Analogues of Methotrexate in RA. 1
J ournal of Medicinal Chemistry, 1997, Vol. 40, No. 3 375
C10-H), 3.85 (s, 3H, COOCH3), 3.75 (m, 4H C9H + COOCH3),
3.38 (m, C9H), Anal. (C17H17N7O4‚1.7H2O) C, H (0.75), N.
Meth yl 6-[r-ca r bom eth oxy-r-[(2,4-d ia m in o-6-p ter id i-
n yl)m eth yl]p r op yl]p yr id in e-3-ca r boxyla te (5Bb): simi-
larly obtained from 3B in 78% yield as a yellow solid; MS m/ e
412 (M + H); NMR (DMSO-d6) δ 9.04 (s, 1H, C7-H), 8.23 (m,
2H, pyr 2′-H + pyr 4′-H), 7.45 (d, 1H, pyr 5′-H), 6.62 (br s, 2H,
A solution of the monocarboxylic acid 6C (0.99 g, crude) in
40 mL of dimethyl sulfoxide was stirred at 130° for 30 min.
HPLC showed disappearance of the starting carboxylic acid
6C (retention time 4.4 min) and the desired monoester to be
present (retention time 15.2 min). The solution was concen-
trated under high vacuum, and the residue was washed with
ether and water. The orange solid was collected and dried in
vacuo at room temperature to afford 505 mg (64%): NMR
(CDCl3) δ 8.60 (m, 2H, C7-H, 6′-H), 8.10 (d, 1H, 3′-H), 7.85 (d,
1H, 5′-H), 7.20 (m, 3H, NH2), 4.00 (s, 3H, OCH3), 3.35 (s, 4H,
CH2CH2); MS m/ e 325 (M + H).
5-[â-(2,4-Dia m in o-6-p t er id in yl)et h yl]p yr id in e-2-ca r -
boxylic Acid (7Ca ). A mixture of the ester 7C (0.49 g, 1.5
mmol) in 2-methoxyethanol (5 mL) was treated with water (5
mL) and then 10% NaOH (2.5 mL). HPLC analysis indicated
saponification was complete after the resulting red solution
had been stirred for 45 min. The solution was neutralized (pH
7.5) with 2 N HCl and concentrated under high vacuum. The
resulting residue was treated with water and stirred. Filtra-
tion gave 0.27 g of product as an orange solid (57%): HPLC
showed 96% purity; MS m/ e 527 (TMS3). Anal. (C14H13N7O2‚0.
8HCl) C, H, N.
Dieth yl N-5-[â-(2,4-Dia m in o-6-p ter id in yl)eth yl]-2-th en -
oyl]-L-glu ta m a te (8Aa ). A solution of the carboxylic acid 7Aa
(0.7 g, 2.2 mmol) in dry DMF (40 mL) was treated with
triethylamine (2.1 g, 21.0 mmol) and stirred at room temper-
ature for 1.25 h. Isobutyl chloroformate (0.63 g, 4.6 mmol)
was added, and the mixture was stirred at room temperature
for 2 h. Isobutyl chloroformate (0.32 g, 2.3 mmol) was again
added, and the mixture was stirred for 1 h followed by addition
of LL-glutamic acid diethyl ester hydrochloride (0.55 g, 2.3
mmol); stirring was continued for another 1 h. The process
was repeated again, and the mixture was stirred at room
temperature overnight. Concentration under high vacuum
gave a dark residue that was washed repeatedly with Et2O.
The residue was then washed with dilute NH4OH, and then
H2O. The resultant orange solid was dried in vacuo. Chro-
matography on flash silica gel (2.5% MeOH in CHCl3) gave
the product as a yellow powder: 0.32 g (32%); mp 206-208
°C; NMR (DMSO-d6 + CDCl3) δ 8.5 (s, 1H, C7-H), 8.31 (d, 1H,
NHC), 7.6 (d, 1H, 3′-H), 6.80 (d, 1H, 4′-H), 6.32 (br s, 2H, NH2),
4.54 (m, 1H, CHNH), 4.18 (m, 4H, 2 × OCH2), 3.28 (m, C9-
H2); 2.42 (t, 2H, Glu C4-H2); 2.13 (m, 2H, Glu C3-H2); 1.28 (m,
6H, 2 × CH3CH2); MS m/ e 502 (M + H). Anal. (C22H27N7O5S‚
H2O) C, H, N.
NH2), 3.87 (s, 3H, ArCOOCH3), 3.62 (m, 5H, C10-COOCH3
+
C9-H2); 2.01 (m, 2H, CH2CH3), 0.80 (t, 3H, CH3CH2). Anal.
