Journal of Medicinal Chemistry
Article
1
36.78, 139.21, 143.90, 147.36, 191.22. HRMS (ESI, m/z): for
(Z)-(2,2-Dimethyl-2,3-dihydro-1H-inden-5-yl) (1-(pent-2-en-1-
+
C H NO [M + H] calcd, 332.2009; found, 332.2006. mp 91−93
yl)-1H-indol-3-yl)methanone (GBD-012, 33). Obtained as white,
23
26
1
°
C. Purity (qNMR), 99.2%.
2,2-Dimethyl-2,3-dihydro-1H-inden-5-yl) (1-butyl-1H-indol-3-
yl)methanone (GBD-006, 27). Obtained as white, powdery crystals
powdery crystals (68% yield). H NMR (400 MHz, CDCl
3
): δ 1.07
(
(t, 3H), 1.17 (s, 6H), 2.24 (quint, 2H), 2.78 (s, 4H), 4.78 (app. d,
2H), 5.51−5.59 (m, 1H, J = 10.8 Hz, 6.8 Hz, 0.8 Hz), 5.68−5.76 (m,
1H, J = 10.7 Hz, 7.4 Hz, 0.8 Hz), 7.22−7.26 (m, 1H), 7.29−7.34 (m,
2H), 7.35−7.40 (m, 1H), 7.56−7.62 (m, 2H), 7.63 (s, 1H), 8.37−
1
(85% yield). H NMR (400 MHz, CDCl ): δ 0.93 (t, 3H), 1.19 (s,
3
6
7
7
H), 1.36 (sextet, 2H), 1.86 (quintet, 2H), 2.80 (s, 4H), 4.17 (t, 2H),
1
3
1
.23−7.27 (m, 1H), 7.29−7.35 (m, 2H), 7.36−7.41 (m, 1H), 7.58−
8.43 (m, 1H). C{ H}NMR (100 MHz, CDCl ): δ 14.00, 20.96,
3
1
3
1
.62 (m, 2H), 7.64 (s, 1H), 8.39−8.44 ppm (m, 1H). C{ H}NMR
28.72, 40.48, 43.79, 47.52, 47.73, 109.83, 115.91, 122.54, 122.58,
122.82, 123.36, 124.28, 125.14, 127.29, 127.60, 136.18, 136.83,
136.85, 139.17, 143.87, 147.38, 191.18. HRMS (ESI, m/z): for
(100 MHz, CDCl ) δ 13.63, 20.09, 28.73, 31.92, 40.48, 46.86, 47.52,
3
4
1
7.73, 109.77, 15.69, 122.41, 122.82, 123.31, 124.27, 125.14, 127.28,
+
27.45, 136.68, 136.76, 139.21, 143.90, 147.37, 191.20. HRMS (ESI,
C H NO [M + H] calcd, 358.2165; found, 358.2162. mp 70−71
2
5
28
+
m/z): for C H NO [M + H] calcd, 346.2165; found, 346.2163. mp
°C. Purity (qNMR), 99.5%.
24
28
7
0−72 °C. Purity (qNMR), 100.1%.
