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2
3JC-F =14.5 Hz, C2), 125.7 (d, 4JC-F =2.6 Hz, C6), 105.4 (d, JC-F
=
precipitate was collected by vacuum filtration, and recrystallization
from MeOH gave 2d as colorless crystals (99 mg, 46%): mp: 214–
3
33.4 Hz, C4a), 99.6 (d, JC-F =4.9 Hz, C5), 86.1 (C1’), 79.9 (C4’), 73.1
(C2’), 70.1 (C3’), 63.3 (C5’), 20.7 (CH3), 20.5 (CH3), 20.3 ppm (CH3);
MS (ESI): m/z 396 [M+H]+ (100%).
2168C; UV (MeOH): lmax =274, 236 nm (e=22100, 18900), lmin
=
250, 228 nm (e=12800, 18000); 1H NMR ([D6]DMSO): d=8.35 (s,
1H, H2), 8.19–8.23 (m, 3H, H6, Ph), 7.59 (d, 2H, J=8.6 Hz, Ph), 6.87
(s, 1H, NH), 5.93 (d, 1H, J=5.6 Hz, H1’), 5.47 (d, 1H, J=6.0 Hz, 2’-
OH), 5.35 (“s”, 2H, CH2), 5.21 (d, 1H, J=5.0 Hz, 3’-OH), 5.09 (t, 1H,
J=5.4 Hz, 5’-OH), 4.31 (q, 1H, J=5.5 Hz, H2’), 4.08 (q, 1H, J=
4.6 Hz, H3’), 3.92 (q, 1H, J=3.7 Hz, H4’), 3.62–3.68 (m, 1H, H5’),
3.53–3.58 ppm (m, 1H, H5’’); 13C NMR ([D6]DMSO/D2O): d=152.6,
149.4, 146.7, 144.9, 142.7, 129.4, 128.5 (Ph), 123.5 (Ph), 115.2, 105.0,
87.7 (C1’), 85.8 (C4’), 85.5, 74.6 (C2’), 70.1 (C3’), 61.1 (C5’), 48.8 ppm
(CH2); MS (ESI): m/z 427 [M+H]+ (100%); Anal. calcd for
C19H18N6O6·0.5H2O (435.39): C, 52.41; H, 4.40; N, 19.30; found: C,
52.17; H, 4.29; N, 19.30.
Step c. Freshly distilled Et3N (113 mL, 82 mg, 0.81 mmol) was added
to a stirred suspension of 4 (93 mg, 0.23 mmol) and 4-nitrobenzyla-
mine hydrochloride (67 mg, 0.35 mmol) in MeOH (3 mL), and the
mixture was stirred for 5 h at RT. The volatiles were evaporated in
vacuo, and the residue was purified by column chromatography
(50%, EtOAc/hexane) to give 2’,3’,5’-tri-O-acetyl-4-N-(4-nitrobenzyl)-
tubercidin (5) as a colorless oil (58 mg, 47%): UV (MeOH): lmax
=
1
277 nm, lmin =238 nm; H NMR (CDCl3): d=8.36 (s, 1H, H2), 8.17 (d,
2H, J=8.7 Hz, Ph), 7.51 (d, 2H, J=8.7 Hz, Ph), 7.12 (d, 1H, J=
3.77 Hz, H6), 6.42–6.46 (dd, 2H, J=3.8, 6.0 Hz, H1’, H5), 5.73 (t, 1H,
J=5.8 Hz, H2’), 5.54–5.59 (m, 2H, H3’, NH), 4.95 (d, 2H, J=6.1 Hz,
CH2), 4.31–4.40 (m, 3H, H4’, H5’, H5’’), 2.14 (s, 6H, 2ꢁCH3),
2.04 ppm (s, 3H, CH3); 13C NMR (CDCl3): d=170.4, 169.7, 169.5 (3ꢁ
C=O), 156.0 (C4), 152.3 (C2), 150.8 (C7a), 147.3 (Ph), 146.7 (Ph),
128.0 (Ph), 123.9 (Ph), 121.5 (C6), 103.8 (C4a), 99.4 (C5), 85.4 (C1’),
79.5 (C4’), 73.1 (C2’), 70.8 (C3’), 63.5 (C5’), 44.2 (CH2), 20.8 (CH3),
20.6 (CH3), 20.4 ppm (CH3); MS (ESI): m/z 528 [M+H]+ (100%).
