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ARTICLE
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reaction mixture was kept overnight with stirring at room 5’‐isomer); 37.5 (NCH3, 4’‐isomer); 46.7 (CH2CH3‐rhodamine 5’‐
temperature. Methanol (50 mL) was added and the mixture isomer, 4’‐isomer); 74.7 (CH2C6H5, 5’‐isDoOmI:e1r0);.107349./9C5(MCDH020C465H65J,
was stirred for 1 h. The solid product that formed was 4’‐isomer); 97.1 (C4 + C5, 5’‐isomer, 4’‐isomer); 114.8 (CH);
removed by filtration and the solvent was removed under 114.9 (C2 + C7, 5’‐isomer, 4’‐isomer); 119.2 (C5’’, 5’‐isomer, 4’‐
reduced pressure to afford the crude product. Recrystallization isomer); 129.4 (CH); 129.5 (C6’, 5’‐isomer); 129.6 (C5’, 4’‐
of the crude product from methanol/acetone (1:9) afforded isomer); 129.7 (CH); 129.8 (C4’, 5’‐isomer); 130.0 (CH o‐C6H5);
the hydrochloride salt MRH10 (0,0224g, 61%) as a purple solid 130.2 (C3’, 4´‐isomer); 131.0 (C3’, 5’‐isomer); 132.9 (C1 + C8,
(5’‐isomer). Elemental analysis for (C62H77N11O13S4+.4Cl‐ 5’‐isomer, 4’‐isomer); 133.1 (CH); 133.7 (Cq, 5’‐isomer); 135.6
.11HCl.6H2O): Calculated (found): C 39.88 (39.71); H 5.40 (Cq); 136.4 (Cq); 136.8 (C4’, 4’‐isomer); 138.4 (Cq C6H5, 5’‐
(5.10); N 8.25 (8.21). MS: calculated for C62H74N11O13S+.K+: isomer); 138.5 (Cq C6H5, 4’‐isomer); 142.3 (Cq); 143.1 (C2’’ 5’‐
1251.48
[M+.K+];
found:
matrix‐assisted
laser isomer); 143.3 (C2’’ 4’‐isomer); 145.0 (C5’, 5’‐isomer); 147.6
desorption/ionization time of flight MS: 1251.40 [M+.K+]. 1H (C5’’, 5’‐isomer); 147.7 (C3’’, 4’‐isomer); 151.0 (C2’’, 5’‐
NMR (400.15 MHz, MeOD‐d4, ppm): δ 1.95 (m, 6H, CCH2CH2); isomer); 151.1 (C6’’, 4’‐isomer); 156.9 (C9); 159.3 (C4a, 4’‐
2.22 (m, 6H, CCH2CH2); 2.63 (s, 9H, 6’’‐CH3); 3.02 (m, 2H, isomer); 159.4 (C4a, 5’‐isomer); 162.0 (C1’, 5’‐isomer); 162.2
NCH2CH2CO); 3.31 (s, 12H, CH3‐rhodamine); 3.97 (s, 9H, NCH3); (C1’, 4’‐isomer); 168.6 (CONH, 5’‐isomer); 169.1 (CONH, 4’‐
4.52 m, 2H, NCH2CH2CO); 4.65 (s, 6H, CH2NH); 7.01 (s, 3H, isomer); 172.3 (2’‐CO2H, 5’‐isomer); 172.5 (2’‐ CO2H, 4’‐
H5’’); 6.86‐7.38 (m, 6H, H1 – H8); 7.64‐8.49 (m, 3H, H3’‐ H6’). isomer);175.0 (C4’’, 5’‐isomer); 175.1 (C4’’, 4’‐isomer).
