M. E. Schnute et al. / Bioorg. Med. Chem. Lett. 18 (2008) 3856–3859
3859
Table 4
Broad-spectrum activity of 9a and 12a compared to that of 4-oxo-4,7-dihydrothieno[2,3-b]pyridine 1b, and established therapies
a
a,b
c
Compound
Polymerase IC50 (nM)
Antiviral IC50 (nM)
CC50
HCMV
HSV-1
VZV
a
/
c/d
HCMV
HSV-1
VZV
EBV
(lM)
1b
9a
12a
Ganciclovir
Acyclovir
Foscarnet
Aphidicolin
AZT-TPd
61 ( 1)
76 ( 5)
220 ( 80)
76
220
350
21
78
100
>20,000
>20,000
>20,000
100
3000
4300
5400
nd
2
20
90
nd
8100
200
400
nd
nd
6900
>100
>100
>100
>100
>100
26 ( 10)
170 ( 20)
1300
>20,000
2100
2,500
487 ( 74)
22,100
nd
nd
473 ( 90)
5800
<280 (
2600 (a
c
)
)
438 ( 136)
3300
2300 (d)
a
Values are means of at least two experiments where standard deviation is given in parentheses (nd = not determined).
Determined by plaque reduction assay (HCMV, Davis strain; HSV-1, KOS strain; VZV, Webster strain).
CC50, 50% cellular cytotoxicity in HFF cells derived from single determination, Ref. 21.
AZT-TP = zidovudine triphosphate.
b
c
d
became a solution as the mixture was stirred over 2 h. In a separate reaction
vessel, slurry of potassium ethyl malonate (530.5 g, 3.12 mol) and dry
Acknowledgments
a
acetonitrile (4560 mL) was cooled to 10–15 °C. Triethylamine (435 mL,
3.12 mol) was then added. Solid anhydrous MgCl2 (370 g, 3.89 mol) was
added portion-wise maintaining the reaction temperature below 25 °C. The
resulting slurry was stirred at room temperature for 2.5 h, and then the
previously prepared imidazolide solution was added via cannula maintaining
the temperature below 25 °C. The slurry was stirred overnight at room
temperature. The solvent was removed in vacuo and the residue was treated
with 0.5 N HCl (9.3 L) and toluene (4.6 L). The aqueous layer was extracted
with toluene (1.9 L) and the combined organic layers were washed with
saturated aqueous sodium bicarbonate (1.9 L). The organic layer was
concentrated to provide 317.9 g of 4 as a brown oil which could be used as
is in subsequent steps. 1H NMR (400 MHz, DMSO-d6) d ppm (major isomer)
7.80 (d, J = 2.3 Hz, 1H), 7.01 (d, J = 2.3 Hz, 1H), 4.09 (q, J = 7.1 Hz, 2H), 3.95 (s,
2H), 1.15 (t, J = 7.1 Hz, 3H); (minor isomer) 12.35 (s, 1H), 7.79 (d, J = 2.3 Hz,
1H), 7.00 (d, J = 2.3 Hz, 1H), 5.69 (s, 1H), 4.18 (q, J = 7.1 Hz, 2H), 1.22 (t,
J = 7.0 Hz, 3H).
The authors thank Garold Bryant for X-ray structural determi-
nations, Francis Schwende, Karen Wilkinson, and Bob Rush for
pharmacokinetic analysis, Kevin Stafanski for solubility measure-
ments, and Paul Herrington, William Perrault, William McGhee,
and Thomas Beauchamp for providing chiral aminoalcohols.
References and notes
1. (a) Fishman, J. A. N. Engl. J. Med. 2007, 357, 2601; (b) Steininger, C.;
Puchhammer-Stöckl, E.; Popow-Kraupp, T. J. Clin. Virol. 2006, 37, 1; (c)
Gaytant, M. A.; Steegers, E. A. P.; Semmekrot, B. A.; Merkus, H. M. M. W.;
Galama, J. M. D. Obstet. Gynecol. Surv. 2002, 57, 245.
2. (a) Gilbert, C.; Boivin, G. Antimicrob. Agents Chemother. 2005, 49, 873; (b)
Chakrabarty, A.; Pang, K. R.; Wu, J. J.; Narvaez, J.; Rauser, M.; Huang, D. B.;
Beutner, K. R.; Tyring, S. K. Expert Opin. Emerg. Drugs 2004, 9, 237; For
prospective therapies see: (c) Biron, K. K. In New Concepts of Antiviral Therapy;
Bogner, E., Holzenburg, A., Eds.; Springer: Dordrecht, The Netherlands, 2006; pp
309–336.