(C19H21N7O4‚1.5H2O) C, H, N.
Meth yl 5-[r-[(ben zh yd r yloxy)ca r bon yl]-â-(2,4-dia m in o-
6-p ter id in yl)eth yl]p yr id in e-2-ca r boxyla te (5C): prepared
in a similar manner from 4C in 75% yield as a yellow powder;
NMR (CDCl3) δ 8.80 (m, 1H, C7-H), 8.62 (s, 1H, C3′-H), 8.10
(d, 1H, C6′-H), 7.84 (m, 1H, C4′-H), 7.20 (m, 12H, 2 × C6H5
+
NH2), 6.80 (s, 1H, OCH), 5.20 (br s, 2H, NH2), 4.55 (m, 1H,
C10-H), 4.02 (s, 3H, OCH3), 3.85 (m, 1H, C9-H), 3.30 (m, 1H,
C9-H).
5-[r-Car boxy-â-(2,4-diam in opter idin yl)eth yl]th ioph en e-
2-ca r boxylic Acid (6Aa ). A solution of the diester 5Aa (1.96
g, 5.05 mmol) in 30 mL of 2-methoxyethanol and 30 mL of 2.5
N NaOH was stirred for 1.5 h. The mixture was filtered, and
the filtrate was neutralized (pH 7) with HOAc and concen-
trated under high vacuum. The residue was suspended in
water (30 mL) and adjusted with HOAc to pH 5 to produce a
precipitate. Filtration gave a tan solid that was digested in
95% EtOH and filtered to give a tan solid that was washed
with Et2O and dried in vacuo, yielding 1.31 g (77%) of
product: HPLC showed 92.2% purity; NMR (DMSO-d6) δ 8.51
(s, 1H, C7-H), 7.55 (br s, 2H, NH2), 7.17 (d, 1H, 3′-H), 6.81 (d,
1H, 4′-H), 6.55 (br s, 2H, NH2), 4.40 (t, 1H, C10-H), 3.15 (m,
2H, C9-H2).
5-[â-(2,4-Dia m in o-6-p ter id in yl)eth yl]th iop h en e-2-ca r -
boxylic Acid (7Aa ). A solution of the dicarboxylic acid 6Aa
(1.31 g, 3.64 mmol) in argon-purged DMSO was placed in a
135 °C oil bath for 45 min. The solution was then concentrated
under high vacuum to a residue that was digested in Et2O
(50 mL). Filtration yielded a brown solid that was washed
with ether and dried in vacuo to give 1.31 g of crude product.
The material was suspended in water (75 mL) and treated
dropwise with 1.5 N NH4OH to pH 12. Insoluble material was
removed by filtration and the filtrate adjusted to pH 5 with
HOAc to give a precipitate. Filtration gave a brown solid that
was washed with H2O and dried in vacuo, yielding 0.97 g of
product (84%): UV (0.1 N NaOH) 257 nm (ꢀ 25 305), 372
(6491). Anal. (C13H12N6O2S‚H2O) C, H, N.
5-[r-[(2,4-Diam in o-6-pter idin yl)m eth yl]pr opyl]-2-th en o-
ic Acid (7Ab). The diester 5Ab was saponified via the above
procedure used to prepare 6Aa to yield (58%) 6Ab as a cream-
colored solid: HPLC 97% purity. The material was im-
mediately decarboxylated by heating a solution in DMSO at
125° for 30 min to afford the R-ethylpteroate analogue 7Ab in
70% yield: UV (0.1 N NaOH) 256 nm (ꢀ 28 546), 372 (7300);
MS (DCl-NH3) m/ e 561 (TMS3) corresponds to 345 (M + 1).
Anal. (C15H16N6O2S‚0.6H2O) C, H, N.
6-[â-(2,4-Dia m in o-6-p t er id in yl)et h yl]p yr id in e-3-ca r -
boxylic Acid (7Ba ). Saponification of the diester 5Ba
afforded the diacid 6Ba in 97% yield; HPLC showed 95.3%
purity. The material was directly decarboxylated by heating
a solution in DMSO at 110 °C for 25 min to give 7Ba in 94%
yield as a yellow solid: MS m/ e 527 (TMS3) corresponds to
311 (M + 1). Anal. (C14H13N7O2‚2H2O) C (0.6), H, N.
6-[r-[(2,4-Diam in o-6-pter idin yl)m eth yl]pr opyl]pyr idin e-
3-ca r boxylic Acid (7Bb). Similar hydrolysis of the diester
5Bb gave the diacid 6Bb in 27% yield as a tan solid.
