Synthesis and Immunology of N-Acyl GM3
Journal of Medicinal Chemistry, 2005, Vol. 48, No. 3 881
pressure. The residue was purified by column chromatography
to afford 10 (515 mg, 90%) as a white solid: Rf 0.30 (acetone
and toluene 1:1); [R]D +2.4 (c 1.0, CHCl3). 1H NMR (CDCl3,
600 MHz): δ 7.13 (d, 1 H, J 7.8 Hz, NH), 6.25 (d, 1 H, J 9.2
Hz, NH), 5.70 (m, 1 H, J 6.0, 10.8, 16.8 Hz, CH2dCH), 5.39
(m, 1 H, J 4.2 Hz, H-8′′), 5.34 (d, 1 H, J 8.4 Hz, H-7′′), 5.19
(dd, 1H, J 9.0, 10.2 Hz, H-2), 5.18 (t, 1 H, J 10.2 Hz, H-3),
4.98 (d, 1 H, J 16.8 Hz, CH2dCH), 4.92 (d, 1 H, J 10.2 Hz,
CH2dCH), 4.90 (d, 1 H, J 9.0 Hz, H-1), 4.88 (dd, 1 H, J 5.0,
10.8 Hz, H-4′′), 4.76 (dd, 1H, J 9.0, 9.6 Hz, H-2′), 4.46 (d, 1 H,
J 7.8 Hz, H-1′), 4.38 (d, 1 H, J 11.4 Hz, H-9′′a), 4.33 (d, 1 H,
J 10.8 Hz, H-6′′), 4.22 (d, 1 H, J 10.2 Hz, H-3′), 4.7 (m, 2 H),
4.13 (dd, 1 H, J 12.0, 4.2 Hz, H-6), 4.04-4.00 (m, 2 H), 3.94
(q, 1 H, J 10.2 Hz, H-5′′), 3.74 (m, 1 H, J 9.0 Hz, H-4), 3.72 (s,
3 H), 3.67 (d, 1 H, J 8.4 Hz, H-5), 3.58 (t, 1 H, J 6.0 Hz, H-5′),
3.35 (bs, 1 H, H-4′), 2.82 (d, 1 H, J 3.6 Hz, OH), 2.64 (m, H-3′′e),
2.26 (m, 2 H), 2.18 (m, 2 H), 2.06, 2.03, 2.02, 2.01, 2.00, 1.98,
1.97, 1.96, 1.94 (9s, 9 × 3H, OAc), 1.70 (dd, 1 H, J 12.6, 12.0
Hz, H-3′′a). 19F NMR (CDCl3): δ -76.7 (s). 13C NMR (CDCl3,
50 MHz): δ 172.7, 171.2, 170.9, 170.7, 170.6, 170.6, 170.5,
169.8, 169.7, 169.4, 168.2, 158.0 (q, J 37.6 Hz), 136.4, 115.8,
115.0 (q, J 285 Hz), 100.8, 96.9, 77.9, 75.1, 74.5, 72.5, 71.7,
71.0, 69.6, 68.6, 68.5, 68.4, 66.9, 66.8, 62.7, 62.1, 61.9, 53.2,
48.7, 37.8, 35.6, 28.9, 21.4, 20.9, 20.8, 20.7, 20.7, 20.6, 20.5,
20.4, 20.3. FABMS Calcd for C47H64F3N2O28 [M + H]+: 1161.4.
Found: 1162.0. Calcd for C47H63F3N2NaO28 [M + Na]+: 1183.4.
Found: 1184.0.