13C NMR (100.62 MHz, MeOD‐d4, ppm): δ 21.3 (2’’‐CH3); 30.6
(CCH2CH2); 31.0 (CCH2CH2); 35.7 (NCH2CH2CO); 36.3 (CH2NH); MRB9. Compound
2
(37.7 mg, 5.50×10‐4 mol) was dissolved in
40.0 (NCH3); 41.1 (CH3‐rhodamine); 44.5 (NCH2CH2CO); 97.5 anhydrous dichloromethane (8 mL), under argon and cooled to
(C4, C5); 114.2 (C5”); 117.9, 123.8, 124.2, 129.2, 132.0 (C1 – 0ºC. BCl3 (0.8 mL) was added dropwise and the reaction
C8); 132.5, 133.5, 134.8 (C3’‐ C6’); 140.8 (C2’’); 144.8 mixture was kept overnight with stirring at room temperature.
(C3’’);150.9 (C4’’); 159.0 (C4a, C5a); 161.2 (C6”); 176.3 Methanol (30 mL) was added and the mixture was stirred for 1
(CH2CONHCH2). UV‐Vis (λmax / nm) 552; ε = 3.2 x 104 mol‐1 dm3 h. The solid product that formed was removed by filtration and
cm‐1; Fluorescence (λmax / nm) 575.
the solvent was removed under reduced pressure to afford the
crude product. Recrystallization of the crude product from
Compound 2. To
a
solution of 5(6)‐carboxytetraethyl‐ methanol/acetone (4:6) afforded the hydrochloride salt MRB9
rhodamine (F9) (168.6 mg, 3.46×10‐4 mol) in anhydrous DMF (37.1 mg, 82%) as a purple solid. Elemental analysis for
(10 mL), 3,4‐HPO bidentate unit (73.3 mg; 2.84×10‐4 mol), DCC (C38H46N4O62+.2Cl‐.CHCl3): Calculated (found): C 55.43 (55.03);
(73.0 mg, 3.50×10‐4 mol) and N‐hydroxysuccinimide (47.7 mg, H 5.61 (5.07); N 6.63 (6.52). MS: calculated for C38H45N4O6 :
40.2×10‐4 mol) were added and the mixture was stirred at 653.33 [M+]; found: ESI ‐ MS: 653.2952 [M+]. H NMR (400.15
+
1
room temperature in the dark and under an argon MHz, MeOD‐d4, ppm): δ 1.31 (t, J 6.7, 24 H, 8× CH2CH3‐
atmosphere, for 2 days. Subsequently, the formed N,N‐ rhodamine 5’‐isomer, 4’‐isomer); 2.63 (s, 3H, 6’’ ‐CH3, 5’‐
dicyclohexylurea (DCU) precipitate was filtered off and the isomer); 2.68 (s, 3H, 6’’ ‐CH3, 4’‐isomer); 3.68 (q, J 6.7, 16H,
solvent removed under reduced pressure. The product was 8×CH2CH3‐rhodamine 5’‐isomer, 4’‐isomer); 4.08 (s, 3H, NCH3,
purified by gradient flash column chromatography, eluting 5’‐isomer); 4.15 (s, 3H, NCH3, 4’‐isomer); 4.97 (s, 2H, CH2NH,
with methanol/chloroform (2:8) to afford
2 (52.5 mg; 25%) as 5’‐isomer); 5.06 (s, 2H, CH2NH, 4’‐isomer); 7.02‐7.11 (m, 9H,
a purple solid. Compound was obtained as a 1.1:1 ratio H5’’, 5’‐isomer, 4’‐isomer + H1, H2, H4, H5, H7, H8); 7.55 (d, J
