Transition Met Chem (2014) 39:111–118
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Crystal structure determination
fluorescence was recorded [17]. The Stern–Volmer
quenching constant was determined from the equation I0/
I = 1 ? K[Q] [18], where I0 and I are the emission
intensities in the absence and the presence of the complex,
respectively.
The crystallographic data were measured on a Bruker AXS
˚
SMART diffractometer (Mo Ka radiation, 0.71073 A). Data
reduction and cell refinement were performed with the
SMART and SAINT programs. The structures were solved by
direct methods (Bruker SHELXTL) and refined on F2 by full-
matrix least squares (Bruker SHELXTL) using all unique data
[9]. Hydrogen atoms were located geometrically and refined
in riding mode. The non-H atoms were refined with aniso-
tropic displacement parameters. Calculations were performed
using the SHELX-97 crystallographic software package. The
crystallographic data of complex 1 are summarized in
Table 1, and the detailed crystallographic data of complex 2
have been reported in our previous work [12].
Viscosity measurements were carried out using a capil-
lary viscometer at a constant temperature (25.0 0.1 °C).
Each set of data was measured three times, and the averages
are presented as (n/n0)1/3 versus molar ratio of complex to
DNA [19], where n and n0 are the viscosity of DNA in
presence and absence of the complex, respectively. Vis-
cosity values were calculated from the observed flow times
of DNA containing solutions corrected for the flow time in
buffer alone (t0), n = (t - t0) [20]. Flow times were mea-
sured with a digital stopwatch.
DNA binding experiments
Results and discussion
The CT-DNA was dissolved in 100 mL Tris–HCl buffer
(50 mM Tris–HCl, 50 mM NaCl and pH = 7.2). The
concentration of CT-DNA was calculated according to
Beer–Lambert’s Law A = ebc, where e is the molar
extinction coefficient, 6,600 M-1cm-1 (nudeotide)-1 at
260 nm [13]. The absorption ratio A260/A280 was within the
range of 1.8–2.0, indicating that this solution was suffi-
ciently free from protein [14]. The calculated DNA con-
centration was 3.47 9 10–4 M.
Synthesis and characterization
In the IR spectra of the complexes, strong absorption bands
at 1,635 cm-1 for 1 and 1,628 cm-1 for 2 are observed,
which are assigned to the m(C=N) stretching vibrations.
Bands at 1,681 cm-1 for 1 and 1,688 cm-1 for 2 are
attributed to the m(C=O) stretching vibrations, indicating
that there is a CHO group in each complex. The slight
wavelength differences are attributed to the different sub-
stituents (–F in 1, –CH3 in 2). Comparing the IR spectra of
the free ligands and their complexes, the m(N–H) absorp-
tion bands shift from 3,439 cm-1 for the free ligands to
3,209 1 cm-1 for the complexes, consistent with coor-
dination of the nitrogen atoms to the metal. Strong bands at
1,093 1 and 624 cm–1 for the complexes can be attrib-
The UV–vis experiments were carried out at fixed
concentration of the complexes (50 lM) and varying the
concentration of DNA (0–50 lM). Absorption spectra were
recorded using cuvettes of 1 cm path length. Before mea-
surements, the mixtures of DNA and complex were incu-
bated for 30 min at room temperature. The intrinsic
binding constant was determined using the equation [15]:
-
uted to the ClO4 anions [1]. Hence, one spectroscopic
data are in agreement with the crystal structures of the
complexes.
½DNAꢁ=Eap ¼ ½DNAꢁ=E þ 1=ðKbEÞ
where Eap = ea - ef, E = eb - ef, ea, ef and eb correspond
to Aobsd/[Ni], the extinction coefficient for the free com-
plex, and the extinction coefficient for the complex in the
fully bound form, respectively. Plots of [DNA]/(ea - ef)
versus [DNA] gave the binding constant Kb as the ratio of
the slope to the intercept [16].
The UV–Vis spectra (see supporting material S1) of
complexes 1 and 2 both show sharp absorptions at 238 nm,
assigned to p ? p* inter ligand transitions, plus moderate
absorptions at 432 nm for 1 and 429 nm for 2, which may
be due to the d8 configuration of Ni2?, giving rise to a
charge transfer (CT) transition [21].
To further clarify the interactions between these com-
plexes and DNA, the decrease in fluorescence intensity of
the EB–DNA system (EB = ethidium bromide) caused by
intercalation of the complexes has been measured, as
shown in Fig. 7. The experiments were performed at a
fixed EB-DNA solution concentration (2 9 10–5 M EB,
2.87 9 10–5 M DNA), to which increments of the complex
solutions ranging from 0 to 1.2 9 10–4 M were added.
The solutions were equilibrated for 10 min before the
The ES–MS spectra of the complexes in methanol
solution are shown in supporting material S2. The spectra
are dominated by peaks at m/z 445.08 for 1 and 441.08 for
2, corresponding to [NiL1]? (calc. 445.07) and [NiL2]?
(calc. 441.10), respectively, indicating that the two cations
are stable in methanol solution. These assignments are
supported by the good agreement between the theoretical
and experimental isotope distributions, shown in the inset
of the figures.
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