N-{O-[5-Acylamido-3,5-dideoxy-D-glycero-r-D-galacto-
non-2-ulopyranosylonic acid]-(2f3)-O-(â-D-galactopyra-
nosyl)-(1f4)-â-D-glucopyranosyl} 4-Pentenamide (11a-
e). Compound 10 (500 mg, 0.45 mmol) was dissolved in 0.5 N
NaOH (30 mL), and the mixture was stirred at room temper-
ature for 10 h. After neutralization and condensation under
reduced pressure, the crude product was directly used for the
acylation. To a solution of the resultant amine (20 mg, 0.03
mmol) in 2.5 mL of MeOH and 0.5 mL of NaOH (0.5 N) was
added 0.1 mL of an acyl anhydride dropwise in an ice-water
bath. After the reaction finished within 6 h as indicated by
TLC, the mixture was condensed under reduced pressure. The
residue was purified on a Biogel P-2 column with H2O as the
eluent. Fractions containing the expected product were com-
bined and freeze-dried to afford various N-acyl GM3 deriva-
tives 11a-e.
+ H]+: 834.4. Found: 834.7. HR-FABMS Calcd for C29H48N2-
NaO19 [M + Na]+: 751.2749. Found: 751.2532.
N-{O-[5-Butanoylamido-3,5-dideoxy-D-glycero-r-D-ga-
lacto-non-2-ulopyranosylonic acid]-(2f3)-O-(â-D-galac-
topyranosyl)-(1f4)-â-D-glucopyranosyl} 4-Pentenamide
(11c, 19 mg, 87%): [R]D 3.1 (c 0.7, MeOH). 1H NMR (D2O, 600
MHz): δ 5.74 (m, 1 H, J 6.6, 10.2, 16.8 Hz, CH2dCH), 4.96
(dd, 1 H, J 1.2, 17.4 Hz, CH2dCH), 4.90 (d, 1 H, J 10.2 Hz,
CH2dCH), 4.83 (d, 1 H, J 9.6 Hz, H-1), 4.39 (d, 1 H, J 7.8 Hz,
H-1′), 3.97 (dd, 1 H, J 3.0, 9.6 Hz), 3.42 (dd, 1 H, J 1.8, 9.0
Hz), 3.28 (dd, 1 H, J 9.0, 9.6 Hz), 2.62 (dd, 1 H, J 12.0, 4.2 Hz,
H-3′′e), 2.29 (m, 2 H), 2.24 (m, 2 H), 2.13 (t, 2 H, J 7.2 Hz,
COCH2CH2CH3), 1.66 (t, 1 H, J 12.0 Hz, H-3′′a), 1.47 (m, 2 H,
COCH2CH2CH3), 0.77 (t, 3 H, J 7.8 Hz, COCH2CH2CH3).
FABMS Calcd for C30H50N2NaO19 [M + Na]+: 765.3. Found:
765.4. Calcd for C30H49N2Na2O19 [M - H + 2Na]+: 787.3.
Found: 787.3. Calcd for C34H62N3O21 [M + DEA + H]+: 848.4.
Found: 848.8. HR-FABMS Calcd for C34H62N3O21 [M + DEA
+ H]+: 848.3876. Found: 848.3874.
N-{O-[5-iso-Butanoylamido-3,5-dideoxy-D-glycero-r-D-
galacto-non-2-ulopyranosylonic acid]-(2f3)-O-(â-D-ga-
lactopyranosyl)-(1f4)-â-D-glucopyranosyl} 4-Pentena-
mide (11d, 21 mg, 94%): [R]D 2.8 (c 1.0, MeOH). 1H NMR
(D2O, 600 MHz): δ 5.74 (m, 1 H, J 6.0, 10.2, 16.8 Hz, CH2d
CH), 4.95 (d, 1 H, J 16.2 Hz, CH2dCH), 4.90 (d, 1 H, J 10.2
Hz, CH2dCH), 4.83 (d, 1 H, J 9.0 Hz, H-1), 4.39 (d, 1 H, J
7.2 Hz, H-1′), 3.97 (dd, 1 H, J 3.0, 9.6 Hz), 3.28 (t, 1 H, J 9.0
Hz), 2.62 (dd, 1 H, J 12.0, 4.2 Hz, H-3′′e), 2.38 (m, 1 H,
COCHMe2), 2.29 (m, 2 H), 2.20 (m, 2 H), 1.66 (t, 1 H, J 12.0
Hz, H-3′′a), 0.96, 0.95 (2 d, 2 × 3 H, J 6.6 Hz, COCHMe2).