2
mixture of 4’‐ and 5’‐ isomers as determined through NMR 5.7 Hz, 1H, H6’, 4’‐isomer); 7.88 (br s, 1H, H6’, 5’‐isomer); 8.27
spectra analysis. 1H NMR (400.15 MHz, MeOD‐d4, ppm): δ 1.28 (br s, 1H, H4’, 5’‐isomer); 8.33 (br s, 1H, H5’, 4’‐isomer); 8.41
(t, J 6.9, 24 H, 8× CH2CH3‐rhodamine 5’‐isomer, 4’‐isomer); (br s, 1H, H3’, 5’‐isomer); 8.82 (s, 1H, H3’, 4’‐isomer).13C NMR
2.39 (s, 3H, 6’’‐CH3, 5’‐isomer); 2.45 (s, 3H, 6’’‐CH3, 4’‐isomer); (100.62 MHz, MeOD‐d4, ppm): δ 12.8 (CH2CH3‐rhodamine, 5’‐
3.65 (m, 11H, NCH3, 5’ isomer + 8×CH2CH3‐rhodamine 5’‐ isomer, 4’‐isomer); 21.3 (6’’‐CH3, 5’‐isomer, 4’‐isomer); 37.2
isomer, 4’‐isomer); 3.72 (s, 3H, NCH3, 4’‐isomer); 4.66 (s, 2 H, (CH2NH, 5’‐isomer); 37.3 (CH2NH, 4’‐isomer); 40.0 (NCH3, 5’‐
CH2NH, 5’‐isomer); 4.74 (s, 2H, CH2NH, 4’‐isomer); 5.15 (s, 2H, isomer, 4’‐isomer); 46.9 (CH2CH3‐rhodamine, 5’‐isomer, 4’‐
CH2C6H5, 5’‐isomer); 5.23 (s, 2H, CH2C6H5, 4’‐isomer); 6.45 (s, isomer); 97.3 (C5’’); 114.2 (C4); 114.6 (C5); 114.7 (C2); 115.5
1H, H5’’, 5’‐isomer); 6.51 (s, 1H, H5’’, 4’‐isomer); 6.90 (d, J 2.5 (C7); 130.4 (C4’, 5’‐isomer); 130.6 (C6’, 5’‐isomer); 131.6 (C3’,
Hz, 4H, H4 + H5 4’‐isomer, 5’‐isomer); 6.99 (br s, 4H, H2 + H7, 4’‐isomer); 132.1(C1); 132.2 (C6’, 4’‐isomer); 132.4 (C8); 132.6
5’‐isomer, 4’‐isomer); 7.21‐7.40 (m, 13H, H1 + H8 + m‐, p‐ C6H5 (C5’, 4’‐isomer); 132.9 (C3’, 5’‐isomer); 135.3 (C2’, 5’‐isomer);
5’‐isomer, 4’‐isomer + H6’, 4’‐isomer, + o‐ C6H5, 5’‐isomer); 135.6 (C5’, 5’‐isomer); 136.4 (C2’, 4‐isomer); 138.2 (C1’, 5’‐
7.46‐7.48 (m, 2H, o‐ C6H5, 4’‐isomer); 7.64 (d, J 1.5, 1H, H6’, 5’‐ isomer); 138.6 (C1’, 4’‐isomer); 140.6 (C2’’ 5’‐isomer); 140.8
isomer); 7.99 (dd, J 7.9; 1.8, 1H, H5’, 4’‐isomer); 8.03 (dd, J 8.3; (C2’’, 4’‐isomer); 145.2 (C3’’); 150.7 (C6’’); 157.2 (C3+C6);
1.8, 1H, H4’, 5’‐isomer); 8.10 (br d, J 8.0, 1H, H3’, 5’‐isomer); 159.3 (C9); 159.6 (Cq); 159.7 (Cq); 161.3 (C4a + C5a); 167.3 (2’‐
8.43 (d, J 1.7, 1H, H3’, 4’‐isomer); 13C NMR (100.62 MHz, CO2H); 168.6 (Cq); 168.8 (CONH). UV‐Vis (λmax / nm) 559; ε =
MeOD‐d4, ppm): δ 12.8 (CH2CH3‐rhodamine 5’‐isomer, 4’‐ 5.4 x 104 mol‐1 dm3 cm‐1; Fluorescence (λmax / nm) 583.
isomer); 20.8 (2’’‐CH3, 5’‐isomer); 20.9 (6’’‐CH3, 4’‐isomer);
37.1 (CH2NH, 5’‐isomer); 37.2 (CH2NH, 4’‐isomer); 37.4 (NCH3,
4 | J. Name., 2012, 00, 1‐3
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