Hydrogen Bonding of Syn-Rotamer of Amino Acid Carbamates
J . Org. Chem., Vol. 61, No. 24, 1996 8405
to indicate a finite negative ∆Sq, which may imply that
the H-bond is already partially formed in the transition
state.
Exp er im en ta l Section
The NMR spectra were all recorded on a Bruker AM-300,
at 300.1 (1H) and 75.5 (13C) MHz. All spectra were taken in
CDCl3 solutions, at 24 ( 2 °C, using TMS as the internal
reference, unless otherwise indicated. The probe temperatures
were measured with a calibrated Eurotherm 840/T digital
thermometer and are believed to be accurate to 0.5 K. For
the complete line shape analysis (Figure 8 and Table 8) a
modified version of a program written by R. E. D. McClung,
University of Alberta, Edmonton, Canada T6J 262, was used.
Mass spectra were obtained on a Varian Mat 731 spectrometer
(CI ) chemical ionization). Most protected amino acids were
purchased from Sigma and were used without further purifi-
cation.
N-(ter t-Bu tyloxyca r bon yl)-L-vin ylglycin e (1a ). Di-tert-
butyl dicarbonate (0.24 g, 1.1 mmol) was added to a solution
of L-vinylglycine (1 mmol) and NaOH (0.08 g, 2 mmol) in
distilled H2O (2 mL) and tert-BuOH (4 mL). The mixture was
stirred at room temperature overnight and was then diluted
with H2O, extracted with hexane (3×), acidified to pH ) 2 (1
N KHSO4), and extracted with EtOAc (3×). The combined
EtOAc layers were dried over MgSO4, filtered, and evaporated
to give the desired N-protected product as a light yellow oil
(65% yield) (note: the product existed in the form of two
distinguishable rotamers): 1H-NMR (CDCl3) δ 1.45 (s, 9H),
4.69 and 4.91 (two m, 1H), 5.10 and 7.10 (two brd, J ) 7 Hz,
1H), 5.30 (d, J ) 10.5 Hz, 1H), 5.39 (d, J ) 17.2, 1H, CH2),
5.90 (m, 1H); 13C-NMR (CDCl3) δ 28.25, 55.68, 57.10,), 80.55,
81., 117.80, 132.31, 156.00, 173.77, 174.42; MS (CI/i-Bu) m/ e
200 (M - 1+, 3), 146 (MH+ - C4H8, 23), 102 (MH+ - C5H8O2,
100).
F igu r e 8. Calculated (left) and experimental (right) 1H-NMR
spectra of the R-H of 4a as a function of temperature.
Gen er a l P r oced u r e for th e P r ep a r a tion of Meth yl
Ester s Usin g Tr im eth ylsilyl Dia zom eth a n e.5 A 2 M
solution of TMS diazomethane in hexane (0.65 mL, 1.3 mmol)
was added dropwise to a solution of N-protected amino acid
(1 mmol) in hexane (5 mL) and dry MeOH (2 mL). The
mixture was stirred at room temperature overnight and
became cloudy. The solvent was evaporated to dryness, and
the residue dissolved in CHCl3 was washed with 5% NaHCO3.
The aqueous layer was extracted with CHCl3 (2×), and the
combined organic layers were dried over MgSO4, filtered, and
evaporated to give the desired ester. Note: Although it is not
required to wash the product with 5% NaHCO3,5 we found this
necessary, in order to obtain a clean product, without a trace
of the starting acid.
Ta ble 8. Equ ilibr iu m Con sta n ts a n d Exch a n ge Ra te for
th e Rota m er s of N-Boc-Ala n in e (4a )a
K,
anti/syn
∆G°
cal/mol
k, s-1
anti f syn
∆Gq,
kcal/mol
T, K
218.9
240.4
261.3
282.5
295.3
308.4
320.9
335.4
0.09
0.15
0.59
1.20
1.75
2.20
3.17
4.37
1061
907
277
-103
-330
-486
-740
-989
-
-
-
-
-
-
5.5
15.5 ( 0.1
15.6 ( 0.1
15.6 ( 0.2
15.8 ( 0.2
15.9 ( 0.2
16.0
52.0
105.0
300.0
a
∆H° ) 4.8 ( 0.3 kcal/mol; ∆S° ) 17 ( 1 cal/mol K.
Meth yl (2S)-2-[(ter t-Bu tyloxyca r bon yl)a m in o]bu tyr a te
(2b). Obtained as a colorless oil (57% yield): 1H NMR (CDCl3)
δ 0.91 (t, J ) 7.5 Hz, 3H), 1.43 (s, 9H,), 1.55-1.90 (m, 2H),
3.73 (s, 3H), 4.25 (q, J ) 6.8 Hz, 1H), 5.05 (d, J ) 6.2 Hz, 1H);
13C NMR (CDCl3) δ 9.55, 25.85, 28.25, 52.07, 54.50, 79.73,
the same sign, the latter being quite large, consistent
with an aggregation phenomenon. In the esters, ∆S° is
very small. Thus the value of ∆G° in N-Boc-alanine
methyl ester 4b (Table 3), 1.1 kcal/mol for the anti/syn
pair, is to a good approximation, the value of ∆H° as well,
reflecting the natural steric preference for the anti-
rotamer. If the syn- and anti-rotamers of the correspond-
ing acid have a similar enthalpy difference, then the
stabilization induced to the syn-rotamer of the acid by
the H-bond is approximately 6 kcal/mol (4.8+1.1), in
excellent agreement with other estimates of H-bonding
energies.8 The energy barrier for the rotation process is
ca. 16 kcal/mol (Table 8). Surprisingly, few quantitative
measurements of rotation barriers in carbamates have
been reported.1,7 Usually, ∆Sq for rotation of amides and
similar compounds is close to zero. Here, the data seem
155.30, 173.18; MS (CI/i-Bu) m/e 218 (MH+, 15), 203 (MH+
-
Me, 3), 186 (MH+ - MeOH, 15), 162 (MH+ - C4H8, 100), 118
(MH+ - C5H8O2, 30).
N-(ter t-Bu t yloxyca r b on yl)-L-(p -m et h oxy)p h en ylgly-
cin e Meth yl Ester (3b). Obtained as white crystals (61%
yield): 1H NMR (CDCl3) δ 1.48 (s, 9H), 3.77 (s, 3H), 3.85 (s,
3H), 5.31 (d, J ) 7.5 Hz, 1H), 5.56 (d, J ) 5.8 Hz, 1H), 6.93
(m, 2H), 7.33 (m, 2H); 13C NMR (CDCl3) δ 28.24, 52.50, 55.20,
56.98, 79.99, 114.20, 128.28, 128.91, 154.73, 159.58, 171.77;
MS (CI/i-Bu) m/e 295 (M+, 3), 239 (M+ - C4H8, 8), 179 (M+
C5H8O2, 76).
-
N-(ter t-Bu tyloxyca r bon yl)-L-a la n in e Meth yl Ester (4b).
Obtained as white crystals (50% yield): 1H NMR (CDCl3) δ
1.38 (d, J ) 7.2 Hz, 3H), 1.45 (s, 9H), 3.75 (s, 3H), 4.32 (quintet,
J ) 7.2 Hz, 1H), 5.09 (brs, 1H); 13C NMR (CDCl3) δ 18.43,
28.19, 49.08, 52.10, 79.66, 154.98, 173.66; MS (EI) m/e 203 (M+,
8), 147 (M+ - C4H8, 64), 143 (M+ - C2H4O2, 8), 103 (M+
C5H8O2, 34).
-
(7) Oki, M. Applications of Dynamic NMR Spectroscopy to Organic
Chemistry; VCH: Deerfield Beach, FL, 1985; pp 54-60.
(8) Maskill H. The Physical Basis of Organic Chemistry; Oxford
University Press: Oxford, 1985; p 148.
N-(ter t-Bu tyloxyca r bon yl)-L-glycin e Meth yl Ester (5b).
Obtained as white crystals (47% yield): 1H NMR (CDCl3) δ