6-N-[N-phenylcarbamoyl]adenosine (9a)
Step a. A solution of phenyl isocyanate (35 mL, 39 mg, 0.32 mmol)
and 2’,3’,5’-tri-O-acetyladenosine (7; 106 mg, 0.27 mmol) in CH2Cl2
(5 mL) was stirred at RT under N2 for 48 h. An additional portion of
phenyl isocyanate (35 mL, 39 mg, 0.324 mmol) was then added,
and stirring was continued for 20 h (total reaction time: 68 h). The
reaction mixture was partitioned between saturated aq NaHCO3
(25 mL) and CHCl3 (25 mL), and the organic layer was dried
(Na2SO4), filtered, and concentrated in vacuo. Purification by
column chromatography (70%, EtOAc/hexane) gave 2’,3’,5’-tri-O-
Step d. A saturated (at 08C) solution of NH3 in MeOH (5 mL) was
added to a stirred solution of 5 (54 mg, 0.1 mmol) in MeOH (1 mL),
and the mixture was stirred at RT for 20 h. The volatiles were
evaporated in vacuo, and the residue was purified by column chro-
matography (2!4% gradient, EtOAc/iPrOH/H2O (4:1:2) in EtOAc)
to give 2b as a yellow oil (35 mg, 85%): see method A for charac-
terization data.
acetyl-6-N-[N-phenylcarbamoyl]adenosine (8a) as
a pale-yellow
1
solid (111 mg, 80%): H NMR (CDCl3): d=11.89 (s, 1H, NH), 9.40 (s,
1H, NH), 8.62 (s, 1H, H2), 8.56 (s, 1H, H8), 7.63 (“d”, 2H, J=7.6 Hz,
Ph), 7.35 (“t”, 2H, J=7.9 Hz, Ph), 7.11 (“t”, 1H, J=7.4 Hz, Ph), 6.25
(d, 1H, J=5.4 Hz, H1’), 6.03 (t, 1H, J=5.5 Hz, H2’), 5.69 (“dd”, 1H,
J=4.4, 5.4 Hz, H3’), 4.37–4.48 (m, 3H, H4’, H5’, H5’’), 2.15 (s, 3H,
CH3), 2.08 (s, 3H, CH3), 2.07 (s, 3H, CH3).
5-Carboxamido-4-(4-nitrobenzylamino)-7-(b-d-ribofuranosyl)-
pyrrolo[2,3-d]pyrimidine (2c): Sangivamycin (1b; 155 mg,
0.5 mmol) was treated with 4-nitrobenzyl bromide (162 mg,
1.5 mmol) for 26 h at 408C as described for the conversion of
1a!2a. The alkylated intermediate was then dissolved in MeOH
(12 mL), treated with Me2NH in THF (2m, 6 mL), and stirred for 45 h
at RT. The reaction was then treated with additional Me2NH in THF
(2m, 2 mL), and the mixture was heated at reflux while stirring for
32 h (total reaction time: 77 h). TLC showed ~80% conversion to
the less polar product (2c). Volatiles were evaporated in vacuo to
give a yellow solid. Recrystallization from EtOH gave 2c as off-
white crystals (101 mg, 45%): mp: 154–1588C (dec.); UV (MeOH):
lmax =286 nm (e=23100), lmin =229 nm (e=8700); 1H NMR
([D6]DMSO): d=10.29 (t, 1H, J=6.0 Hz, NH), 8.17–8.21 (m, 4H, Ph,
H2, H6), 8.11 (s, 1H, CONH2), 7.59 (br d, 2H, J=8.8 Hz, Ph), 7.47 (s,
1H, CONH2), 6.06 (d, 1H, J=6.0 Hz, H1’), 5.43 (d, 1H, 2’-OH, J=
6.3 Hz), 5.20 (d, 1H, J=5.0 Hz, 3’-OH), 5.09 (t, 1H, J=5.8 Hz, 5’-OH),
4.90 (“d”, 2H, J=6.2 Hz, CH2), 4.37 (q, 1H, J=5.8 Hz, H2’), 4.10 (“q”,
1H, J=4.5 Hz, H3’), 3.93 (q, 1H, J=4.0 Hz, H4’), 3.61–3.67 (m, 1H,
H5’), 3.53–3.58 ppm (m, 1H, H5’’); 13C NMR ([D6]DMSO): d=166.5,
156.5, 152.6, 150.4, 148.0, 146.4, 128.0 (Ph), 125.7, 123.6, 110.9,
101.7, 87.2 (C1’), 85.3 (C4’), 73.9 (C2’), 70.5 (C3’), 61.9 (C5’),
42.9 ppm (CH2); MS (ESI): m/z 445 [M+H]+ (100%); Anal. calcd for
C19H20N6O7·1.5 H2O (471.42): C, 48.41; H, 4.92; N, 17.83; found: C,
48.59; H, 4.66; N, 17.65.
