Synthesis of 4′-Ethoxy Nucleoside Analogues
procedure to give 66 mg (0.23 mmol, 85%) as a 1:1 mixture of
diastereomers and as a yellow oil: 1H NMR δ 7.38-7.26 (m,
5H), 6.89 (s, 0.5H), 6.75 (s, 0.5H), 6.23-6.11 (m, 2H), 4.64 (s,
1H), 4.6 (s, 1H), 3.77 (d, J ) 12.5 Hz, 0.5H), 3.73 (d, J ) 12.3
Hz, 0.5H), 3.56 (d, J ) 15.9 Hz, 0.5H), 3.53 (d, J ) 16.2 Hz,
0.5H), 3.65-3.3 (m, 2H), 2.1 (s, 1.5H), 2.03 (s, 1.5H), 1.19 (t, J
) 7 Hz, 3H); 13C NMR δ 170.5, 170.1, 138.4, 138.2, 134.5, 133.7,
130.3, 130.2, 128.5, 128.4, 127.8, 127.6, 115.2, 114.2, 100.7,
99, 74.1, 73.8, 73.7, 73.6, 58.8, 58.4, 21.3, 21.2, 15.5, 15.4; IR
(neat) 2975, 2932, 2866, 2358, 2336, 1748 cm-1; FAB-LRMS
calcd for C14H17O3 (M - OAc): 233.13, found 233.13.
65.4, 60.0, 15.1; IR (neat) 3432, 1765 cm-1; FAB-HRMS calcd
for C7H10O4 (M + 1): 159.0657, found 159.0653.
(5S)-5-Eth oxy-5-(tr ieth ylsila n yloxym eth yl)-5H-fu r a n -
2-on e (13). Alcohol 12 (20.5 mg, 0.130 mmol) was dissolved
in 2 mL of DMF. DMAP (15.8 mg, 0.130 mmol), imidazole (21.2
mg, 0.311 mmol), and TESCl (0.030 mL, 0.16 mmol) were
added, and the mixture was stirred at room temperature for
12 h. The reaction was quenched with saturated aqueous NH4-
Cl, extracted with CH2Cl2, washed with brine, dried with
MgSO4, and concentrated. The crude oil was purified by flash
column chromatography (10:1 hexane/EtOAc) to yield TES
protected alcohol 13 (34.9 mg, 0.128 mmol, 99%) as a yellow
(4′S)-5′-O-Ben zyl-4′-eth oxy-2′,3′-d id eoxyd id eh yd r oth y-
m id in e (11). A two-necked flask was charged with thymine
(16.6 mg, 0.132 mmol) and 2.5 mL CH3CN. N,O-Bis(trimeth-
ylsilyl)acetamide (0.065 mL, 0.26 mmol) was added via syringe,
and the mixture was stirred for 30 min. The solution went
from a cloudy white suspension to a clear solution. Acetate 10
(35 mg, 0.12 mmol) was added dissolved in 1 mL of CH3CN
and the solution was cooled to 0 °C. SnCl4 (15 µL, 0.13 mmol)
was added via syringe down the sidearm of the flask to precool
the solution. The solution was stirred at 0 °C for ∼20 min until
no starting material was present by TLC (silica gel, 4:1 hexane/
EtOAc). The reaction was quenched cold with saturated
aqueous NaHCO3, extracted with CH2Cl2, dried with MgSO4,
and concentrated. The crude residue was purified by flash
column chromatography (100% EtOAc f 100% MeOH gradient
elution). The fractions were collected, concentrated, dissolved
in CH2Cl2, and filtered to removed any silica particles. Coupled
11 (27 mg, 0.075 mmol, 63%) was obtained as a separable
mixture of anomers: R-Anomer: 1H NMR δ 9.74 (s, 1H), 7.4-
7.25 (m, 5H), 6.93 (s, 1H), 6.38 (dd, J ) 1.1 Hz, 5.6 Hz, 1H),
6.02 (dd, J ) 0.8 Hz, 5.8 Hz, 1H), 4.61 (d, J ) 12 Hz, 1H), 4.56
(d, J ) 12 Hz, 1H), 3.83 (d, J ) 10.5 Hz, 1H), 3.7-3.35 (m,
2H), 3.48 (d, J ) 10.5 Hz, 1H), 1.9 (s, 3H), 1.18 (t, J ) 7.1 Hz,
3H); 13C NMR δ 164.2, 151.3, 137.7, 136.1, 133.9, 129, 128.6,
128, 127.8, 112.5, 111.4, 87.86, 73.69, 70.71, 58.86, 15.53,
12.57. â-Anomer: 1H NMR δ 9.69 (s, 1H), 7.53 (s, 1H), 7.4-
7.25 (m, 5H), 7.13 (s, 1H), 6.12 (s, 2H), 4.56 (s, 2H), 3.73 (s,
2H), 3.7-3.35 (m, 2H), 1.47 (s, 3H), 1.16 (t, J ) 7.1 Hz, 3H);
13C NMR δ 164.2, 151.1, 137.4, 136.4, 135.5, 131.3, 128.7,
128.2, 127.9, 114.2, 111.2, 88.67, 73.74, 72.9, 57.85, 15.33,
11.93. IR (neat) 1695 cm-1. Anal. Calcd for C19H22N2O5: C,
63.67; H, 6.18; N, 7.82. Found: C, 63.62; H, 6.07; N, 7.58.
