Analytical Chemistry
Page 2 of 7
To test the above hypothesis, we implemented a developꢀ (dd, J = 8.7, 2.0 Hz, 1H), 6.86 (dd, J = 9.8, 1.2 Hz, 1H), 6.31
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mental program to identify novel reactionꢀbased fluorescent
probes for biothiol and thiophenol based on pyrimidine chemꢀ
istry via a combinatorial strategy. To accelerate the developꢀ
mental progress, probe candidates were prepared by parallel
synthesis and crude products were directly screened by fluoꢀ
rescence measurement without elaborate purification. In conꢀ
sequence, ResꢀBiot and FluꢀPht were identified as fluorescent
probes for biothiol and thiophenol respectively. Their practical
utility in chemical and biological contexts was well demonꢀ
strated. Particularly, ResꢀBiot enabled the direct visualization
of endogenous biothiol fluctuations during oxidative stress and
cell apoptosis in both living cells and living animals. At the
same time, FluꢀPht demonstrated its capability of visualizing
thiophenol without the interference from endogenous biothiols
in living cells.
(d, J = 1.2 Hz, 1H). C NMR (75 MHz, DMSOꢀd ): δ 185.60,
6
165.63, 156.78, 155.41, 154.69, 149.37, 148.24, 144.29,
139.92, 135.10, 134.69, 131.18, 119.22, 109.69, 106.09.
+
+
HRMS (ESI): calculated for C H N O (M+H ) 337.0567,
16
9
4
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found 337.0506.
FluꢀPht was synthesized from fluorescein and 4ꢀ
chloropyrimidine according to the above general procedure.
The obtained crude product was further purified by column
chromatography on silica gel (dichloromethane/methanol,
1
00:1 v/v) to afford a light yellow solid (22 mg, 45% yield).
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H NMR (400 MHz, CDCl ): δ 8.80 (s, 2H), 8.63 (d, J = 5.6
3
Hz, 2H), 8.06 (d, J = 7.5 Hz, 1H), 7.73 (t, J = 7.3 Hz, 1H),
7
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.67 (t, J = 7.4 Hz, 1H), 7.29 (d, J = 7.6 Hz, 1H), 7.16 (s, 2H),
.98 (d, J = 5.6 Hz, 2H), 6.90 (s, 4H). C NMR (100 MHz,
13
CDCl ): δ 169.13, 168.65, 158.98, 158.80, 153.84, 152.74,
3
1
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52.08, 135.44, 130.30, 129.47, 126.51, 125.46, 124.28,
17.84, 116.67, 110.38, 1+09.00, 8+1.84. HRMS (ESI):
EXPERIMENTAL SECTION
Materials and Instruments. Unless otherwise stated, all
reagents and solvents were obtained from commercial suppliꢀ
ers and used without further purification. Sartorius ultrapure
water (18.2 Mꢁ cm) was used throughout the experiments.
HRMS analysis was operated on a Bruker MaXis UHRꢀTOF
calculated for C H N O
489.1158.
(M+H ) 489.1193, found
28
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4
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RESULTS AND DISCUSSION
Design, Synthesis, and Screening of the Fluorescent
Probe Library. The pyrimidine moiety is expected to funcꢀ
tion as a novel recognition unit for biothiol/thiophenol. The πꢀ
electron density of pyrimidine ring is decreased to a large exꢀ
tent, which facilitates the S Ar pathway. Therefore, pyrimiꢀ
dine is expected to possess potential reactivity to nucleophile
1
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system. H NMR and C NMR spectra were taken on a
Bruker Advance 300 MHz or 400 MHz spectrometer using
tetramethylsilane as internal standard. The pH values were
measured with a Model pHꢀ3c digital pH meter. Fluorescence
spectra were recorded by a FLSꢀ980 fluorescence spectromeꢀ
ter equipped with a xenon lamp and 1.0ꢀcm quartz cells at the
slits of 2.0/2.0 nm. Cell imaging was taken with a Zeiss LSM
N
34−36
thiols.
