Journal of Natural Products
Article
Isolation Procedure. The freeze-dried cells (IL-374, 1600 g) were
extracted with 7:3 MeOH/H2O (3 × 3 L). The extract was evaporated
to dryness (98.5 g) and separated on an ODS (YMC-GEL, 120A, 4.4
× 6.4 cm, 10 portions of 10 g each) flash column, eluting with
increasing amounts of MeOH in H2O. Fraction 6 (1:1 MeOH/H2O,
2.645 g) was subjected to a Sephadex LH-20 column eluting with 7:3
MeOH/H2O to obtain 14 fractions. Fractions 5−7 from the Sephadex
LH-20 column were again subjected to a Sephadex LH-20 column
eluting with 1:1 MeOH/H2O to obtain 14 fractions. Fraction 7 from
the second Sephadex LH-20 column (30.5 mg) was separated on a
reversed-phase HPLC column (Hibar, 5 μm, 250 mm × 25.0 mm,
DAD at 238 nm, flow rate 5.0 mL/min) eluting with 77:23 0.1%
aqueous TFA/CH3CN to obtain pure compounds 5 (1.1 mg,
retention time 32.0 min, 0.0001% yield based on the dry weight of
the bacteria) and 6 (0.9 mg, retention time 40.8 min, 0.0001% yield).
Fraction 9 from the second Sephadex LH-20 column (28.4 mg) was
separated on a reversed-phase HPLC column (Hibar, 5 μm, 250 mm ×
25.0 mm, DAD at 238 nm, flow rate 5.0 mL/min) eluting with 72:28
0.1% aqueous TFA/CH3CN to obtain pure compounds 1 (1.7 mg,
retention time 20.8 min, 0.0001% yield) and 2 (2.0 mg, retention time
22.6 min, 0.0001% yield). Combined fractions 7 and 8 from the initial
reversed-phase column (6:4 and 7:3 MeOH/H2O, 2.929 g) was loaded
on a Sephadex LH-20 column eluting with 1:1 CHCl3/MeOH to
obtain 14 fractions. Combined fractions 3 and 4 from this Sephadex
LH-20 column were subjected to an additional Sephadex LH-20
column eluting with 7:3 MeOH/H2O to obtain 14 fractions. Fractions
8−11 from the second Sephadex LH-20 column (95.4 mg) were
separated on a reversed-phase HPLC column (YMC-Pack ODS-A, 5
μm, 250 mm × 20.0 mm, DAD at 238 nm, flow rate 5.0 mL/min) in
1:1 0.1% aqueous TFA/MeOH to obtain pure compound 3 (4.0 mg,
retention time 17.2 min, 0.0003% yield), compound 4 (3.0 mg,
retention time 14.9 min, 0.0002% yield), compound 7 (2.4 mg,
retention time 16.5 min, 0.0002% yield), and microcin SF608 (4.5 mg,
retention time 21.3 min, 0.0003% yield). Fractions 4−7 from the
second Sephadex LH-20 column (379 mg) were separated on a
reversed-phase HPLC column (YMC-Pack C-8, 5 μm, 250 mm × 20.0
mm, DAD at 238 nm, flow rate 5.0 mL/min) in 1:1 0.1% aqueous
TFA/MeOH to obtain pure anabaenopeptin DA850 (9) (2.1 mg,
retention time 23.9 min, 0.0001% yield). Fraction 9 from the initial
reversed-phase column (4:1 MeOH/H2O, 1.842 g) was subjected to a
Sephadex LH-20 column eluting with 1:1 CHCl3/MeOH to obtain 13
fractions. Fractions 4−8 from the Sephadex LH-20 column were
subjected to an additional Sephadex LH-20 column eluting with 7:3
MeOH/H2O to obtain 15 fractions. Fractions 3−5 from the second
Sephadex LH-20 column (184.8 mg) were separated on a reversed-
phase HPLC column (YMC-Pack ODS-A, 5 μm, 250 mm × 20.0 mm,
DAD at 238 nm, flow rate 5.0 mL/min) in 1:1 H2O/CH3CN to obtain
five fractions, some of which contain aeruginazoles DA1497, DA1304,
and DA1274.21 Fraction 2 from the reversed-phase HPLC was
separated again by a reversed-phase HPLC column (YMC-Pack C-8, 5
μm, 250 mm × 20.0 mm, DAD at 238 nm, flow rate 5.0 mL/min) in
55:45 0.1% aqueous TFA/MeOH to obtain pure compound 8 (2.6
mg, retention time 29.0 min, 0.0002% yield). Fraction 5 from the
initial reversed-phase column was subjected to a Sephadex LH-20
column eluting with 1:1 CHCl3/MeOH to obtain 10 fractions.
