A. Valle et al. / Process Biochemistry 46 (2011) 358–364
359
O
OH
O
H CO
O
OH
O
samples for aerobic and anaerobic conditions, respectively, were withdrawn at 0,
3
9
and 24 h. The samples were harvested by centrifugation for 10 min at 10,509 × g
and the supernatants were filtered through 0.22 m nylon filters prior to analysis
by high-performance liquid chromatography (HPLC).
N
N
Two kinds of control experiments were performed: a biotic control, i.e. a bacte-
rial culture without addition of precursor, and several abiotic controls, i.e. culture
medium supplemented with the same concentrations of precursor tested with-
out inoculum. The controls were kept under the same conditions of agitation and
temperature as for the related experiments.
OH
OH
DIBOA
DIMBOA
Fig. 1. Natural benzoxazinones. 2,4-dihydroxy-(2H)-1,4-benzoxazin-3-(4H)-one
DIBOA) and 2,4-dihydroxy-7-methoxy-(2H)-1,4-benzoxazin-3-(4H)-one (DIM-
A biotransformation experiment was subsequently carried out in order to con-
firm the identities of the reaction products. In this process, E. coli was cultivated in
the presence of 0.75 mg/mL of precursor. The culture was monitored by Thin Layer
Chromatography (TLC) during 48 h. After this time, the bacterial culture was cen-
trifuged for 10 min at 10,509 × g. The supernatant was withdrawn and the pellet
was resuspended in distilled water and centrifuged again. The total supernatant
from both centrifugations (free of cells) was extracted ten times with ethyl acetate
(EtOAc) at room temperature. The solvent was removed from the organic phase on
(
BOA) [10].
formation of the corresponding hydroxylamine [12,15–17]. This
kind of biotransformation is quite similar to the second stage of the
process outlined in Fig. 2. This fact suggested that these microor-
ganisms could be capable of carrying out this step.
The reduction of the nitro groups via hydroxylamines can be
attributed to nitroreductases [18,19]. In the Enterobacteriaceae
family, in addition to the species Escherichia coli, several enzymes
with nitroreductase activity have been characterized in Enterobac-
ter cloacae [20], particularly a xenobiotic reductase that reduces
nitro groups on the ring to give the hydroxylamine derivative of
TNT [21].
◦
a rotary evaporator under reduced pressure at 35 C. The resulting crude extract
was chromatographed on silica gel columns, using hexane/EtOAc with increasing
polarity (from 1:4 to 1:1 (v/v)).
2
.4. Analytical methods
2.4.1. Spectrophotometry
Bacterial growth experiments were monitored by following the increase in
turbidity of the culture at 600 nm using a UV spectrophotometer (Model HITACHI U-
2001). The bacterial population was represented by counting colony-forming units
The aim of the work described here was to explore the possibility
of replacing the second step in the chemical synthesis of D-DIBOA
by a biotransformation using a strain of E. coli and a strain of Serratia
marcescens.
per mL (CFU/mL); this measure was correlated with turbidity by the McFarland scale
[23]. All cultures were carried out in duplicate; the values presented are the mean
of two experiments.
2
.4.2. High-performance liquid chromatography (HPLC)
Reverse-phase HPLC analysis was performed on a Merck HITACHI HPLC system
2
. Materials and methods
equipped with an L-7100 LaChrom quaternary gradient pump, an L-7200 LaChrom
autoinjector and an L-7455 LaChrom diode array detector (DAD). Data were collected
and processed using a Merck HITACHI D-7000 HPLC data system. Instrumental con-
2.1. Microorganisms and chemicals
®
ditions were Phenomenex Gemini C18 (4.6 mm × 250 mm) reversed-phase column
The strain E. coli JM109 (ATCC 53323)/pGEM4Z (Promega) was obtained from
◦
at 25 C. Mobile phases were as follows: water: 1% AcOH (A) and MeOH:1% AcOH (B)
ATCC. S. marcescens strain N2 belongs to the microbial collection of the Metal
Biotechnology Laboratory, Biology Faculty, Havana University. This strain was iso-
lated from a lateritic deposit from Moa, Holguin (Cuba) [22].
at a flow rate of 1 mL/min. The injection volume was 15 L. The following gradient
was used for separation: at 0 min, 0% B; 7 min, 30% B; 30 min, 40% B; 35 min, 100%
B.