HR-FABMS Calcd for C30H50N2NaO19 [M + Na]+: 765.2905.
Found: 765.2936. Calcd for C30H49N2Na2O19 [M - H + 2Na]+:
787.2725. Found: 787.2728.
N-{O-[5-Phenylacetamido-3,5-dideoxy-D-glycero-r-D-
galacto-non-2-ulopyranosylonic Acid]-(2f3)-O-(â-D-ga-
lactopyranosyl)-(1f4)-â-D-glucopyranosyl} 4-Pentena-
mide (11e, 20 mg, 83%): [R]D 1.1 (c 0.7, MeOH). 1H NMR
(D2O, 600 MHz): δ 7.25-7.15 (m, 5 H), 5.73 (m, 1 H, J 7.0,
10.2, 16.8 Hz, CH2dCH), 4.96 (d, 1 H, J 1.2, 17.4 Hz, CH2d
CH), 4.89 (d, 1 H, J 10.2 Hz, CH2dCH), 4.83 (d, 1 H, J 9.0 Hz,
H-1), 4.37 (d, 1 H, J 7.8 Hz, H-1′), 3.99 (dd, 1 H, J 2.0,
9.6 Hz), 3.42 (s, 2 H, PhCH2), 3.28 (t, 1 H, J 7.2 Hz), 3.22
(dd, 1 H, J 9.0 Hz), 2.62 (dd, 1 H, J 4.0, 12.2 Hz, H-3′′e), 2.29
(m, 2 H), 2.21 (m, 2 H), 1.77 (t, 1 H, J 12.2 Hz, H-3′′a). HR-
FABMS Calcd for C34H50N2NaO19 [M + Na]+: 813.2905.
Found: 813.2907. Calcd for C34H49N2Na2O19 [M - H + 2Na]+:
835.2725. Found: 835.2750.
N-{O-[5-Acylamido-3,5-dideoxy-D-glycero-r-D-galacto-
non-2-ulopyranosylonic acid]-(2f3)-O-(â-D-galactopy-
ranosyl)-(1f4)-â-D-glucopyranosyl} 4-Oxo-butanamide
(12a-e). Ozone was bubbled into individual solutions of
11a-e (0.02 mmol) in MeOH (5 mL) at -78 °C until a blue
color appeared and remained (ca. 30 min). The solutions were
kept at -78 °C for another 10 min, and then nitrogen was
introduced to remove the remaining ozone. After Me2S (0.2
mL) was added at -78 °C, the resulting solution was allowed
to warm to room temperature over a period of 1 h and stand
for another 1 h before it was condensed in a vacuum. The crude
product was purified on a Sephadex G10 column using distilled
water as the eluent to give the aldehyde products 12a-e as
white solids, which were directly used in the conjugation
reactions without further purification.
N-{O-[5-Acetamido-3,5-dideoxy-D-glycero-r-D-galacto-
non-2-ulopyranosylonic acid]-(2f3)-O-(â-D-galactopyra-
nosyl)-(1f4)-â-D-glucopyranosyl} 4-Pentenamide (11a, 20
1
mg, 92%): [R]D 2.4 (c 0.7, MeOH). H NMR (D2O, 600 MHz):
δ 5.73 (m, 1 H, J 6.6, 10.2, 17.2 Hz, CH2dCH), 4.96 (dd, 1 H,
J 1.8, 17.2 Hz, CH2dCH), 4.90 (dd, 1 H, J 1.8, 10.2 Hz, CH2d
CH), 4.83 (d, 1 H, J 9.0 Hz, H-1), 4.39 (d, 1 H, J 7.8 Hz, H-1′),
3.96 (dd, 1 H, J 3.0, 9.6 Hz), 3.80 (dd, 1 H, J 1.8, 12.6 Hz),
3.66-3.45 (dd, 1 H, J 1.8, 10.2 Hz), 3.44 (dd, 1 H, J 9.6, 10.2
Hz), 3.28 (dd, 1 H, J 9.0, 9.6 Hz), 2.61 (dd, 1 H, J 12.6, 4.8 Hz,
H-3′′e), 2.28 (m, 2 H), 2.24 (m, 2 H), 1.88 (s, 3 H, COCH3),
1.65 (t, 1 H, J 12.0 Hz, H-3′′a). FABMS Calcd for C28H46N2-
NaO19 [M + Na]+: 737.2. Found: 737.3. Calcd for C28H45N2-
Na2O19 [M - H + 2Na]+: 759.2. Found: 759.3. Calcd for
C32H58N3O21 [M + DEA + H]+: 820.3. Found: 820.4. HR-
FABMS Calcd for C28H46N2NaO19 [M + Na]+: 737.2592.