3. (a) Heininger, U.; Seward, J. F. Lancet 2006, 368, 1365; (b) Guenther, L. C. Exper.
Rev. Dermatol. 2006, 1, 607–618; (c) Kimberlin, D. W.; Whitley, R. J. N. Engl. J.
Med. 2007, 356, 1338; (d) Gnann, J. W., Jr.; Whitley, R. J. N. Engl. J. Med. 2002,
347, 340.
4. Thorley-Lawson, D. A.; Gross, A. N. Engl. J. Med. 2004, 350, 1328.
5. (a) Schnute, M. E.; Cudahy, M. M.; Brideau, R. J.; Homa, F. L.; Hopkins, T. A.;
Knechtel, M. L.; Oien, N. L.; Pitts, T. W.; Poorman, R. A.; Wathen, M. W.; Wieber,
J. L. J. Med. Chem. 2005, 48, 5794; (b) Schnute, M. E.; Anderson, D. J.; Brideau, R.
J.; Ciske, F. L.; Collier, S. A.; Cudahy, M. M.; Eggen, M.; Genin, M. J.; Hopkins, T.
A.; Judge, T. M.; Kim, E. J.; Knechtel, M. L.; Nair, S. K.; Nieman, J. A.; Oien, N. L.;
Scott, A.; Tanis, S. P.; Vaillancourt, V. A.; Wathen, M. W.; Wieber, J. L. Bioorg.
Med. Chem. Lett. 2007, 17, 3349.
12. General procedure for preparation of esters 5a–h.
A mixture of 4 (10.0 g,
46.2 mmol), triethylorthoformate (15.4 mL, 92.4 mmol), and acetic anhydride
(15.3 mL, 161.7 mmol) was heated to 135 °C with removal of ethyl acetate
distillate with
40 Torr (100 °C) and then at 0.2 Torr (65 °C, 1 h) to afford a black oil. The
resulting oil was dissolved in THF (50 mL) and corresponding amine
a Dean–Stark trap. After 3 h, volatiles were removed at
a
(50.8 mmol) was added while cooling in an ice bath. The mixture was
allowed to stir at room temperature for 20 h. A solution of potassium tert-
butoxide (1.0 M in THF, 50.8 mL, 50.8 mmol) was then added maintaining
the internal temperature below 0 °C. The mixture was allowed to warm to
room temperature and was then held at 30–40 °C for 1 h. The mixture was
diluted with ethyl acetate (400 mL) and satd aq ammonium chloride
(200 mL). The organic layer was washed with brine (50 mL), dried
(Na2SO4), and concentrated. The product was purified by column
chromatography. Yield from 3: 5a, 67%; 5b, 50%; 5c, 38%; 5d, 30%; 5e,
34%; 5f, 37%; 5g, 52%; 5h, 44%.
13. (a) Heaney, H.; Papageorgiou, G.; Wilkins, R. F. Tetrahedron Lett. 1988, 29, 2377;
(b) Heaney, H.; Papageorgiou, G.; Wilkins, R. F. Tetrahedron 1997, 53, 2941.
14. Dimmock, J. R.; Erciyas, E.; Bigam, G. E.; Kirkpatrick, D. L.; Duke, M. M. Eur. J.
Med. Chem. 1989, 24, 379.
15. X-ray determination employed the 4-bromobenzoate ester of 9a.
Crystallographic data have been deposited with the Cambridge
Crystallographic Data Centre as supplementary publication number CCDC
679175.
16. Tanis, S. P.; Evans, B. R.; Nieman, J. A.; Parker, T. T.; Taylor, W. D.; Heasley, S. E.;
Herrinton, P. M.; Perrault, W. R.; Hohler, R. A.; Dolak, L. A.; Hester, M. R.; Seest,
E. P. Tetrahedron: Asymmetry 2006, 17, 2154.
17. Assay methods have been previously decribed in Ref. 5 to assess inhibition of
compounds against viral DNA polymerases (HCMV, HSV-1, and VZV) and
6. (a) Snyder, H. R., Jr.; Ebetino, F. F. J. Heterocycl. Chem. 1966, 3, 202; (b) Bhupathy,
M.; Conlon, D. A.; Wells, K. M.; Nelson, J. R.; Reider, P. J.; Rossen, K.; Sager, J. W.;
Volante, R. P.; Dorsey, B. D.; Hoffman, J. M., Jr.; Joseph, S. A.; McDaniel, S. L. J.