ꢀ
The starting compound used to study the biotransformation was ethyl 2-(2 -
Chromatogram analysis was carried out using HPLC System Manager software
Version 4.1 with the diode array detector set at 253 nm by comparing the retention
times (RT) and ultraviolet/visible spectra with those of the chemical standards.
The fractions eluted from the silica gel column were further purified by HPLC
on semipreparative silica gel (Lichrospher Si-60, 10 m) columns using a mixture
of hexane/EtOAc (6:4, v/v).
nitrophenoxy)acetate, which is henceforth referred to as the precursor.
Chemical standards of the precursor and D-DIBOA were synthesized from 2-
nitrophenol as described by Macías et al. [6]. The reagents were purchased from
Sigma–Aldrich and the culture media from Panreac, FLUKA and Cultimed. All organic
solvents were HPLC grade.
2
.2. Media
2
.4.3. Nuclear magnetic resonance (NMR)
1H and 13C NMR spectra were run on Varian INOVA-400 spectrometers. Chemical
The inoculums required for experimentation were obtained by seeding bacteria
1
shifts are given in parts per million (ppm) with respect to the residual H signal of
deuterated chloroform (CDCl ) (ı 7.25) and the C signal of chloroform (CHCl ) (ı
3 3
7
from conservation strains in Luria-Bertani broth (LB). The inoculum/medium ratio
was 1:10 (v/v) and the bacteria were grown overnight at 30 C in Erlenmeyer flasks.
These pre-inoculums were used to inoculate (10%, v/v) test systems for both aerobic
and anaerobic conditions.
1
3
◦
7.00).
In aerobic experiments LB broth was inoculated (100 mL final volume) in Erlen-
meyer flasks that were kept in an orbital incubator at 150 rpm and 30 C. For
2.4.4. Thin layer chromatography (TLC)
◦
TLC was carried out on Alugram Sil G/UV254 plates (Merck) with a layer thick-
ness of 0.25 mm with fluorescent indicator. Chromatography plates were developed
by treatment with oleum prepared with a solution of sulphuric acid, water and acetic
anaerobic cultures LB broth was inoculated (50 mL final volume) in sealed vials and
◦
incubation was carried out at 30 C under static conditions.
◦
acid (1:4:20) (v/v) followed by heating at 150 C. The sample spots were observed
2.3. Biotransformation experiments
using a UV lamp at 254 or 360 nm.
Strains used in this study were selected for their ability to reduce nitro groups
2.5. Biotransformation yield
of TNT as this indicates that they may be capable of performing the reduction of the
nitro group in the precursor.
For quantitative analysis, stock solutions of each individual chemical standard
were prepared by dissolving accurate amounts in LB broth with 1% MeOH (v/v).
Working D-DIBOA standard solutions of 0.25, 0.125, 0.0625, 0.0313 mg/mL were
obtained by dilution of the 0.5 mg/mL stock. These solutions were used to generate
the external standard response calibration curves for subsequent measurements
of D-DIBOA concentrations from bacteria culture samples. Hydroxamic acids could
The transformation of the precursor was initiated by adding 1 mL of stock pre-
cursor solutions diluted in methanol (MeOH) for the aerobic culture, or 0.5 mL for the
anaerobic culture, to achieve concentrations of 0.25, 0.5 and 1.0 mg of precursor/mL.
The inoculation was performed from cultures of strains E. coli and S. marcescens in
the exponential phase of growth (10%, v/v). During the incubation, 1 mL and 0.5 mL
ꢀ
Fig. 2. Benzohydroxamic acid synthesis: (A) first step: synthesis of ethyl 2-(2 -nitrophenoxy)acetate (2) (the precursor) using nitrophenol (1) as starting material and (B)
second step: reduction of the precursor nitro group to obtain D-DIBOA (3) [6].