2,2-Dimethyl-2,3-dihydro-1H-inden-5-yl) (1-hexyl-1H-indol-3-
yl)methanone (GBD-007, 28). Obtained as white, powdery crystals
(2,2-Dimethyl-2,3-dihydro-1H-inden-5-yl) (1-(pent-4-en-1-yl)-
(
1H-indol-3-yl)methanone (GBD-013, 34). Obtained as light-yellow,
1
powdery crystals (74% yield). H NMR (400 MHz, CDCl ): δ 1.18
3
1
(82% yield). H NMR (400 MHz, CDCl ): δ 0.87 (t, 3H), 1.19 (s,
(s, 6H), 1.97 (quint, 2H), 2.09 (q, 2H), 2.79 (s, 4H), 4.16 (t, 2H),
5.01−5.04 (m 1H), 5.05−5.09 (m, 1H), 5.72−5.84 (ddt, 1H), 7.22−
7.26 (m, 1H), 7.29−7.34 (m, 2H), 7.35−7.40 (m, 1H), 7.56−7.61
3
6
7
7
H), 1.31 (m, 6H), 1.87 (quintet, 2H), 2.80 (s, 2H), 4.15 (t, 2H),
.23−7.27 (m, 1H), 7.29−7.36 (m, 2H), 7.37−7.41 (m, 1H), 7.57−
1
3
1
13
1
.62 (m, 2H), 7.64 (s, 1H), 8.39−8.44 ppm (m, 1H). C{ H}NMR
(m, 2H), 7.63 (s, 1H), 8.39−8.44 ppm (m, 1H). C{ H}NMR (100
(100 MHz, CDCl ): δ 13.97, 22.50, 26.54, 28.73, 29.83, 31.28, 40.48,
MHz, CDCl ): δ 28.72, 28.77, 30.67, 40.48, 46.24, 47.53, 47.73,
3
3
4
1
1
7.12, 47.53, 47.74, 109.77, 115.68, 122.41, 122.82, 123.31, 124.27,
25.15, 127.30, 127.47, 136.67, 136.75, 139.23, 143.88, 147.36,
109.75, 115.80, 116.17, 122.46, 122.86, 123.37, 124.28, 125.12,
127.26, 127.48, 136.69, 136.71, 136.79, 139.18, 143.88, 147.39,
+
+
91.20. HRMS (ESI, m/z): for C H NO [M + H] calcd, 374.2478;
191.18. HRMS (ESI, m/z): for C H NO [M + H] calcd, 358.2165;
2
6
32
25 28
found, 374.2477. mp 61−63 °C. Purity (qNMR), 99.7%.
2,2-Dimethyl-2,3-dihydro-1H-inden-5-yl) (1-isobutyl-1H-indol-
-yl)methanone (GBD-008, 29). Obtained as yellowish oil (53%
found, 358.2162. mp 78−79 °C. Purity (qNMR), 99.3%.
(
(2,2-Dimethyl-2,3-dihydro-1H-inden-5-yl) (1-(pent-2-yn-1-yl)-
3
1H-indol-3-yl)methanone (GBD-015, 36). Obtained as light-yellow,
1
1
yield). H NMR (400 MHz, CDCl ): δ 0.94 (d, 6H), 1.18 (s, 6H),
powdery crystals (55% yield). H NMR (400 MHz, CDCl ): δ 1.13
3
3
2
7
8
2
1
1
+
.23 (m, 1H), 2.79 (s, 4H), 3.94 (d, 2H), 7.22−7.26 (m, 1H), 7.28−
(t, 3H), 1.19 (s, 6H), 2.18−2.25 (qt, 2H), 2.79 (s, 4H), 4.88 (t, 2H),
.33 (m, 2H), 7.34−7.39 (m, 1H), 7.54−7.61 (m, 2H), 7.64 (s, 1H),
7.23−7.27 (m, 1H), 7.31−7.38 (m, 2H), 7.42−7.48 (m, 1H), 7.60−
1
3
1
13
1
.39−8.44 ppm (m, 1H). C{ H}NMR (100 MHz, CDCl ): δ 20.19,
7.68 (m, 2H), 7.77 (s, 1H), 8.39−8.45 (m, 1H). C{ H}NMR (100
3
8.72, 29.15, 40.46, 47.51, 47.71, 54.68, 109.97, 115.54, 122.37,
22.76, 123.29, 124.25, 125.16, 127.29, 127.40, 137.00, 137.16,
39.18, 143.89, 147.38, 191.23. HRMS (ESI, m/z): for C H NO [M
H] calcd, 346.2165; found, 346.2161. Purity (qNMR), 98.5%.