Decarboxylation was effected by allowing a solution in DMF
to stand at room temperature for 20 min to afford 7Bb in 99%
yield; HPLC showed 90% purity.
The other L-glutamate diesters were similarly prepared from
the corresponding “pteroic acid” intermediates.
Dieth yl N-[5-[r-[(2,4-d ia m in o-6-p ter id in yl)m eth yl]p r o-
p yl]-2-th en oyl]-L-glu ta m a te (8Ab): 20% yield from 7Ab,
yellow foam; NMR (CDCl3) δ 0.90 (t, 3H, C10-CH2-CH3), 1.30
(m, 6H, 2 × OCH2CH3), 2.17 (m, 2H, Glu C3-H2); 2.47 (m, 2H,
Glu C4-H2), 3.20 (m, 3H, C9-H2 + C10-H), 4.16 (m, 4H, 2 ×
OCH2), 4.75 (m, 1H, CHNH), 5.45 (br s, NH), 6.55 (m, 1H, C4′-
H), 6.95 (m, 1H, NHCH), 7.30 (d, 1H, C3′-H), 8.41 (d, 1H, C7H).
Anal. (C24H31N7O5S‚0.7H2O) C, H, N.
Dieth yl N-[6-[â-(2,4-d ia m in o-6-p ter id in yl)eth yl]n ico-
tin oyl]-L-glu ta m a te (8Ba ): 50% yield from 7Ba , yellow
crystals from EtOH; MS m/ e 497 (M + H); NMR (DMSO-d6)
δ 8.90 (d, 1H, NHCO), 8.87 (d, 1H, pyr 6′-H), 8.61 (s, 1H, C7-
H), 8.10 (m, 1H, pyr 4′-H), 7.70 (br d, 1H, NH), 7.42 (d, 1H,
pyr 3′-H), 6.65 (br s, 2H, NH2), 4.40 (m, 1H, CHN), 4.05 (m,
4H, 2 × OCH2), 3.30 (CH2CH2 + H2O), 2.45 (t, 2H, CH2CO2),
2.05 (m, 2H, CH2CH), 1.70 (t, 6H, 2 × CH3). Anal. (C23H28N8O5‚
H2O) C, H, N.
Dieth yl N-[6-[r-[(2,4-d ia m in o-6-p ter id in yl)m eth yl]p r o-
p yl]n icotin oyl]-L-glu ta m a te (8Bb): 48% from 7Bb, yellow
foam; MS m/ e 525 (M + H); NMR (CDCl3) δ 9.01 (br s, 1H,
pyr 6′-H), 8.45 (br s, 1H, 7-H), 7.97 (d, 1H, pyr 4′-H), 7.35 (br
s, 2H, NH2), 7.08 (d, 1H, pyr 3′-H), 5.38 (br s, 2H, NH2), 4.75
Meth yl 5-[â-(2,4-Dia m in o-6-p ter id in yl)eth yl]p yr id in e-
2-ca r boxyla te (7C). A mixture of the diester 5C (1.29 g, 2.4
mmol) in dichloromethane (67 mL) was treated with 99%
trifluoroacetic acid (33 mL). The yellow solution was kept at
room temperature for 50 min and then concentrated at room
temperature under high vacuum. The residue was washed
repeatedly with ether and then dried in vacuo giving a bright
yellow solid. This was suspended in water and neutralized to
pH 8 with 1.5 N ammonium hydroxide. The mixture was
concentrated under high vacuum giving a yellow solid, 0.99 g.
HPLC showed the conversion to 6C.
(m, 1H, CHN), 4.19 (m, 4H, 2 × OCH2), 3.32 (m, 3H, C9-H2
+
C10-H), 2.50 (m, 2H, C10-CH2-CH3), 2.23 (m, 4H, Glu C4-H2
+
Glu C3-H2); 1.26 (m, 6H, 2 × OCH2CH3), 0.83 (t, 3H, C10
CH2CH3).
-
Dieth yl N-[5-[â-(2,4-d ia m in o-6-p ter id in yl)eth yl]p icoli-
n oyl]-L-glu ta m a te (8Ca ): 18% from 7Ca , yellow foam; MS
m/ e 497 (M + H); NMR (CDCl3) δ 8.60 (d, 1H, C7-H), 8.55 (d,
1H, NH), 8.43 (d, 1H, C5′-H), 8.06 (d, 1H, C2-H), 7.70 (m, 1H,
C6′-H), 4.80 (m, 1H, CHNH), 4.20 (m, 4H, 2 × OCH2), 2.30 (m,