Found: 737.2422.
N-{O-[5-Propionylamido-3,5-dideoxy-D-glycero-r-D-ga-
lacto-non-2-ulopyranosylonic acid]-(2f3)-O-(â-D-galac-
topyranosyl)-(1f4)-â-D-glucopyranosyl} 4-Pentenamide
(11b, 20 mg, 91%): [R]D 2.1 (c 1.0, MeOH). 1H NMR (D2O, 600
MHz): δ 5.74 (m, 1 H, J 6.6, 10.2, 16.8 Hz, CH2dCH), 4.96
(dd, 1 H, J 1.8, 17.4 Hz, CH2dCH), 4.91 (dd, 1 H, J 1.8, 9.6
Hz, CH2dCH), 4.83 (d, 1 H, J 9.0 Hz, H-1), 4.39 (d, 1 H, J 8.4
Hz, H-1′), 3.80 (dd, 1 H, J 2.4, 12.6 Hz), 3.42 (t, 1 H, J 10.2
Hz), 3.28 (dd, 1 H, J 9.0, 9.6 Hz), 2.62 (dd, 1 H, J 12.6, 4.8 Hz,
H-3′′e), 2.28 (m, 2 H), 2.24 (m, 2 H), 2.15 (q, 2 H, J 7.8 Hz,
CH3CH2CO), 1.79 (t, 1 H, J 12.6 Hz, H-3′′a), 0.91 (t, 3 H, J 7.8
Hz, CH3CH2CO). FABMS Calcd for C29H48N2NaO19 [M + Na]+:
751.3. Found: 751.4. Calcd for C29H47N2Na2O19 [M - H +
2Na]+: 773.3. Found: 773.5. Calcd for C33H60N3O21 [M + DEA
N-{O-[5-Acetamido-3,5-dideoxy-D-glycero-r-D-galacto-
non-2-ulopyranosylonic acid]-(2f3)-O-(â-D-galactopyra-
nosyl)-(1f4)-â-D-glucopyranosyl} 4-Oxo-butanamide (12a).
1H NMR (D2O, 300 MHz): δ 5.05 (d, 1 H, J 9.0 Hz, H-1), 4.98
(t, 1 H, J 6.0 Hz, CHO), 4.54 (d, 1 H, J 7.7 Hz, H-1′), 3.96 (dd,
1 H, J 2.7, 9.7 Hz), 2.76 (dd, 1 H, J 12.6, 4.9 Hz, H-3′′e), 2.46
(m, 1 H), 2.38 (m, 2 H), 2.02 (s, 3 H, COCH3), 1.9 (m, 1 H),
1.79 (t, 1 H, J 12.5 Hz, H-3′′a). FABMS Calcd for C27H44N2-
NaO20 [M + Na]+: 739.3. Found 739.4. Calcd for C27H44N2-
KO20 [M + K]+: 755.2. Found 755.4. HR-FABMS Calcd for
C31H53N3NaO21 [M - H2O + DEA + Na]+: 826.3067. Found: