ACS Medicinal Chemistry Letters
Letter
CYP7A1 expression in the liver.20 One of our early leads was
the spirocyclic acetal (compound 2) which, despite its modest
potency in the FXR Gal-4 luciferase reporter assay (227 96
nM, as with all compounds described was a full agonist) and
poor chemical stability (prone to hydrolysis at low pH, data
not shown), opened the possibility of spirocycles being
tolerated as a replacement for the methylene ether, a discovery
that had no literature precedent to our knowledge. The related
ketal linker (compound 3) was also synthesized but was found
to have reduced potency relative to 2 (1359 105 nM). In a
simultaneous effort, we found that the ether oxygen in this
series could be replaced with carbon, and the ethylene-linked
compound 4 was found to serve as a suitable surrogate for the
Although the initial in vitro and in vivo data around
compound 8 was compelling, additional in vitro ADME
profiling revealed liabilities that prevented the advancement of
this compound for further investigation. In particular,
compound 8 exhibited inhibition of CYP3A4 (IC50 = 0.9 μM)
and CYP2C8 (IC50 = 6.9 μM). Given the frequent
comorbidities of the NASH patient population, there is a
high likelihood that patients may be taking other prescription
drugs, and we sought to avoid potential drug−drug
interactions (DDIs) that could occur through inhibition of
the metabolizing CYP enzymes. In addition to concerns over
CYP inhibition of 8, metabolite identification studies revealed
that a high percentage of bioactivation was possible in vivo as
measured through glutathione (GSH) adduct formation on the
2,6-dichlorophenyl ring.
methylene ether linkage (21.4
3.4 nM) albeit with lower
than desired metabolic stability in human liver microsomes
(HLM) (t1/2 = 19 min). In an attempt to rigidify and stabilize
the alkyl-based linker, we introduced unsaturation into the
system in the form of the E alkene (compound 5) which gave a
2-fold improvement in potency in the FXR Gal4 assay (10.5
5.1 nM) and demonstrated similar potency in its ability to
induce recruitment of the SRC-1 coactivator (23.3 2.4 nM).
Despite falling within our desired range of FXR potency,
compound 5 lacked the requisite microsomal metabolic
stability for advancement to further profiling (t1/2 = 13 min
in HLM). In an attempt to block potential oxidative
metabolism of the piperidine linker, we explored bicyclic
analogs that would hopefully improve metabolic stability while
maintaining potency.21 Among the analogs we explored, the
azabicyclo[3.2.1]octane analog 6 gave a modest improvement
in mouse liver microsomal (MLM) stability but no improve-
ment in HLM stability relative to piperidine 5. Moreover, the
modification resulted in complete loss of FXR agonist potency
(>20,000 nM). The azabicyclo[3.1.0]hexane analog 7 did
improve HLM and MLM stability but came with an ∼10-fold
loss in potency relative to 5 in the Gal4 FXR reporter assay and
an ∼30-fold loss of potency in the FXR SRC-1 recruitment
assay. A major breakthrough in our effort was discovered by
combining our findings of the spirocyclic and alkene linkers to
give the azaspiro[3.5]nonene 8 which maintained the desired
balance between FXR agonist potency and metabolic stability
(7.1 3.3 nM; t1/2 = 51 min). Reduction of the linker alkene
to give azaspiro[3.5]nonane 9 had a negative impact on
potency (202 184 nM).
Given their promising potency in the FXR Gal4 and SRC-1
recruitment assays, compounds 5 and 8 were evaluated in a
mouse pharmacokinetic/pharmacodynamic (PK/PD) study
wherein we could readily assess these compounds’ ability to
impact biomarkers that are indicative of in vivo FXR target
engagement. FXR is involved in paracrine and endocrine
signaling by inducing the production and secretion of the
hormone fibroblast growth factor 15 (FGF15), the mouse
ortholog of FGF19 in humans, which can contribute to the
regulation of bile acid concentrations.3,4 Another function of
FXR in the liver is regulation of the conversion of cholesterol
to bile acids by the rate-limiting enzyme cholesterol 7-alpha-
hydroxylase (CYP7A1). Therefore, proximal readouts for
activation of FXR in vivo can be monitored through changes
in Fgf15 and Cyp7a1 gene expression.3,4,6 Six hours following a
single 3 mg/kg dose of compound in mice, there was a 10-fold
increase of FGF15 and a 96% reduction of CYP7A1 mRNA for
5 and an 18-fold increase in FGF15 and a 99% reduction of
CYP7A1 for 8 relative to vehicle control (Table 3).
Having determined that the azaspiro[3.5]nonene linker
provided a suitable balance between FXR agonist potency and
metabolic stability, we explored optimization of other regions
of the molecule to improve the CYP inhibition and suppress
GSH adduct formation that was observed for 8 (Table 2). In
order to reduce the GSH adduct formation, we modified the
2,6-dichlorophenyl ring to reduce the electron density to
inhibit reactive intermediate formation. The 2-trifluoromethyl-
phenyl (compound 10) and 2-trifluoromethoxyphenyl (com-
pound 11) gave modest but acceptable reductions in FXR
agonist potency (13.8
6.4 nM and 49.5
15.3 nM,
respectively), but these analogs still suffered GSH adduct
metabolite formation. Introduction of a nitrogen into the
phenyl ring to give the 3,5-dichloropyridine-containing
compound 12 resulted in a 4-fold reduction in potency but
only slightly improved CYP inhibition and reduced, but did
not completely prevent, the extent of GSH adduct formation.
Simultaneous to our efforts to find a replacement for the 2,6-
dichlorophenyl ring that was not susceptible to GSH adduct
formation, we explored changes to the right-hand benzothia-
zole carboxylic acid. FXR agonist potency was somewhat
sensitive to changes in this region of the molecule as the
nicotinic acid isomer 13 retained moderate potency (30.5
8.9 nM), but the picolinic acid isomer 14 was over 10-fold less
potent (342 103 nM). While the nicotinic acid analog 13
was within a reasonable potency range, this compound gave no
clear advantage with respect to CYP inhibition or GSH adduct
formation. Indole 15, which is contained in the clinical
compound LY2562175, was also less potent than the
benzothiazole, exhibited CYP inhibition, and was prone to
GSH conjugation. Despite a nearly 10-fold reduction in
potency relative to 8, quinoline analog 16 gave a modestly
improved CYP profile and, although still observable, had a
reduced propensity for bioactivation and GSH conjugation. To
try to capitalize on reduced adduct formation, a quinolone acid
was combined with the less reactive 2,6-dichlorophenyl
replacements. We prepared the 2,6-dichloro-4-fluoro analog
17, but this modification came with an unsuitable reduction in
FXR agonist potency (Gal4 EC50 = 522 41 nM). Likewise,
the 3,5-dichloropyridyl analog 18 lacked the desired potency
but did completely suppress GSH conjugate formation by
eliminating oxidative metabolism of the dichlorophenyl ring. In
an attempt to regain potency, a strategic investigation around
the impact of substituents on the quinoline revealed that
substitution at the 4-position provided enhanced FXR agonist
potency. The 4-CF3 analog 1 was nearly 4-fold more potent
than 18 and only 2-fold less potent than the corresponding
benzothiazole analog 12 in both the Gal4 and SRC-1
D
ACS Med. Chem. Lett. XXXX, XXX, XXX−XXX