesis and General Procedures. NMR spectra were
obtained on JEOL JNM-EXC400, JNM-AL400, and JNM-
ALPHA400 spectrometers [1H (400 MHz), 13C (100 MHz)] in a
deuteromethanol (CD3OD) solution using CD2HOD as an internal
standard and a DMSO-d6 solution using DMSO5d as an internal
standard. High-resolution ESI-mass spectra were obtained on a Waters
LCT Premier XE (Waters, Milford MA). HPLC purification was
performed on a system consisting of a JASCO PU-2080 Plus pump
equipped with a JASCO UVIDEC-100-V detector using a Senshu Pak
PEGASIL ODS column (10ϕ × 150 mm) (Senshu Scientific, Tokyo,
Japan). The solvents used for HPLC were obtained from Nakalai
Tesque (Kyoto, Japan) and filtered through a MILLIPORE
OMNIPORE membrane filter (0.45 μm pore size, 47 mm diameter,
Millipore, Billerica, MA) before use. Silica gel column chromatography
was performed on silica gel 60N (spherical, neutral, 63-210 μm, Kanto
Chemical, Tokyo, Japan). Reversed-phase open-column chromatog-
raphy was performed on PEGASIL PREP ODS-7515-12A (Senshu
Scientific). TLC was performed on silica gel plates F254 [0.25 mm
(analytical) and 0.50 mm (preparative)] (Merck, Tokyo, Japan). 4-
Fluororesorcinol was purchased from Sigma-Aldrich (St. Louis, MO).
Synthesis of KMG-104-AsH. 1-(Bis(2,4-dihydroxy-5-
fluorophenyl)methyl)-4-oxo-4H-quinolizine-3-carboxylate Ethyl
Ester (5). A stirred solution of ethyl 1-formyl-4-oxo-4H-quinolizine-
3-carboxylate (compound 4) (284 mg, 1.16 mmol) and 4-
fluororesorcinol (330 mg, 2.58 mmol) in CH2Cl2/Et2O (= 1:1, 6.0
mL) was mixed with methanesulfonic acid (0.48 mL, 8% (v/v) vs
solvent) at room temperature under Ar.18 After the solution was
stirred for 17 h, ice-cold water (30 mL) was added into the mixture in
an ice bath to give a yellow precipitate, and the supernatant was
removed by decantation. The yellow residue was dissolved in MeOH,
and the solution was neutralized by Amberlite IRA-400 (OH−) and a
small amount of saturated NaHCO3 aq to pH 6−7 and filtered. The
filtrate was evaporated in vacuo and purified by silica gel column
chromatography (chloroform−methanol = 7:1) to give 531 mg (95%)
of compound 5 as a yellow powder.
1-(2,7-Difluoro-6-hydroxy-4,5-bis(1,2,3-dithioarsolan-2-yl)-3-oxo-
3H-xanthen-9-yl)-4-oxo-4H-quinolizine-3-carboxylic Acid (1, KMG-
104-AsH). A stirred solution of crude 7 (138 mg) in dry NMP (2.0
mL) was carefully mixed with anhydrous diisopropylethylamine (0.40
mL), arsenic trichloride (0.15 mL, 1.76 mmol), and palladium(II)
acetate (50 mg, 0.23 mmol) under Ar. After being stirred at room
temperature for 18 h, the mixture was poured into 20 mL of 0.5 M
potassium phosphate buffer (pH 6.2)/acetone (3:2) to give a dark red
solution. After the addition of 1,2-ethanedithiol (0.50 mL) and
chloroform (16 mL), the mixture was stirred at room temperature for
30 min. The mixture was diluted with water (30 mL) and extracted
with chloroform (15 mL × 3). The organic layers were combined and
dried with Na2SO4. After evaporation, the crude product was purified
by silica gel chromatography (chloroform−EtOAc = 1:1 + 0.1% TAF
to chloroform−EtOAc = 1:3 + 0.1% TAF). The eluted orange fraction
was concentrated, triturated with 50% EtOH, and filtered. The
obtained pellet was dried overnight on the filter without vacuum19 to
give 15.3 mg (17% in three steps) of the final product 1 as a bright
orange powder.
1: 1H NMR (400 MHz, CDCl3−CD3OD (1:1), rt) 9.18 (1H, d, J =
7.3 Hz), 8.03 (1H, d, J = 1.9 Hz), 7.51 (1H, t, J = 7.3 Hz), 7.07 (1H, d,
J = 9.8 Hz), 6.86 (1H, t, J = 7.3 Hz), 6.50 (2H, d, J = 10.8 Hz), 3.04
(8H, m) ppm; 13C NMR (100 MHz, DMSO-d6, rt) 174.8, 166.4,
160.9, 159.3, 159.1, 158.9, 158.6, 157.4, 151.0, 148.6, 144.5, 140.2,
137.5, 130.0, 124.8, 120.1, 119.6, 117.9, 117.3, 114.3, 112.4, 109.4,
105.3, 104.2, 42.7, 42.6 ppm; HR ESI MS (positive) [M]+ found m/z
767.8420, C27H18NO6S4As2F2 requires 767.8417.
Fluorescent Properties of KMG-104-AsH. A 1 mM solution of
KMG-104-AsH in DMSO was prepared, and 1 μL was added into 1
mL of 10 mM MOPS/KOH (pH 7.3) buffer containing 100 mM KCl,
10 mM MESNa, 3 mM TCEP, 10 μM EDT, MgCl2, CaCl2, or other
ions at varying concentrations, and TCtag peptide (Ac-
FLNCCPGCCMEP) (0 or 1 μM in 50% acetonitrile containing
0.1% TFA). Custom TCtag peptide and its analogues were purchased
from Toray Research Center. Absorbance spectra were recorded on a
U-2001 spectrophotometer (HITACH) using quartz cuvettes.