1-Benzyl-1H-indol-3-yl) (2,2-dimethyl-2,3-dihydro-1H-inden-5-
yl)methanone (GBD-009, 30). Obtained as white, powdery crystals
MHz, CDCl ): δ 12.37, 13.58, 28.71, 37.02, 40.49, 47.53, 47.73,
3
71.93, 88.93, 109.79, 116.00, 122.70, 122.88, 123.53, 124.31, 125.15,
127.33, 127.63, 136.07, 136.48, 139.05, 143.85, 147.47, 191.18.
2
4
28
+
+
HRMS (ESI, m/z): for C H NO [M + H] calcd, 356.2009; found,
2
5
26
(
332.2007. mp 98−99 °C. Purity (qNMR), 96.8%.
(1-Allyl-1H-indol-3-yl) (2,2-dimethyl-2,3-dihydro-1H-inden-5-yl)-
1
(
86% yield). H NMR (400 MHz, CDCl ): δ 1.17 (s, 6H), 2.78 (s,
H), 5.37 (s, 2H), 7.11−7.15 (m, 2H), 7.21−7.35 (m, 7H), 7.58−
.62 (app. d, 1H), 7.64 (s, 2H), 8.42−8.46 ppm (m, 1H). C{ H}-
methanone (GBD-016, 37). Obtained as yellowish oil (81% yield).
3
1
4
7
H NMR (400 MHz, CDCl ): δ 1.18 (s, 6H), 2.79 (s, 4H), 4.76 (m,
3
1
3
1
2H), 5.10−5.17 (m, 1H), 5.23−5.28 (m, 1H), 5.94−6.04 (m, 1H),
NMR (100 MHz, CDCl ): δ 28.71, 40.47, 47.50, 47.71, 50.74, 110.14,
7.22−7.26 (m, 1H), 7.29−7.38 (m, 3H), 7.57−7.61 (m, 2H), 7.64 (s,
3
1
3
1
1
1
1
3
16.25, 122.64, 122.82, 123.63, 124.31, 125.16, 126.78, 127.31,
27.52, 128.10, 128.98, 135.92, 136.96, 137.02, 139.01, 143.91,
47.52, 191.24. HRMS (ESI, m/z): for C H NO [M + H] calcd,
80.2009; found, 380.2005. mp 111−114 °C. Purity (qNMR), 99.6%.
2,2-Dimethyl-2,3-dihydro-1H-inden-5-yl) (1-(4-fluorobenzyl)-
H-indol-3-yl)methanone (GBD-010, 31). Obtained as white,
1H), 8.41−8.45 ppm (m, 1H). C{ H}NMR (100 MHz, CDCl ): δ
3
28.67, 40.43, 47.46, 47.66, 49.33, 109.97, 116.01, 118.39, 122.50,
122.74, 123.42, 124.25, 125.04, 127.23, 127.39, 132.07, 136.60,
136.80, 139.04, 143.87, 147.40, 191.17. HRMS (ESI, m/z): for
+
2
7
26
+
(
C H NO [M + H] calcd, 330.1852; found, 330.1848. Purity
2
3
24
1
(
qNMR), 98.3%.
1
powdery crystals (90% yield). H NMR (400 MHz, CDCl ): δ 1.18
3
Ethyl 2-(3-(2,2-Dimethyl-2,3-dihydro-1H-indene-5-carbonyl)-1H-
(
(
s, 6H), 2.78 (s, 4H), 5.34 (s, 2H), 6.98−7.04 (m, 2H), 7.09−7.14
indol-1-yl)acetate (GBD-018, 39). Obtained as yellowish oil (28%
yield). H NMR (400 MHz, CDCl ): δ 1.18 (s, 6H), 1.26 (t, 3H),
1
m, 2H), 7.24 (m, 1H), 7.28−7.35 (m, 3H), 7.58−7.65 (m, 3H),
3
1
3
1
8
4
1
1
.40−8.43 ppm (m, 1H). C{ H}NMR (100 MHz, CDCl ): δ 28.70,
2.78 (s, 4H), 4.22 (q, 2H), 4.86 (s, 2H), 7.22−7.36 (m, 4H), 7.59−
3
1
3
1
0.49, 47.50, 47.71, 50.09, 110.02, 115.86, 116.06, 116.40, 122.72,
22.90, 123.72, 124.33, 125.15, 127.31, 127.55, 131.64, 128.50,
28.58, 136.68, 136.87, 138.95, 143.96, 147.62, 163.65, 191.20.
