Biomacromolecules
Article
dried over MgSO4. After filtration, addition of diethyl ether to the
organic layer induced the precipitation of the product (white solid, 864
mg). The filtrate was evaporated and redissolved in DCM. Similar
treatment gave an additional 365 mg, for an overall yield of 1.23 g
(65%), Alternatively, the product was recovered from the DCM phase
without ether precipitation (85% yield, with residual DIEA). 1H NMR
(600 MHz, DMSO-d6) δ (ppm) 7.97 (s, 1H), 7.89 (d, J = 7.5 Hz, 2H),
7.72 (d, J = 7.5 Hz, 2H), 7.67 (d, J = 8.0 Hz, 1H), 7.59 (t, J = 5.6 Hz,
1H), 7.41 (t, J = 7.4 Hz, 2H), 7.33 (t, J = 7.4 Hz, 2H), 7.28 (s, 1H),
6.29 (s, 1H), 5.43 (s, 2H), 5.28 (s, 2H), 4.27 (m, 2H), 4.22 (m, 1H),
3.94 (m, 1H), 3.42 (s, 3H), 3.04 (q, J = 6.5 Hz, 2H), 1.74 (m, 1H),
1.60 (m, 1H), 1.51 (m, 2H). MS (ESI) m/z: [M − H]− calcd for
C33H30BrN2O10, 693.1; found, 693.0.
Synthesis of 4. To a stirred solution of 3 (680 mg, 0.98 mmol),
DMAP (24 mg, 0.20 mmol) and 2-hydroxyethylacrylamide (0.4 mL,
0.45 g, 3.9 mmol) in DCM (9 mL) was added dropwise a solution of
DCC (202 mg, 0.98 mmol) in DCM (4 mL) at 0 °C. The reaction
mixture was stirred overnight at RT. The crude mixture was washed
three times with water and once with brine. The organic layer was
removed under reduced pressure and the gray solid residue (960 mg)
was used in the next step without further purification. MS (ESI) m/z:
[M + H]+ calcd for C38H39BrN3O11, 792.2; found, 792.1.
Synthesis of 7. Over a solution of tetraethylene glycol monomethyl
ether (3.74 g, 17.9 mmol) in acetone (530 mL) was added dropwise
15 mL of Jones reagent ([CrO3] = 2.4 M) at 0 °C. The reaction was
stirred at room temperature for 2 h followed by the addition of
isopropyl alcohol (8 mL). Afterward, saturated sodium chloride (320
mL) was added to the mixture and stirred for 1 h before the removal of
acetone under reduced pressure. Then, the aqueous mixture was
extracted with DCM (4 × 200 mL). Organic layers were combined,
then dried over MgSO4 and finally removed under reduced pressure.
1
Yield: 3.69 g (93%). H NMR (600 MHz, CDCl3) δ 4.14 (s, 2H),
3.75−3.74 (m, 2H), 3.69−3.68 (m, 4H), 3.65−3.62 (m, 4H), 3.58−
3.56 (m, 2H), 3.39 (s, 3H).
Synthesis of 8. 3-Amino-1,2-propane diol (3.09 g, 34 mmol) in
DMF (100 mL) was added dropwise at 0 °C to a stirred solution of
tert-butyl(chloro)diphenylsilane (9.8 mL, 37.4 mmol) and imidazole
(2.78 g, 40.8 mmol) in DMF (200 mL). The reaction mixture was
stirred overnight at RT. DMF was removed under reduced pressure
and the residue was dissolved in DCM. The organic layer was washed
with brine, dried over MgSO4 and finally removed under reduced
pressure. The product was purified by flash chromatography on silica
1
gel (DCM/methanol, 100:0 to 90:10). Yield: 4.14 g (37%). H NMR
(600 MHz, CDCl3) δ 7.63 (d, J = 7.5 Hz, 4H), 7.39 (t, J = 7.5 Hz,
2H), 7.36 (t, J = 7.5 Hz, 4H), 3.86−3.82 (m, 1H), 3.63−3.61 (m, 2H),
2.95−2.85 (m, 2H), 1.04 (s, 9H). MS (ESI) m/z: [M + H]+ calcd for
C19H28NO2Si, 330.2; found, 330.1.
Synthesis of 5. Crude 4 (960 mg) was dissolved in DMF (10 mL)
with piperidine (94.1 mg, 1.1 mmol), stirred for 1 h 30 min and
monitored by LCMS. Upon completion, the reaction mixture was
filtered (1 μm filter) and the solvent was removed under reduced
pressure. DCM was added, and the precipitate formed (remaining
DCU salts) was filtered out (0.45 μm filter). The product was purified
by flash chromatography on silica gel (DCM/methanol). Yield: 331
Synthesis of 9. After dissolution of 8 (3.52 g, 10.6 mmol) in EtOAc
(75 mL), a solution of K2CO3 (14.79 g, 107 mmol) in water (75 mL)
was added, and the resulting mixture was stirred vigorously at 0 °C.
Acryloyl chloride (1.73 mL, 21.2 mmol) was then added dropwise to
the reaction at 0 °C. After a few minutes, the reaction mixture was
allowed to reach RT and was stirred until completion of the reaction,
monitored by LCMS. After 2 h, the organic and aqueous layers were
separated. The aqueous phase was extracted twice with EtOAc.
Organic layers were combined, washed once with water, then dried
over MgSO4, and finally removed under reduced pressure. Yield: 3.78
g (92%). 1H NMR (600 MHz, CDCl3) δ 7.64 (d, J = 7.0 Hz, 4H), 7.45
(t, J = 7.5, 7.0 Hz, 2H), 7.40 (t, J = 7.5, 7.0 Hz, 4H), 6.25 (d, J = 17.5
Hz, 1H), 6.01 (dd, J = 17.5, 9.6 Hz, 1H), 5.79 (bs, 1H), 5.64 (d, J = 9.6
Hz, 1H), 3.86 (bs, OH), 3.70−3.67 (m, 1H), 3.65−3.60 (m, 2H),
3.30−3.26 (m, 1H), 3.10−3.09 (m, 1H), 1.08 (s, 9H). ES-MS: M + Na
= 406.2 g·mol−1 (calcd = 406.2 g·mol−1). MS (ESI) m/z: [M + Na]+
calcd for C22H29NNaO3Si, 406.2; found, 406.2.
1
mg (60%, over two steps). H NMR (600 MHz, DMSO) δ (ppm)
8.22 (t, J = 5.2 Hz, 1H), 7.97 (s, 1H), 7.55 (t, J = 5.7 Hz, 1H), 7.28 (s,
1H), 6.28 (s, 1H), 6.20 (dd, J = 17.1, 10.1 Hz, 1H), 6.08 (dd, J = 17.1,
1.8 Hz, 1H), 5.58 (dd, J = 10.1, 1.8 Hz, 1H), 5.43 (s, 2H), 5.28 (s,
2H), 4.08 (m, 2H), 3.42 (s, 3H), 3.38 (m, 2H), 3.30 (m, 1H), 3.02 (q,
J = 6.1 Hz, 2H), 1.59 (m, 1H), 1.52−1.39 (m, 3H). MS (ESI) m/z: [M
+ H]+ calcd for C23H29BrN3O9, 570.1; found, 570.2.
Synthesis of 6. After dissolution of 5 (57 mg, 0.1 mmol) in EtOAc
(1.5 mL), a solution of K2CO3 (138.1 mg, 1 mmol) in water (1.5 mL)
was added, and the resulting mixture was stirred vigorously at 0 °C.
Acryloyl chloride (16.2 μL, 0.2 mmol) was then added dropwise to the
reaction at 0 °C. After a few minutes, the reaction mixture was allowed
to reach RT and was stirred until completion of the reaction,
monitored by LC-MS. After 30 min, the organic solvent was removed
under reduced pressure and DCM was added to the crude. The
organic layer was washed extensively with water and evaporated under
Synthesis of 10. A mixture of 7 (3.64 g, 9.5 mmol), 9 (1.06 g, 4.7
mmol), and DMAP (0.116 g, 0.95 mmol) was dissolved in DCM (160
mL). A solution of DCC (1.1 g, 5.3 mmol) in DCM (20 mL) was
added dropwise at 0 °C, and the reaction mixture was stirred overnight
at RT. DCU salts were filtered off, and the solvent was removed under
reduced pressure. The product was purified by flash chromatography
1
reduced pressure to give a white solid (63 mg, 100%). H NMR (600
MHz, DMSO-d6) δ (ppm) 8.48 (d, J = 7.5 Hz, 1H), 8.18 (t, J = 5.7
Hz, 1H), 7.97 (s, 1H), 7.56 (t, J = 5.7 Hz, 1H), 7.28 (s, 1H), 6.31 (dd,
J = 17.1, 10.1 Hz, 1H), 6.28 (s, 1H), 6.20 (dd, J = 17.1, 10.1 Hz, 1H),
6.10 (td, J = 16.7, 2.2, 1.8 Hz, 2H), 5.64 (dd, J = 10.1, 1.8 Hz, 1H),
5.59 (dd, J = 10.1, 2.2 Hz, 1H), 5.43 (s, 2H), 5.28 (s, 2H), 4.33 (m,
1H), 4.15−4.06 (m, 2H), 3.42 (s, 3H), 3.38 (q, J = 11.6, 5.7 Hz, 2H),
3.03 (q, J = 12.8, 6.6 Hz, 2H), 1.80−1.72 (m, 1H), 1.68−1.58 (m,
1H), 1.51−1.44 (m, 2H).