(4′S)-4′-Eth oxy-2′,3′-d id eoxyth ym id in e (6). A solution of
coupled 11 (11 mg, 0.030 mmol) in MeOH (2 mL) was stirred
over 20% Pd(OH)2/C (4 mg) under an H2 atmosphere (1 atm)
for 1 h. Argon was bubbled through the solution. Filtration of
the reaction mixture through Celite and removal of solvent
afforded 6 as a white solid and as a 1:1 mixture of diastere-
omers (7.0 mg, 0.047 mmol, 88%): 1H NMR δ 9.1 (s, 1H), 9.05
(s, 1H), 7.43 (d, J ) 1.1 Hz, 1H), 7.34 (d, J ) 1.1 Hz, 1H), 6.45
(t, J ) 6.6 Hz, 1H), 6.26 (d, J ) 4.2 Hz, 0.5H), 6.24 (d, J ) 3.8
Hz, 0.5H), 3.9-3.5 (m, 8H), 2.7-2 (m, 8H), 1.95 (s, 1.5H), 1.9
(s, 1.5H), 1.24 (t, J ) 6.9 Hz, 1.5H), 1.17 (t, J ) 7 Hz, 1.5H));
13C NMR (400 MHz) δ 163.8, 163.7, 150.8, 150.4, 136.0, 135.8,
111.4, 109.9, 109.8, 86.3, 86.1, 63.0, 62.6, 57.7, 57.6, 33.1, 31.6,
30.8, 30.0, 15.7, 15.6, 12.6; IR (neat) 3430, 1692 cm-1; FAB-
HRMS calcd for C12H18N2O5 (M + 1): 271.1294, found 271.1289.
oil: [R]25 -55o (c ) 0.74, CH2Cl2); 1H NMR δ 7.16 (d, J ) 6.0
D
Hz, 1H), 6.21 (d, J ) 5.4 Hz, 1H), 3.89 (d, J ) 10.8 Hz, 1H),
3.77 (d, J ) 10.8 Hz, 1H), 3.52, (m, 1H), 3.38 (m, 1H), 1.17 (t,
J ) 6.9 Hz, 3H), 0.90 (t, J ) 3.7 Hz, 9H), 0.55 (q, J ) 7.7 Hz,
6H); 13C NMR δ 169.8, 152.4, 125.5, 110.1, 65.1, 59.9, 15.2,
6.7, 4.4; IR (neat) 1772, 1082 cm-1; FAB-HRMS calcd for
C
13H24O4Si (M + 1): 273.1522, found 273.1518.
(5S)-2-Acetoxy-5-eth oxy-5-(tr ieth ylsila n yloxym eth yl)-
2,5-d ih yd r ofu r a n (14). Acetate 14 (12.9 mg, 0.0408 mmol,
68%) was prepared by using the general procedure. The yellow
oil was a 1:1 mixture of diastereomers: 1H NMR δ 6.84 (s,
1H), 6.63 (s, 1H), 6.10 (m, 4H), 3.80 (m, 2H), 3.61, (m, 3H),
3.37 (m, 3H), 2.07 (s, 3H), 2.05 (s, 3H), 1.16 (t, J ) 6.9 Hz,
3H), 1.15 (t, J ) 6.9 Hz, 3H), 0.92 (m, 18H), 0.58 (m, 12H);
13C NMR δ 170.5, 170.1, 134.4, 133.6, 130.1, 129.9, 115.8,
114.8, 100.6, 99.0, 67.3, 66.5, 58.7, 58.2, 53.9, 21.2, 15.3, 15.2,
6.7, 4.4, 4.4.; IR (neat) 1751 cm-1; FAB-LRMS calcd for
C
13H26O3Si (M-OAc): 257.17, found 257.15.
