W. Choung, et al.
Bioorganic&MedicinalChemistryLettersxxx(xxxx)xxx–xxx
Table 4
Table 2
Oral rodent PK of compounds 18 and 19.
Activation of PPARγ with 1,2,4-oxadiazole derivatives.
Comp. No. Species (10 mpk) t1/2 (h) Tmax (h) Cmax (ng/mL)
AUClast
(ng·h/mL)
18
19
Rat
1.78
1.18
0.82
0.30
0.33
0.33
1318
949
889
584
581
Mouse
Mouse
547
group was fixed to methyl and isopropyl and the agonist potential was
measured as a ratio of activation versus Pioglitazone, a TZD full agonist
(Table 2). As expected from the results shown in Table 1, compounds 16
(93% and 98%, respectively). However, they disclosed more than 3-fold
difference of potency, EC50, as compound 18 revealed excellent EC50
value of 0.28 μM versus 1.05 μM of compound 16. Subsequent R1 re-
placement of methyl in compound 18 by isopropyl improved Amax in ca.
30% but with compromised EC50 of 0.59 μM (2-fold decrease) (com-
pound 19). On the contrary to the t-butyl (R2) series (compounds 18 vs
19), the other examples including the compounds 20–25 containing
cyclopropyl, benzyl, and 4-fluorobenzyl groups on R2 clearly demon-
strated the positive effects of bulkier R1 (isopropyl) on EC50s, though
the effects were found overall weaker than the t-butyl analogs. Re-
garding PPARγ activation, unlike the EC50s, the series of compounds
were unable to disclose clear SAR tendency with the exception of 4-
fluorobenzyl derivatives which showed relatively weaker activation
potential (compounds 24–25). Continued tendency of weaker activa-
tion of 4-fluorobenzyl derivatives was also observed in the other elec-
tron deficient fluorobenzyl derivatives such as 3-fluorobenzyl and 3,5-
difluorobenzyl compounds, 27 and 28, respectively. Despite the cross
substitutions of R1 and R2 relative to compound 16, compound 26 re-
mained its decent EC50 and Amax values similar to compound 16. Ad-
ditional hydrogen bonding acceptor represented by the ether func-
tionalities of compounds 29 and 30 was not found beneficial to EC50s as
well as activation potentials. Overall, the potency (EC50) seemed im-
proved when R1 is isopropyl versus methyl while no such tendency was
observed on the efficacy (Amax). In terms of R2 variations, alkyls, par-
ticularly branched ones proved their beneficial effects not only to the
Amax but to the EC50 as well. Largely based on the submicromolar po-
tencies as well as high activation potentials, compounds 18
(EC50 = 0.28 μM, Amax ratio = 98%) and 19 (EC50 = 0.59 μM, Amax
ratio = 123%) were selected to proceed for further evaluation.
Comp. No R1
R2
EC50
(μM)†
16
18
19
20
21
22
23
24
25
26
27
28
29
30
isopropyl methyl
methyl t-butyl
1.05
0.28
0.59
4.25
2.55
1.75
1.14
2.41
1.48
1.32
1.39
93
98
isopropyl t-butyl
123
89
methyl
cyclopropyl
isopropyl cyclopropyl
102
105
92
methyl
benzyl
isopropyl benzyl
methyl
4-fluorobenzyl
81
isopropyl 4-fluorobenzyl
80
methyl
methyl
methyl
methyl
methyl
isopropyl
101
82
3-fluorobenzyl
3,5-di-fluorobenzyl 1.38
72
methoxyethyl
4.21
3.39
68
methoxymethyl
60
†
EC50 and Amax were obtained through reporter gene analysis by measuring
concentration dependent luciferase induction in cell lines (Indigo USA) trans-
fected with PPRE and luciferase genes.
‡
The Amax value is a percentage value calculated relative to Pioglitazone.
oxadiazole, E (Fig. 1). As expected, compounds 13 and 14 disclosed
respectively. Even aromatic substitution on R2 with 2-fluorophenyl re-
vealed Amax ratio of 150% which is definitely superior to the similar
analogs of other heteroaromatic series (compounds 7 and 9). The en-
couraging results of 1,2,4-oxadiazole (E) spontaneously led us to exploit
the reversed 1,2,4-oxadiazole (F) relative to the substitution pattern of
R1 and R2. Indeed, even the subtle variation explicitly revealed the
superior effects of reversed 1,2,4-oxadiazole (F) motif on PPARγ acti-
vation. Comparison of compound 16 (R2 = Me, Amax ratio = 207%)
and compound 18 (R2 = t-butyl, Amax ratio = 331%) to the derivatives
with same substituents on R1 and R2 in other heteroaromatic series
clearly demonstrated the enhanced effect of the reversed 1,2,4-ox-
adiazole (F) motif. As such, the comparison of PPARγ activation among
various 5-ring heteroaromatics apparently revealed superior activity of
1,2,4-oxadiazoles over the others. In particular, the series of 1,2,4-ox-
adiazole isomer F which seemed more potent than isomer E was chosen
for further SAR evaluation. The potency improvement caused by the
subtle configurational change derived by mutual exchange of hetero
atoms (N and O) in isomer F was intrigued but found inexplicable via
docking analysis.
terms of CYP inhibitions, liver microsomal stabilities, and mouse PK,
which were predictable from the similarity of the molecular structures.
Compound 18 could maintain its edge to the compound 19 in the field
of hERG inhibition. The fact that both compounds had unexpectedly
low liver microsomal stabilities, particularly in rodent models, at least,
seemed to have plausible correlation with the modest plasma exposure
levels (Table 4) suggesting a tip helping to improve the poor exposure
(8.3% inhibition at 10 μM) versus compound 19 (16% inhibition at
10 μM), compound 18 was selected to proceed for further in vivo effi-
cacy studies to complete proof-of-concept (POC) evaluation. Although
Based on the results in Table 1 and our previous report,9 the R1
Table 3
In vitro profiling of compounds 18 and 19.
Comp. No
Microsomal stability (% remaining @30 min)
CYP inhibition (% remain activity @10uM)
M
R
D
H
1A2
2C9
2C19
2D6
3A4
18
19
8.3
16
11
24
12
13
11
13
17
12
88
92
57
33
84
78
93
89
64
50
†
% inhibition at 10 μM.
3