Organic Letters
Letter
clearly highlighted by the fact that to date no synthetic strategy
has succeeded in delivering a completely natural fengycin
peptide and, only very recently, a solid phase peptide synthesis
(SPPS) approach which enabled the synthesis of several
fengycin analogues was reported.26 While this marked a
significant advance for the field, the reported approach only
afforded modest product yields and it did not address the issue
of the fengycin peptides’ innate instability.
To address the challenges associated with both the synthesis
and stability of fengycins, we proposed to prepare a series of
modified and simplified analogues (Figure 1B). To solve the
issue of its chemical stability we hypothesized that fengycin
derivatization into a lactam-bridged cyclopeptide, rather than
through its natural ester functionality, would enable access to
more stable cyclic analogues. This approach has been shown
previously in the literature to help improve the chemical
stability of a range of cyclic peptides.27−29 Second, in order to
simplify and reduce the associated cost of the synthesis we
sought to replace the D-allo-Thr residue at position R4 and also
remove the chiral hydroxyl center from the lipid tail. Herein,
we report an efficient SPPS route that allows ready access to
fengycin A analogues with enhanced antifungal and chemical
stability when compared to the natural product.
flexibility of the peptide chain, allowing for increased linear to
cyclic product conversions.
On this basis, we first designed a synthetic route for the
cyclic core, using a Fmoc/(tBu/Boc)/Dmab protection
scheme, that could take advantage of the presence of a natural
L-Gln residue in the peptide structure to install a side-chain
anchor to the resin (Figure 2). Under this strategy, Fmoc-
Glu(OH)-ODmab (1) is thus attached in the first step of the
synthesis to the Rink-amide resin. Dmab protection was
selected as it is orthogonal to base-labile Fmoc and acid-labile
tBu/Boc protecting groups and its selective removal can
proceed quantitatively in the presence of hydrazine (2−5% v/v
in DMF).30 Other options, such as allyl esters, have proven on
occasion in our hands to be difficult to deprotect.31,32
To test the suitability of this approach, we synthesized
model peptidyl-resin 5 following standard Fmoc/tBu chemistry
procedures. Peptide 5 mimics the sequence of the fengycin
3
cyclic domain but for the Tyr-10Ile depsi-bridge, which was
replaced for an amide bond linkage by using Boc-4-(Fmoc-
amino)-L-phenylalanine (3) (Figure 2A, see Supporting
Information for complete experimental details). Then, we
proceeded to evaluate the efficiency of the intramolecular
cyclization step (Figure 2B,C). For this, 5 was incubated
overnight in the presence of DIC/HOBt (3 mol equiv each; rt)
and sample aliquots of the resins before (5) and after
cyclization (6) cleaved in the presence of TFA/H2O/TIPS,
95:2.5:2.5% v/v. Satisfyingly, analysis of the crude materials by
LC/(ESI+)MS spectrometry at λ = 254 nm, characteristic of
the aromatic residues present, confirmed quantitative con-
version of the linear peptide 5 (m/z = 983.6 Da, tR = 1.1 min;
[M + H]+; Figure 2B) to the expected cyclic product 6 (m/z =
965.7 Da, tR = 1.4 min; [M + H]+; Figure 2C).
Not constrained by the limitations imposed by the natural
depsi-bridge, we sought to design possible SPPS routes that
could achieve efficient cyclization yields and enable flexible
peptide diversification on resin (Figures 2 and 3). We
hypothesized that a strategy based on an early stage peptide
cyclization, rather than a late-stage peptide macrolactamiza-
tion, would be beneficial due to the lower conformational
Next, we turned our attention to addressing the complexity
of the branched fengycin structure (Figure 3). For this,
peptidyl-resin 2 was resynthesized and the peptide sequence
extended until the key residue where the peptide bifurcates
(10, Figure 3B). At this critical point, we had anticipated the
need for a protected 4Aph derivative that could enable both
the temporal protection of the peptidyl-resin N-terminus and
the controlled propagation and ring closure of the peptide
through its aniline functionality.
We also considered that such a derivative must allow for
subsequent peptide Ct → Nt elongation by means of
conventional Fmoc amino acids, to prevent posterior
racemization and to minimize the need for custom-made
materials. Chemical orthogonality to the Rink-amide C-
terminus, side chain Boc/tBu, and Dmab protecting groups
was also needed in the protecting group approach selected.
Given the aforementioned factors we opted to synthesize the
NTrityl/NFmoc protected amino acid Trt-L-4(NFmoc)Aph-
OH (9, Figure 3A).
As described, in Figure 3A, amino acid 9 could be
synthesized in 4 steps from its commercially available Boc-4-
(Fmoc-amino)-L-phenylalanine precursor (3). First, the
carboxylic functionality in 3 was converted to its allyl ester
using K2CO3 (1 mol equiv) and allyl bromide (1.5 mol
equiv).33 Next, the Boc group was removed in TFA (20% v/v
in DCM) and the Trt protection of the N-terminus achieved
by slow addition of DIPEA (4 mol equiv) and Trt-Cl (1.5 mol
equiv) in CH3CN/DCM 2:1. Lastly, selective removal of the
allyl protecting group in 8 with Pd(PPh3)3 and PhSiH3 in
DCM afforded the expected Trt-L-4(NFmoc)Aph-OH (9)
with sufficient purity that it could be readily incorporated into
Figure 2. (A) Synthesis of cyclic peptidyl-resin 6. LC/(ESI+)MS
traces of cleaved sample aliquots of 5 before (B) and after cyclization
(C) showing quantitative conversion to the cyclic product 6 (λ= 254
nm).
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Org. Lett. 2021, 23, 4672−4676