Synthesis of 1. Compound 6 (63.4 mg, 0.1 mmol) was stirred in
DCM (2 mL) and TFA (0.2 mL) for 1 h. TFA was removed under
high vacuum. TFA was removed by redissolution of the residue in
DCM and evaporation, repeated three times, yielding 59 mg of whitish
solid foam (100%). 1H NMR (600 MHz, DMSO-d6) δ (ppm) 8.48 (d,
J = 7.4 Hz, 1H), 8.18 (t, J = 5.4 Hz, 1H), 7.87 (s, 1H), 7.55 (t, J = 5.4
Hz, 1H), 6.91 (s, 1H), 6.31 (dd, J = 17.1, 10.1 Hz, 1H), 6.20 (dd, J =
17.1, 10.1 Hz, 1H), 6.18 (bs, 1H), 6.10 (td, J = 17.1, 1.8 Hz, 2H), 5.64
(dd, J = 10.1, 1.8 Hz, 1H), 5.59 (dd, J = 10.1, 1.8 Hz, 1H), 5.25 (s,
2H), 4.33 (m, 1H), 4.15−4.06 (m, 2H), 3.37 (m, 2H), 3.03 (q, J =
12.7, 6.6 Hz, 2H), 1.78−1.72 (m, 1H), 1.66−1.60 (m, 1H), 1.50−1.43
(m, 2H). 13C NMR (150 MHz, DMSO) δ (ppm) 25.76, 28.24, 37.55,
51.82, 60.77, 62.92, 103.15, 106.14, 108.48, 110.48, 125.27, 125.90,
128.33, 130.98, 131.42, 151.06, 153.73, 155.24, 157.38, 159.63, 164.68,
164.83, 171.79. HRMS (ESI) m/z: [M + Na]+ calcd for
C24H26BrN3NaO9, 602.0745; found, 602.0744.
1
on silica gel (Hex/EtOAc, 100:0 to 0:100). Yield: 2.11 g (76%). H
NMR (600 MHz, CDCl3) δ 7.64 (d, J = 7.0 Hz, 4H), 7.43 (d, J = 7.5
Hz, 2H), 7.39 (d, J = 7.5, 7.0 Hz, 4H), 6.29 (bs, 1H), 6.25 (d, J = 17.1
Hz, 1H), 6.03 (dd, J = 17.1, 10.1 Hz, 1H), 5.61 (d, J = 10.1 Hz, 1H),
5.14−5.11 (m, 1H), 4.16−4.04 (m, 2H), 3.82−3.78 (m, 2H), 3.68−
3.61 (m, 10H), 3.55−3.51 (m, 2H), 3.35 (s, 3H), 1.05 (s, 9H). MS
(ESI) m/z: [M + H]+ calcd for C31H46NO8Si, 588.3; found, 588.2.
Synthesis of 11. To a solution of 10 (716 mg, 1.2 mmol) in THF
(9 mL) was added a solution of TBAF hydrate (637 mg, 2.4 mmol) in
THF (10 mL) at 0 °C. After a few minutes, the reaction mixture was
allowed to reach RT and was stirred until completion of the reaction,
monitored by LCMS. THF was removed under reduced pressure, and
the product was purified by flash chromatography on silica gel (DCM/
methanol, 100:0 to 95:5). Yield: 303 mg (71%). 1H NMR (600 MHz,
CDCl3) δ 6.50 (bs, NH), 6.32 (d, J = 16.7 Hz, 1H), 6.15 (dd, J = 16.7,
11.0 Hz, 1H), 5.68 (d, J = 11.0 Hz, 1H), 4.24−4.15 (m, 4H), 4.04−
4.00 (m, 1H), 3.73−3.63 (m, 12H), 3.56−3.55 (m, 2H), 3.37 (s, 3H).
MS (ESI) m/z: [M + H]+ calcd for C15H28NO8, 588.3; found, 588.2.
Synthesis of 12. To a stirred solution of 3 (410.6 mg, 0.47 mmol),
DMAP (115.4 mg, 0.20 mmol), and 11 (165.0 mg, 0.47 mmol) in
DCM (6 mL) was added dropwise DCC (194.9 mg, 0.94 mmol)
dissolved in DCM (4 mL) at 0 °C. The reaction mixture was stirred
C
Biomacromolecules XXXX, XXX, XXX−XXX