Heterocycl. Chem. 1995, 32, 1283.
7. Ramsden, C. A.; Milata, V. Adv. Heterocycl. Chem. 2006, 92, 1.
8. Clay, R. J.; Collom, T. A.; Karrick, G. L.; Wemple, J. Synthesis 1993, 290.
9. El-Abadelah, M. M.; Sabri, S. S.; Al-Ashqar, H. A. Heterocycles 1997, 45, 255.
10. 2-Chloro-3-furoic acid (3). A solution of diisopropylamine (713 mL, 5.08 mol) in
dry THF (5.1 L) was cooled to less than ꢀ50 °C. A solution of 2.5 M n-butyl
lithium in hexanes (2033 mL, 5.08 mol) was added over 40 min maintaining
the temperature below ꢀ50 °C. A solution of 3-furoic acid (285 g, 2.54 mol) in
dry THF (1742 mL) was added maintaining the temperature below ꢀ70 °C. The
solution was stirred at ꢀ70 °C for 40 min and then
a
solution of
human DNA polymerases (a, c, and d). Antiviral activities against herpesviruses
were determined using plaque reduction assays (HCMV, VZV, and HSV-1) or
lytic replication (EBV) as described in Ref. 5.
hexachloroethane (662 g, 2.8 mol) in dry THF (1017 mL) was added
maintaining the temperature below ꢀ70 °C. The solution was stirred for 3 h
at ꢀ70 °C and then was allowed to warm to room temperature overnight. The
reaction mixture was quenched with water (10.9 L). The aqueous layer was
extracted with MTBE (5.8 L) and then acidified with 2 N HCl to a pH 1–2. The
product was extracted into ethyl acetate (2 ꢁ 3.8 L), and then the solvent was
removed in vacuo to provide a solid. Recrystallization from water (7.5 L)
provided 233 g (82%) of 3 as pale tan crystals on cooling to 0–5 °C overnight.
Mp 135.3–137.5 °C; 1H NMR (400 MHz, DMSO-d6) d ppm 13.06 (br s, 1H), 7.75
(d, J = 2.3 Hz, 1H), 6.80 (d, J = 2.3 Hz, 1H); 13C NMR (100 MHz, DMSO-d6) d ppm
162.42, 143.38, 140.12, 113.78, 112.65; MS (ESI+) m/z 147 (M+H). Anal. Calcd
for C5H3ClO3: C, 40.98; H, 2.06. Found: C, 40.83; H, 1.90.
18. Liu, S.; Knafels, J. D.; Chang, J. S.; Waszak, G. A.; Baldwin, E. T.; Deibel, M. R., Jr.;
Thomsen, D. R.; Homa, F. L.; Wells, P. A.; Tory, M. C.; Poorman, R. A.; Gao, H.;
Qiu, X.; Seddon, A. P. J. Biol. Chem. 2006, 281, 18193.
19. Thomsen, D. R.; Oien, N. L.; Hopkins, T. A.; Knechtel, M. L.; Brideau, R. J.;
Wathen, M. W.; Homa, F. L. J. Virol. 2003, 77, 1868.
20. Compounds were dosed IV at 5 mg/kg and PO at 15 mg/kg using a vehicle of
80/20 PEG400/0.01 M methanesulfonic acid.
21. Toxicity of compounds to non-infected mammalian cells was determined using
replicating HFF cells seeded as subconfluent monolayers and treated with
compound for 3 days. Cell viability determinations were performed using both
microscopic evaluation and a quantitative neutral red dye uptake assay as
previously described. Lowik, C. W. G. M.; Alblas, M. J.; van de Ruit, M.;
Papapoulos, S. E.; van der Pliijm, G. Anal. Biochem. 1993, 213, 426.
11. Ethyl 3-(2-chloro-3-furyl)-3-oxopropanoate (4).
A solution of 3 (228.0 g,
1.56 mol) in dry THF (373 mL) was added over 30 min to a slurry of N,N0-
carbonyldiimidazole (278.3 g, 1.72 mol) in dry THF (2280 mL). The slurry