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T. Arun et al. / Journal of Photochemistry & Photobiology, B: Biology 154 (2016) 67–76
Further, the ligand and metal complexes have been characterized
successfully by physicochemical and various spectroscopic techniques.
The bio-relevancy of these complexes have been efficiently examined
and explored by DNA binding, DNA cleavage and anti-microbial studies.
Finally, the docking analysis has been executed to confirm the mode of
binding of complexes with DNA.
(BM) 1.81; UV–Vis. in DMSO, nm (transition): 410 (LMCT) and 620
(d–d).
[CoL(bpy)Cl2]: Yield: 71%; brown color; Anal. Calc.(%): C (59.1), H
(4.6), N (8.1) and Co (8.5); Found (%): C (58.2), H (4.2), N (7.6)
and Cu (7.8); FT-IR (KBr) (cm−1): 1595 (−CH = N), 1592
(−C
=
N) (bpy), 354 (M-Cl) and 420 (M-N);
∧
m
(Ω−1 mol−1 cm2) 8.3; μeff (BM) 4.63; UV–Vis. in DMSO, nm
(transition): 388 (LMCT) and 560 (d–d).
2. Experimental
2.1. Materials
[NiL(bpy)Cl2]: Yield: 64%; yellow color; Anal. Calc (%): C (59.1), H
(4.6), N (8.1) and Ni (8.5); Found (%): C (57.3), H (4.1), N (7.5)
and Ni (8.2); FT-IR (KBr) (cm−1) 1602 (−C = N), 1588 (−C = N)
(bpy), 367 (M-Cl) and 434 (M-N); ∧m (Ω−1 mol−1 cm2) 7.2; μeff
(BM) 3.28; UV–Vis. in DMSO, nm (transition): 407 (LMCT) and 710
(d–d).
[ZnL(bpy)Cl2]: Yield: 68%; greenish yellow color; Anal. Calc (%) C
(58.5), H (4.6); N (8.0) and Zn (9.3); Found (%): C (57.6), H (4.2),
N (7.8) and Zn (8.7); FT-IR (KBr) (cm−1): 1598 (\\CHN), 15,854
(CN) (bpy), 362 (M–Cl) and 438 (M–N); 1H NMR (DMSO-d6)
δppm: (Ar–H) 6.4–7.5 (m), (\\CHN) 8.5 (s) and (\\O-CH3) 3.4
(s) ppm; 13C NMR (DMSO-d6): δppm 119.0–146.2 (Ar–C), 158.4
The chemicals involved in this work were of AnalaR grade and
were used without further purification. 3,4-dimethoxybenzal-
dehyde, o-phenylenediamine and 2,2′-bipyridine (bpy) were ob-
tained from Sigma Aldrich. Calf thymus DNA (CT DNA) (Himedia,
India) and pUC19 plasmid DNA (Bangalore Genei, India) were used
for DNA binding and cleavage studies. All other chemicals, solvents
and metal salts were procured from E-Merck, India.
2.2. Physical Measurements
Elemental analysis (C, H and N) data were obtained using a Perkin-
Elmer 240 elemental analyzer. Vibration spectra were performed on
FTIR–Shimadzu model IR-Affinity-1 spectrophotometer using KBr
discs. The NMR spectra of the ligand and Zn(II) complex were recorded
on a Bruker Advance DRX 300 spectrometer operating at room temper-
ature (RT). RT magnetic susceptibility measurements were carried out
on a modified Gouy-type magnetic balance, Hertz SG8-5HJ. The molar
conductivity of the complexes in DMSO solution (10−3 M) was
measured in a deep vision 601 model digital conductometer at RT. The
EPR spectrum was accomplished at liquid N2 temperature (77 K)
using tetracyanoethylene (TCNE) as the g-marker. Shimadzu Model
1601 UV–Visible spectrophotometer and Hitachi F–2500 fluorescence
spectrophotometer were employed to attain the electronic and fluores-
cence spectra, respectively. Cyclic voltammetric (CV) experiments were
achieved on a CHI 620C electrochemical analyzer in freshly distilled
DMSO solution.