Besides, pyrimidine ring can be modified by diꢀ
verse substituents to adjust its electronic characteristic. Acꢀ
cordingly, the chemical profile of the probe candidate can be
easily manipulated, which provides great potential to generate
ideal fluorescent probes with optimized reactivity and speciꢀ
ficity. Additionally, cytosine, thymine, and uracil, these three
pyrimidine derivatives are nucleobases of living organisms,
implying the excellent biocompatibility of pyrimidine moieꢀ
8
(
80 confocal laser scanning microscope with an objective lens
×20). In vivo imaging was carried out on IVIS Lumina III
system with a metal halide lamp (150 W).
Parallel Synthesis of the Fluorescent Probe Library.
Resorufin (21.3 mg, 0.1 mmol) or fluorescein (33.2 mg, 0.1
mmol) was dissolved in 1.5 mL of DMF, 1.0 mmol of pyrimiꢀ
37,38
dine
reagent
(2ꢀchloropyrimidine,
2ꢀchloroꢀ4ꢀ
ty.
(
5
trifluoromethyl)pyrimidine, 4ꢀchloropyrimidine, or 2ꢀchloroꢀ
ꢀnitropyrimidine) and K CO (27.6 mg, 0.2 mmol) were addꢀ
2 3
As for the fluorophore platform, commercially available
resorufin and fluorescein are selected due to their outstanding
photophysical characteristics and excellent biocompatibility.
Besides, their fluorescence OFF/ON can be easily switched by
masking or exposing the hydroxyl group of these two fluoroꢀ
phores. Incorporating diversely substituted pyrimidine moieꢀ
ties onto resorufin or fluorescein via ether linkage generates a
novel probe library for thiols. We envisioned that fluorescence
emission of probe candidates would be quenched by hydroxyl
protection. Once thiolyzed by biothiol or thiophenol, the
fluorophore would be released and fluorescence emission reꢀ
stored. On the basis of the above consideration, we proposed a
diversityꢀoriented probe library consisting of eight candidates
ed. The reaction mixture was stirred at 70 °C. Chemical conꢀ
version was monitored by TLC analysis. After resorufin or
fluorescein was completely consumed, the above mixture was
added into 70 mL of ethyl acetate, and washed with 50 mL of
saturated NaCl solution three times. The organic solvent was
evaporated under reduced pressure. The crude product was
obtained and confirmed by HRMS analysis, and then screened
directly without further purification.
5,6
Rapid Screening of Probe Candidates. The above crude
products were dissolved in DMSO and diluted to 40 ꢂM with
0 mM PBS buffer solution, and then incubated with GSH
5
(
500 ꢂM) or thiophenol (500 ꢂM) at 37 °C for 60 min. For
(Figure
1).
Coupling
of
pyrimidinꢀ2ꢀyl,
4ꢀ
resorufin analogs, the fluorescence intensity was measured at
λex/em = 560/585 nm. For fluorescein analogs, the fluorescence
intensity was measured at λex/em = 460/519 nm.
(trifluoromethyl)pyrimidinꢀ2ꢀyl, pyrimidinꢀ4ꢀyl, and 5ꢀ
nitropyrimidinꢀ2ꢀyl moieties with resorufin furnishes probe
Resꢀ1−Resꢀ4 respectively. Similarly, integrating the four pyꢀ
rimidine moieties onto fluorescein platform generates probe
Fluꢀ1−Fluꢀ4.
Preparation and Characterization of Res-Biot and Flu-
Pht. ResꢀBiot was synthesized from resorufin and 2ꢀchloroꢀ5ꢀ
nitropyrimidine according to the above general procedure. The
obtained crude product was further purified by column chroꢀ
matography on silica gel (dichloromethane/methanol, 100:1
1
v/v) to afford a yellow solid (28 mg, 83% yield). H NMR
(
1
400 MHz, DMSOꢀd ): δ 9.50 (s, 2H), 7.96 (d, J = 8.7 Hz,
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H), 7.61 (d, J = 2.0 Hz, 1H), 7.58 (d, J = 9.9 Hz, 1H), 7.42
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