(5′S)-5′-E t h oxy-5′-O-t r iet h ylsila n yl-2′,3′-d id eoxyd id e-
h yd r oth ym id in e (15). Protected nucleoside analogue 15 (80.8
mg, 0.211 mmol, 67%) was prepared by using the procedure
for protected nucleoside analogue 11. The anomers were
separated by preparative TLC (2:1 hexane/EtOAc × 2). high
Rf anomer: 1H NMR δ 8.24 (bs, 1H), 7.27 (s, 1H), 6.87 (s, 1H)
6.33 (dd, J ) 1.2 Hz, J ) 5.7 Hz, 1H), 6.04 (dd, J ) 0.9 Hz, J
) 5.4 Hz 1H), 3.93 (d, J ) 10.5 Hz, 1H), 3.65 (m, 3H), 1.91 (s,
3H), 1.12 (t, J ) 6.9 Hz, 3H), 0.96 (t, J ) 7.8 Hz, 9H), 0.62 (q,
J ) 7.8 Hz, 6H); low rf anomer: 1H NMR δ 8.70 (bs, 1H), 7.50
(s, 1H), 7.06 (s, 1H) 6.14 (d, J ) 6.0 Hz, 1H), 6.06 (d, J ) 6.3
Hz, 1H), 3.84 (s, 2H), 3.50 (m, 1H), 3.39 (m, 1H), 1.91 (s, 3H),
1.19 (t, J ) 6.9 Hz, 3H), 0.96 (t, J ) 8.1 Hz, 9H), 0.63 (q, J )
7.8 Hz, 6H); 13C NMR δ 163.5, 150.6, 135.8, 133.7, 130.8, 115.2,
110.7, 88.7, 65.8, 57.9, 15.3, 12.6, 6.8, 4.3; both anomers 13C
NMR δ 163.9, 150.9, 150.7, 135.9, 135.8, 135.0, 133.5, 130.9,
128.9, 115.1, 113.3, 111.1, 110.7, 88.7, 87.7, 65.8, 64.1, 58.7,
57.8, 15.5, 15.3, 12.5, 6.8, 6.7, 4.4, 4.3; IR (neat) 3187, 3058,
1699 cm-1; FAB-HRMS calcd for C18H31N2O5Si (M + H):
383.2002, found 383.2004.
(4′S)-4′-E t h oxy-2′,3′-d id eoxyd id eh yd r ot h ym id in e (7).
Protected nucleoside analogue 15 (42.8 mg, 0.112 mmol) was
dissolved in 4 mL of THF and then cooled to 0 °C. TBAF (1
M) in THF (0.12 mL, 0.12 mmol) was added via syringe. The
reaction was stirred at 0 °C until no starting material was
present (∼10 min) by TLC (silica gel, EtOAc). The reaction
was concentrated and purified by preparative TLC (100%
EtOAc) to yield both anomers of 7 as clear oils. The stereo-
chemistry of the anomers was determined by 2D spectroscopy
and NOE studies (see Supporting Information). (1R,4S) ano-
mer: (8.7 mg, 0.032 mmol, 29%): [R]25D +88° (c ) 0.35, CHCl3);
1H NMR δ 8.30 (bs, 1H), 7.35 (s, 1H), 7.12 (s, 1H), 6.23 (dd, J
) 6.0 Hz, J ) 1.8 Hz, 1H), 6.16 (d, J ) 5.7 Hz, 1H), 3.87 (d, J
) 11.7 Hz, 1H), 3.78 (d, J ) 12.9 Hz, 1H), 3.52 (m, 1H), 3.41
(m, 1H), 2.29 (bs, 1H), 1.88 (s, 3H), 1.20 (t, J ) 7.5 Hz, 3H);
13C NMR δ 163.4, 150.6, 135.8, 134.4, 130.8, 114.7, 111.2, 89.0,
(5S)-5-Eth oxy-5-(h yd r oxym eth yl)-5H-fu r a n -2-on e (12).
(-)-5-(Benzyloxymethyl)-5-ethoxy-5H-furan-2-one (5) (16 mg,
0.064 mmol) was dissolved in 1.5 mL of CH2Cl2 and cooled to
-78 °C. BCl3 (0.2 mL, 0.2 mmol) was added via syringe, and
the solution was stirred for 20 min. The reaction was quenched
cold with MeOH, and saturated aqueous Na2S2O3 was added.
The mixture was extracted with CH2Cl2, dried, and concen-
trated. The crude residue was purified by flash column
chromatography (2:1 hexane/EtOAc) to yield alcohol 12 (8.4
mg, 0.053 mmol, 82%): [R]25D -59o (c ) 1.13, CHCl3); 1H NMR
δ_7.27 (d, J ) 6.8 Hz, 1H), 6.27 (d, J ) 5.6 Hz, 1H), 3.87 (dd,
J ) 6.4 Hz, J ) 11.6 Hz, 1H), 3.73 (dd, J ) 7.2 Hz, J ) 11.6
Hz, 1H), 3.54, (m, 1H), 3.39 (m, 1H), 2.02 (t, J ) 7.2 Hz, 1H),
1.19 (t, J ) 6.8 Hz, 3H); 13C NMR δ 169.6, 152.4, 125.8, 109.5,
65.9, 58.2, 15.2, 12.4; IR (neat) 3447, 3177, 3057, 1695 cm-1
;
FAB-HRMS calcd for C12H17N2O5 (M + H): 269.1137, found
269.1138. (1S,4S) anomer: (9.2 mg, 0.034 mmol, 30%): [R]25
D
1
-66° (c ) 0.31, CHCl3); H NMR (400 MHz) δ 8.92 (bs, 1H),
7.21 (d, J ) 1.2 Hz, 1H), 6.94 (d, J ) 1.6 Hz, 1H), 6.37 (dd, J
) 6.0 Hz, J ) 2.0 Hz, 1H), 6.11 (dd, J ) 5.6 Hz, J ) 1.6 Hz,
J . Org. Chem, Vol. 67, No. 22, 2002 7653