Step b. A saturated (at 08C) solution of NH3 in MeOH (6 mL) was
added to a solution of 8a (103 mg, 0.2 mmol) in MeOH (3 mL), and
the mixture was stirred at RT for 2 h. The volatiles were evaporat-
ed, and the residual solid was recrystallized from MeOH to give 9a
as a white powder (66 mg, 85%): mp: 193–1958C; UV (MeOH):
lmax =279 nm (e=28250), lmin =241 nm (e=9200); 1H NMR
([D6]DMSO): d=11.76 (s, 1H, NH), 10.17 (s, 1H, NH), 8.72 (s, 1H,
H2), 8.69 (s, 1H, H8), 7.63 (d, 2H, J=7.7 Hz, Ph), 7.36 (t, 2H, J=
7.9 Hz, Ph), 7.10 (t, 1H, J=7.4 Hz, Ph), 6.01 (d, 1H, J=5.6 Hz, H1’),
5.54 (d, 1H, J=6.0 Hz, 2’-OH), 5.24 (d, 1H, J=5.0 Hz, 3’-OH), 5.14 (t,
1H, J=5.5 Hz, 5’-OH), 4.61 (q, 1H, J=5.6 Hz, H2’), 4.19 (q, 1H, J=
4.7 Hz, H3’), 3.99 (q, 1H, J=3.8 Hz, H4’), 3.67–3.73 (m, 1H, H5’),
3.55–3.61 ppm (m, 1H, H5’’); 13C NMR ([D6]DMSO): d=150.83 (C=
O), 150.81 (C2), 150.6, 150.0, 142.4 (C8), 138.4, 128.9 (Ph), 123.2
(Ph), 120.6, 119.4 (Ph), 87.7 (C1’), 85.7 (C4’), 73.8 (C2’), 70.3 (C3’),
61.3 ppm (C5’); MS (ESI): m/z 387 [M+H]+ (100%); Anal. calcd for
C17H18N6O5·0.5H2O (395.37): C, 51.64; H, 4.84; N, 21.26; found: C,
51.38; H, 4.77; N, 21.02.
6-N-[N-(4-Methoxyphenyl)carbamoyl]adenosine (9b)
Step a. A solution of 7 (197 mg, 0.5 mmol) and 4-methoxyphenyl
isocyanate (78 mL, 90 mg, 0.6 mmol) in CH2Cl2 (5 mL) was stirred at
RT under N2 for 12 h. Additional 4-methoxyphenyl isocyanate
(78 mL, 90 mg, 0.6 mmol) was then added, and stirring was contin-
ued for 12 h (total reaction time: 24 h). The reaction mixture was
partitioned between saturated aq NaHCO3 (25 mL) and CHCl3
(25 mL), and the organic layer was dried (Na2SO4), filtered, and con-
centrated in vacuo to give 2’,3’,5’-tri-O-acetyl-6-N-[N-(4-methoxy-
phenyl)carbamoyl]adenosine (8b) as a pale-yellow solid of suffi-
cient purity for NMR characterization and use in the next step
5-Cyano-4-(4-nitrobenzylamino)-7-(b-d-ribofuranosyl)pyrrolo[2,3-
d]pyrimidine (2d): Toyocamycin (1c; 146 mg, 0.5 mmol) was
heated with 4-nitrobenzyl bromide (364 mg, 1.5 mmol) in dried
DMF (3 mL) at 408C for 63 h (TLC showed ~85% conversion to
a less polar product). The volatiles were evaporated under vacuum
(<408C) to ~1 mL, and this material was added dropwise to vigo-
rously stirred dry acetone (20 mL). Et2O (40 mL) was added to the
stirred suspension, which was then chilled at 08C for 20 min. The
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