Fractions 4−7 from the second Sephadex LH-20 column (211.5 mg)
were separated on a reversed-phase HPLC column (YMC-Pack C-8, 5
μm, 250 mm × 20.0 mm, DAD at 238 nm, flow rate 5.0 mL/min) in
55:45 0.1% aqueous TFA/MeOH to obtain micropeptin MZ1019 (2.2
mg, retention time 20.7 min, 0.0001% yield), cyanopeptolin SS (1.4
mg, retention time 30.0 min, 0.000 06% yield), micropeptin MZ924
(0.7 mg, retention time 39.7 min, 0.000 03% yield), micropeptin
MZ939A (1.8 mg, retention time 42.1 min, 0.000 11% yield), and
cyanopeptolin S (1.3 mg, retention time 51.2 min, 0.000 05% yield).
3.95, D-Hpla 4.24 min). Retention times of AA Marfey’s derivatives: D-
phenylalanine 46.9 min (L-Phe 44.9, D-Phe 46.9 min), L-6-epi-Choi
34.9 min (L-Choi 36.5, L-6-epi-Choi 34.9 min, D-3a,7a-diepi-Choi 31.0
min).
Aeruginosin DA511 (2): colorless oil; [α]25 −134 (c 0.19,
D
MeOH); UV (MeOH) λmax (log ε) 207 (4.06), 225 (3.95), 277 (3.41)
nm; IR (KBr) νmax 3460, 1684, 1205, 1141 cm−1; NMR data, see
Tables 1, S2a, and S2b; HRESIMS m/z 534.2212 [M + Na]+ (calcd for
C27H33N3NaO7, 534.2216). Retention time of hydroxy acid on chiral-
phase column: D-Hpla 4.28 min (L-Hpla 3.99, D-Hpla 4.28 min).
Retention times of AA Marfey’s derivatives: D-tyrosine 52.1 min (L-Tyr
50.4, D-Tyr 52.1 min), L-6-epi-Choi 35.1 min (L-Choi 36.6, L-6-epi-
Choi 35.1 min, D-3a,7a-diepi-Choi 31.0 min).
Aeruginosin DA642A (3): colorless oil; [α]25 −63 (c 0.31,
D
MeOH); UV (MeOH) λmax (log ε) 203 (4.42), 229 (3.72), 281 (3.18)
nm; IR (KBr) νmax 3450, 2935, 1678, 1204, 1138 cm−1; NMR data, see
Tables 2, S3a, and S3b; HRESIMS m/z 643.3016/645.3014 (3:1), [M
+ H]+ (calcd for C32H4535ClN6O6, 643.3011). Retention time of
hydroxy acid on chiral-phase column: L-Cl-Hpla 3.93 min (L-Cl-Hpla
3.93, D-Cl-Hpla 4.29 min). Retention times of AA Marfey’s derivatives:
L-phenylalanine 44.6 min (L-Phe 44.6, D-Phe 46.5 min), L-Choi 36.5
min (L-Choi 36.5, L-6-epi-Choi 34.9 min).
Aeruginosin DA642B (4): colorless oil; [α]25 −36 (c 0.28,
D
MeOH); UV (MeOH) λmax (log ε) 202 (4.32), 228 (3.63), 281 (3.01)
nm; IR (KBr) νmax 3450, 2934, 1678, 1205, 1138 cm−1; NMR data, see
Tables 2, S4a, and S4b; HRESIMS m/z 643.3014/645.3006 (3:1), [M
+ H]+ (calcd for C32H4535ClN6O6, 643.3011). Retention time of
hydroxy acid on chiral-phase column: D-Cl-Hpla 4.27 min (L-Cl-Hpla
3.93, D-Cl-Hpla 4.27 min). Retention times of AA Marfey’s derivatives:
L-phenylalanine 44.6 min (L-Phe 44.6, D-Phe 46.5 min), L-Choi 36.5
min (L-Choi 36.5, L-6-epi-Choi 35.2 min).
Aeruginosin DA688 (5): pale yellow, glassy material; [α]25D −160
(c 0.1, MeOH); UV (MeOH) λmax (log ε) 206 (4.19), 229 (3.78), 279
(3.34) nm; IR (KBr) νmax 2924, 1682, 1205, 1140 cm−1; NMR data,
see Tables 3, S5a, and S5b; HRESIMS m/z 711.2540/713.2585 (3:1),
[M + Na]+ (calcd for C29H4535ClN6NaO9S, 711.2555). Retention time
of hydroxy acid on chiral-phase column: D-Cl-Hpla 4.28 min (L-Cl-
Hpla 3.81, D-Cl-Hpla 4.28 min). Retention times of AA Marfey’s
derivatives: D-leucine 47.1 min (L-Leu 44.4, D-Leu 47.1 min), L-Choi
36.6 min (L-Choi 36.6, L-6-epi-Choi 35.3 min).
Aeruginosin DA722 (6): pale yellow, glassy material; [α]25D −135
(c 0.13, MeOH); UV (MeOH) λmax (log ε) 202 (4.23), 226 (3.68),
285 (3.04) nm; IR (KBr) νmax 2928, 1666, 1205 cm−1; NMR data, see
Tables 3 and S6a; HRESIMS m/z 721.2203/723.2231/725.2165
(9:6:1), [M − H]− (calcd for C29H4335Cl2N6O9S, 721.2189).
Retention time of hydroxy acid on chiral-phase column: D-di-Cl-
Hpla 4.31 min (L-di-Cl-Hpla 3.81, D-di-Cl-Hpla 4.31 min). Retention
times of AA Marfey’s derivatives: D-leucine 46.6 min (L-Leu 43.9, D-
Leu 46.6 min), L-Choi 36.4 min (L-Choi 36.4, L-6-epi-Choi 35.0 min).
Aeruginosin DA495B (7): colorless, glassy material; [α]25D −44 (c
0.13, MeOH); UV (MeOH) λmax (log ε) 202 (3.88), 227 (3.20), 280
(2.69) nm; IR (KBr) νmax 1685, 1206, 1140 cm−1; NMR data, see
Tables 3, S7a, and S7b; HRESIMS m/z 518.2031/520.2043 (3:1), [M
+ Na]+ (calcd for C24H3435ClN3NaO6, 518.2034). Retention time of
hydroxy acid on chiral-phase column: D-Cl-Hpla 4.20 min (L-Cl-Hpla
3.88, D-Cl-Hpla 4.20 min). Retention times of AA Marfey’s derivatives:
D-leucine 47.1 min (L-Leu 44.4, D-Leu 47.1 min), L-Choi 36.8 min (L-
Choi 36.8, L-6-epi-Choi 35.6 min).
Microguanidine DA368 (8): transparent, glassy material; [α]25
D
−78 (c 0.19, MeOH); UV (MeOH) λmax (log ε) 202 (3.81), 223
(3.74), 278 (3.05); IR (KBr) νmax 3445, 1647, 1206, 1139 cm−1; NMR
data, see Table S8; HRESIMS m/z 369.2860 ([M + H]+ (calcd for
C19H37N4O3 m/z 369.2871).
Anabaenopeptin DA850 (9): white, glassy material; [α]25D −145
(c 0.15, MeOH); UV (MeOH) λmax (log ε) 202 (4.21), 273 (2.63); IR
(KBr) νmax 3448, 1664, 1206, 1139 cm−1; NMR data, see Table S9;
HRESIMS m/z 851.4774 [M + H]+ (calcd for C42H63N10O9,
851.4779). Retention times of AA Marfey’s derivatives: L-Phe 45.4
min (L-Phe 45.4, D-Phe 57.5 min), L-NMe-alanine 35.5 min (L-NMeAla
35.5, D-NMeAla 36.2 min), L-homotyrosine 40.8 min, L-isoleucine 44.2
Aeruginosin DA495A (1): colorless oil; [α]25 −48 (c 0.15,
D
MeOH); UV (MeOH) λmax (log ε) 201 (4.14), 225 (3.69), 277 (2.94)
nm; IR (KBr) νmax 3450, 1680, 1206, 1138 cm−1; NMR data, see
Tables 1, S1a and S1b in Supporting Information; HRESIMS m/z
518.2266 [M + Na]+ (calcd for C27H33N3NaO6, 518.2267). Retention
time of hydroxy acid on chiral-phase column: D-Hpla 4.24 min (L-Hpla
2314
dx.doi.org/10.1021/np4006844 | J. Nat. Prod. 2013, 76, 2307−2315