7.63 (m, 2H), 7.65 (s, 1H), 8.40−8.45 ppm (m, 1H). C{ H}NMR
(100 MHz, CDCl ): δ 14.10, 28.69, 40.47, 47.48, 47.70, 48.15, 62.11,
3
109.20, 116.80, 122.76, 122.91, 123.85, 124.32, 125.11, 127.21,
127.34, 137.10, 137.32, 138.89, 143.90, 147.60, 167.49, 191.28.
19
FNMR (376 MHz, CDCl ): δ −113.65. HRMS (ESI, m/z): for
3
+
+
C H FNO [M + H] calcd, 398.1915; found, 398.1911. mp 124−
HRMS (ESI, m/z): for C H NO [M + H] calcd, 376.1907; found,
27
25
24 26
3
1
26 °C. Purity (qNMR), 100.5%.
E)-(2,2-Dimethyl-2,3-dihydro-1H-inden-5-yl) (1-(pent-2-en-1-yl)-
H-indol-3-yl)methanone (GBD-011, 32). Obtained as white,
376.1904. Purity (qNMR), 96.5%.
(
(2,2-dimethyl-2,3-dihydro-1H-inden-5-yl) (1-methyl-1H-indol-3-
yl)methanone (GBD-004, 25). NaH (14.2 mg, 0.36 mmol) and
DMSO (1.0 mL) were mixed thoroughly in a round-bottom flask. In a
separate pear-shaped flask, 23 (51.4 mg, 0.18 mmol) and DMSO (1.5
mL) were heated to ∼40 °C to form a solution and then added slowly
to the NaH suspension. After stirring at ambient temperature for 30
min, (chloromethyl)trimethylsilane (0.03 mL, 0.21 mmol) was added.
The resulting mixture was stirred overnight at ambient temperature.
The reaction was quenched with water and extracted with ethyl
acetate (2 × 5 mL). The organic layer was washed with brine, dried
over Na SO , and concentrated under reduced pressure. Purification
1
1
powdery crystals (88% yield). H NMR (400 MHz, CDCl ): δ 0.98
3
(
t, 3H), 1.18 (s, 6H), 2.06 (quint, 2H), 2.79 (s, 4H), 4.69−4.74 (app.
d, 2H), 5.56−5.65 (m, 1H, J = 15.3 Hz, 6.0 Hz, 1.4 Hz), 5.71−5.80
(
m, 1H, J = 15.4 Hz, 6.2 Hz, 1.4 Hz), 7.22−7.27 (m, 1H), 7.29−7.35
(m, 2H), 7.36−7.42 (m, 1H), 7.58−7.62 (m, 2H), 7.65 (s, 1H),
1
3
1
8
2
1
1
.39−8.44 (m, 1H). C{ H}NMR (100 MHz, CDCl ): δ 13.21,
5.18, 28.72, 40.48, 47.52, 47.72, 48.94, 110.05, 115.86, 122.46,
22.70, 122.77, 123.33, 124.28, 125.14, 127.30, 127.52, 136.47,
3
36.85, 137.27, 139.17, 143.87, 147.38, 191.20. HRMS (ESI, m/z):
2
4
+
for C H NO [M + H] calcd, 358.2165; found, 358.2163. mp 80−
by automatic flash column chromatography on silica gel (gradient
elution from 5 to 40% EtOAc-hexanes) afforded white, powdery
25
28
82 °C. Purity (qNMR), 99.1%.
6
391
J. Med. Chem. 2021, 64, 6381−6396