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isomer I is the only structure that can explain the observed
NOE correlations, and thus 3 is in the anti-configuration.
The assignments of the configurations of 3 in the assemblies
4d2+@3 and 5d2+@3 are also supported by 1D NMR spectra.
For 3-syn, the alkyl groups of 1 and 2 experience similar chemi-
cal environments and should have similar chemical shifts. Al-
though in 3-anti, the two alkyl groups locate at the two sides
of the asymmetric aromatic backbone and experience different
chemical environments and thus may show different chemical
shifts. This is actually observed: The signals of two butyl
1
groups are almost indistinguishable in the H NMR spectrum of
4d2+@3 (e.g., see protons 11 and 11’ in the Supporting Infor-
mation, Figure S1f), whereas they show clearly different chemi-
1
cal shifts in the H NMR spectrum of 5d2+@3 (e.g., see protons
11 and 11’ in the Supporting Information, Figure S1b). This fur-
ther consolidates our assignments of 4d2+@3-syn and 5d2+
@3-anti. In addition, in the models of 4d2+@3-syn and 5d2+
@3-anti, only one alkyl group of the guests sits inside the host
cavity. This is also in line with the large upfield shift of alkyl
groups of guests.[29] Therefore, the structures of 4d2+@3-syn
and 5d2+@3-anti can be unambiguously assigned. Based on
the COSY and ROESY spectra (the Supporting Information,
Figures S4–S9), we can assign all the peaks in Figure 1b and c.
Besides the difference on the host alkyl protons, the more
diagnostic differences between these two host isomers are the
chemical shifts and patterns of protons b and c next to the
imine groups.[30]
Figure 4. a) Cavity sizes, and b) lengths of 3-syn and 3-anti, and c) structural
parameters of guests 4d2+ and 5d2+. These structures are the energy mini-
mized structures at the AM1 level of theory. The butyl groups in the hosts
were shortened to methyl groups for viewing clarity.
length in 4d2+ will significantly affect the template effect and
thus the distribution of 3-syn and 3-anti: An alkyl linker that is
too short will cause steric clashes between DABCO and the
host, disfavoring the formation of [1+1] macrocycle; however,
one that is too long will release the steric hindrance between
DABCO and the long cavity of 3-anti, thus encouraging the for-
mation of 3-anti. However, the change on the alkyl group of
5d2+ may not obviously influence the predominance of 3-anti.
To test this hypothesis, guest series 42+ and 52+ (Scheme 1)
with the alkyl length from two to eight methylene groups
It is striking that only one equivalent of template can
transform a complex dynamic covalent library into a dynamic
covalent assembly with well-controlled configuration in such
a dramatic and clean way. In particular, the predominant exis-
tence of 5d2+@3-anti is remarkable: Not only the host consti-
tution and configuration is well controlled through the guest
templation, but also the orientation of the guest inside the
asymmetric cavity of the host is perfectly aligned. High preci-
sion on tuning both the host structure and the “secondary
structure” of the final complex is achieved.
1
have been synthesized. H NMR experiments of the equimolar
mixture of 1, 2, and the individual guest have been performed
(the Supporting Information, Figures S10 and S17), and the
ratios between 3-syn and 3-anti in the presence of different
guests are listed in Table 1. Guests 4a2+ and 4b2+ with alkyl
lengths that are too short do not fit to any host cavity, show-
ing no obvious formation of 3. Four methylene groups in 4c2+
seems to be long enough to avoid the destructive steric repul-
sion between DABCO and the thin cavity of 3-syn. However,
broadened signals are already observed, suggesting the exis-
tence of unspecific structures. For the guests with longer than
five methylene groups, compound 3-anti was observed to-
gether with 3-syn, as confirmed by ROESY NMR and MS experi-
ments (the Supporting Information, Figures S11–S16). Their
ratio changes drastically by increasing the alkyl lengths of the
guests. For the guest 4g2+ with eight methylene groups, the
syn and anti isomers exist in an almost equal amount. This
supports our hypothesis that longer alkyl group releases the
potential steric repulsion between DABCO and 3-anti, encour-
aging the formation of 3-anti. In addition, for the guests 4e2+
–4g2+, there are also broadened peaks, indicating the exis-
tence of unspecified structures. Clearly, guest 4d2+ with five
methylene units, which can perfectly control the balance be-
tween the formation of [1+1] macrocycle and the selection of
the configuration, is the perfect fit to the cavity of 3-syn.
Origin of selectivity over syn/anti configuration
What determines the high selectivity of templates 4d2+ and
5d2+ in the formations of 3-syn and 3-anti, respectively? The
cavity sizes of 3-syn and 3-anti are similar (Figure 4a), but their
cavity lengths are remarkably different (Figure 4b): the cavity
of 3-syn is about 10 ꢁ long, whereas the length of the cavity of
3-anti is about 13 ꢁ. In addition, the cavity of 3-syn is narrow,
precluding the encapsulation of the bulky DABCO. In contrast,
the cavity of 3-anti is more open, and can shallowly swallow at
least one DABCO group.
The length between two quaternary nitrogen atoms in 4d2+
is 10 ꢁ (Figure 4c), which fits perfectly the cavity of 3-syn,
whereas the length of the effective binding site of 5d2+ also
matches that of the cavity of 3-anti. Guest 4d2+ has only one
more DABCO than the effective binding site of 5d2+. Thus, it
may be the second DABCO on 4d2+ that prevents the forma-
tion of 3-anti due to steric hindrance, leading to the quantita-
tive formation of 3-syn. If that is true, changing the alkyl
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Chem. Eur. J. 2014, 20, 1 – 9
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