Fluorescence spectra were recorded in a F-4500 fluorophotometer
(HITACHI) using quartz cuvettes. The excitation wavelength was set
to 505 nm.
5: 1H NMR (CD3OD) 9.48 (1H, d, J = 6.9 Hz), 7.93 (1H, s), 7.90
(1H, d, J = 8.8 Hz), 7.81 (1H, dt, J = 1.5, 6.9 Hz), 7.41 (1H, dt, J = 1.5,
8.3 Hz), 6.47 (2H, dd, J = 2.5, 7.8 Hz), 6.40 (2H, d, J = 12.2 Hz), 6.20
(1H, s), 4.27 (2H, q, J = 6.8, Hz), 1.29 (3H, t, J = 6.8 Hz) ppm; 13C
NMR (CD3OD) 167.6, 157.3, 152.1, 147.8, 146.1, 145.5, 145.2, 145.1,
140.7, 136.0, 130.9, 123.9, 120.7, 120.6, 118.8, 118.3, 118.3, 117.3,
117.1, 105.9, 105.1, 61.7, 38.5, 14.6 ppm; HR ESI MS [M]+ found m/
Determination of the Apparent Dissociation Constant. The
apparent dissociation constant (Kd) of the KMG-104-AsH-TCtag
complex for Mg2+ was calculated as 1.7 mM. To determine the Kd, the
Benesi−Hildebrand plot method was used. The increase in
fluorescence intensity (I − I0) was measured and fitted to the
following equation
z 484.1207, C25H19NO7F requires 484.1208.
2
1-(2,7-Difluoro-6-hydroxy-3-oxo-3H-xanthen-9-yl)-4-oxo-4H-qui-
nolizine-3-carboxylate Ethyl Ester (6, KMG-104 Ethyl Ester). A
solution of 5 (141 mg, 0.29 mmol) in methanesulfonic acid (3 mL)
was heated to 110 °C for 2 h. After the solution was cooled to 0 °C,
cold water (30 mL) was added to give a dark orange solid. The
precipitate was filtered and washed twice with water. The filtrate was
extracted with EtOAc (30 mL) three times, and the combined organic
layer was washed with brine and evaporated in vacuo. The residue was
combined with the dark orange precipitate and purified by silica gel
chromatography (chloroform−methanol = 5:1 to chloroform−
methanol = 5:1 + 0.1% TFA). The dark orange fraction was further
purified with a silica gel preparative TLC plate F254 (0.50 mm,
MERCK) (chloroform−methanol = 4:1 + 0.1% TFA) to give 80.7 mg
of 6 (60%) as a bright orange powder.
1-(2,7-Difluoro-6-hydroxy-3-oxo-3H-xanthen-9-yl)-4-oxo-4H-qui-
nolizine-3-carboxylic acid (2, KMG-104). A stirred solution of 6 (29
mg, 0.062 mmol) in H2O/EtOH = 1:1 (2.5 mL) was mixed with 1.0 M
LiOH aq (0.25 mL) at 0 °C. The mixture was stirred at room
temperature for 1 h, acidified by TFA to pH 5−6, and extracted four
times with EtOAc. The organic layer was evaporated in vacuo to give 2
(15.7 mg, 58%), which was used for the next step without further
purification.
1/(I − I0) = 1/(A[probe − tag complex])
+ 1/(AKd[probe − tag complex]) × 1/([Mg2+])
where I is the measured fluorescence intensity, I0 is the fluorescence
intensity at 0 mM of Mg2+, and A is a constant. Plotting 1/(I − I0) and
1/([Mg2+]), Kd was obtained from the value of (y-intercept)/(slope)
using an approximate line. Fluorescence intensities for the calculation
of Kd are shown in Figure 3.
Gene Construction. The DNA sequence encoding the TCtag
peptide (FLNCCPGCCMEP) was fused to the N′-terminus of actin
by polymerase chain reaction (PCR). The PCR product was
sequenced to ensure fidelity and subcloned into a pcDNA3.1(+)
vector (Invitrogen, Carlsbad, CA) at the KpnI and EcoR I restriction
enzyme sites. mKeima was purchased from Amalgaam (Tokyo, Japan),
and its C′-terminus was fused to the TCtag sequence. To localize
mKeima−TCtag to the MIS, a MIS localization signal was also
conjugated to the N′-terminus of mKeima−TCtag. MIS targeted
mKeima−TCtag was inserted into the pEGFP-N1 vector (Clontech,
Mountain View, CA), exchanging for EGFP, between the EcoR I and
Not I restriction enzyme sites, and mKeima−TCtag was inserted
between the BamH I and Not I sites. The recombinant plasmids were
1-(2,7-Difluoro-6-hydroxy-4,5-bis(trifluoroacetoxymercuri)-3-
oxo-3H-xanthen-9-yl)-4-oxo-4H-quinolizine-3-carboxylic Acid (7). A
mixture of 2 (51 mg, 0.12 mmol) and HgO (50 mg, 0.23 mmol) in
TFA (3.0 mL) was stirred at room temperature overnight and
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dx.doi.org/10.1021/ja410031n | J. Am. Chem. Soc. 2014, 136, 2374−2381