(\\CHN), 153.3 (\\CN) and 53.4 (\\O-CH3) ppm;
(Ω−1 mol−1 cm2) 16.4; μeff (BM) diamagnetic; UV–Vis. in DMSO,
nm (transition): 380 (LMCT).
∧
m
2.5. Biological Evaluation
The methods used in the biological evaluation (DNA binding, DNA
cleavage and antimicrobial screening) are detailed in supplementary file.
2.6. Docking Analysis
Docking analysis of L and its metal complexes have been performed
using HEX 6.3 software which is an interactive molecular graphics
program for the interaction, docking calculations and to identify
possible docked poses of the biomolecules. The crystal structure of
DNA duplex of sequence d(CGCGAATTCGCG)2 dodecamer (PDB ID:
1BNA) is downloaded from the protein data bank.
2.3. Synthesis of Schiff Base (L)
For the synthesis of Schiff base ligand (L), an ethanolic solution of
3,4-dimethoxybenzaldehyde (0.2 mM) was added to an ethanolic
solution of o-phenylenediamine (0.1 mM) and the resultant mixture
was refluxed for 4 h. The solid product formed was filtered, washed
and recrystallized from ethanol, dried in vacuo.
[L] Yield: 76%; yellow color; Anal. Calc.(%): C (71.2), H (5.9) and N
(6.9); Found (%): C (70.1), H(5.4) and N (6.5); FT-IR (KBr) (cm−1):
1608 (\\HCN), 2880–2920 (C\\H) and 1400–1600 (CC); 1H NMR
(DMSO-d6) δppm: (Ar–H) 6.4–7.5(m), (\\CHN) 8.6(s), and (\\O-
CH3) 3.4(s) ppm; 13C NMR (DMSO-d6): δppm 119.0–146.2 (Ar–C),
159.7 (\\CHN) and 53.4 (\\O-CH3) ppm; UV–Vis. in DMSO, nm
(transition): 254 (π–π*) and 370 (n-π*)
3. Results and Discussion
New bio-essential metal based complexes were synthesized from
Schiff base ligand (L) and 2,2′-bipyridine. L and derived complexes are
found to be stable over the extended periods. These complexes have
been characterized by spectral techniques such as FT-IR, UV–visible,
1H NMR, 13C NMR, EPR, Mass, elemental analysis, magnetic susceptibil-
ity and molar conductivity measurements. L is soluble in common
organic solvents whereas metal complexes are only soluble in DMF
and DMSO.
3.1. Elemental Analysis and Molar Conductivity Measurements
2.4. Synthesis of Metal Complexes
The general synthetic pathway for the heterocyclic Schiff base ligand
(L) and its mixed ligand metal complexes is given in Scheme 1. The very
similarity between the obtained elemental analysis data of L and the
metal complexes suggests the stoichiometry, [ML(bpy)Cl2]. The DMSO
solution of the metal complexes shows lower molar conductance values
(7.2–16.4 Ω−1 cm2 mol−1) which might be due to the non-electrolytic
nature of the complexes.
To synthesize metal complexes, an equimolar mixture of Schiff base
ligand (L) (0.1 mM), metal chloride (0.1 mM) and 2,2′-bipyridine
(0.1 mM) was mixed in a portion of ethanol (40 mL) and the resultant
mixture was refluxed for 8 h. The resultant product was washed with
ethanol and then recrystallized. The obtained solid product was filtered,
dried in vacuo at 60 °C and kept in a desiccator.
[CuL(bpy)Cl2]: Yield: 69%; brown color; Anal. Calc.(%): C (58.7),
H (4.6), N (8.1) and Cu (9.1); Found (%): C (57.2), H (4.3), N (7.6)
and Cu (8.3); FT-IR (KBr) (cm−1): 1598 (\\CHN), 1586 (\\CN)
(bpy), 376 (M–Cl) and 454 (M–N); ∧m (Ω−1 mol−1 cm2) 12.4; μeff
3.2. FT-IR Spectra
The FT-IR spectra of ligand (L) and metal complexes were compared
and shown in Fig. S1. The IR spectrum of ligand (L) [Fig. S1(a)], shows