F. Sodano et al.
Bioorganic Chemistry 111 (2021) 104911
J = 18.4 Hz) & 4.61 (d, J = 18.5 Hz) (1H), 3.43 – 3.29 (m) & 3.26 – 3.21
126.8, 114.3, 113.6, 105.0, 97.0, 96.2, 46.2, 45.1, 39.0, 13.9, 12.6. ESI-
1
3
+
(
m) (2H), 1.32 (t, J = 7.1 Hz) & 1.16 (t, J = 7.2 Hz) (3H). C NMR (150
MS [M] : m/z 593.5. HPLC purity ≥ 95% (CH
3
CN 0.1% TFA/H
2
O 0.1%
MHz, CDCl
3
) δ = 169.7, 156.3, 155.4, 137.7 & 137.5, 133.1 & 133.0,
TFA 70:30 (v/v), flow = 1.0 mL/min, t
R
= 9.5 min), at 226, 254 and 580
1
4
30.8 & 130.6, 128.1 & 128.0, 127.8 & 127.7, 119.3 & 119.2, 111.0,
nm.
+
4.8 & 44.4, 41.0, 14.0 & 12.4. ESI-MS [M + H] : m/z 369.3 and [M +
2-Bromo-N-ethyl-N-(2-hydroxyethyl)benzamide (19). Intermediate 17
(2.29 mmol, 501 mg), dissolved in dry DCM (15 mL), was treated with 2-
(ethylamino)ethanol (22.9 mmol, 2.24 mL) and stirred for 3 h at room
temperature. After the reaction was complete, the mixture was washed
with water (2 × 15 mL), a saturated sodium bicarbonate solution (2 ×
+
H + 2] : m/z 371.3. HPLC purity ≥ 95% (CH
3 2
CN 0.1% TFA/H O 0.1%
TFA 70:30 (v/v), flow = 1.0 mL/min, t
-Carbamoyl-4-((2-(6-(diethylamino)-3-(diethyliminio)–3H-xanthen-
-yl)-N-ethylbenzamido)methyl)-1,2,5-oxadiazole 2-oxide (2). A solution
of
N-(9-(2-(chlorocarbonyl)phenyl)-6-(diethylamino)–3H-xanthen-3-
ylidene)-N-ethylethanaminium (1.29 mmol, 642 mg) [25] in dry DCM
30 mL) was treated with compound 15 (240 mg, 1.29 mmol) and an
R
= 4.2 min), at 226 and 254 nm.
3
9
15 mL) and 1 M HCl (2 × 15 mL), then dried over anhydrous Na
2 4
SO .
The organic layer was concentrated to dryness to give target compound
19 (311 mg, 50%). 1H and C NMR spectra of the compound showed
13
(
excess of triethylamine (0.5 mL), and the resulting solution was stirred
overnight. The reaction mixture was washed with saturated sodium bi-
carbonate solution (2 × 15 mL), water (2 × 15 mL) and 1 M HCl (2 × 15
the presence of two rotamers, which are caused by the carbamoyl
1
function. H NMR (600 MHz, CDCl
3
) δ = 7.59 – 7.56 (m) & 7.54 – 7.52
(m) (1H), 7.37 – 7.30 (m, 1H), 7.28 – 7.19 (m, 2H), 3.94 – 3.88 (m) &
3.88 – 3.81 (m) (2H), 3.67 – 3.51 (m, 1H), 3.38 – 3.29 (m) & 3.28 – 3.16
2 4
mL), then dried over anhydrous Na SO and concentrated to dryness.
1
3
Purification of the residue via silica gel chromatography, using DCM/
(m) (2H), 1.26 (t, J = 7.1 Hz) & 1.07 (t, J = 7.2 Hz) (3H). C NMR (150
MeOH (98/2, v/v) as the eluent, gave target compound 2 as a mirrored
MHz, CDCl
3
) δ = 170.9 & 169.3, 138.5 & 138.2, 133.0 & 132.8, 130.5 &
1
13
purple solid (144 mg, 18%). H and C NMR spectra of the compound
130.2, 128.3 & 127.8, 127.7 & 127.6, 119.3 & 119.3, 62.2 & 60.3, 49.9
& 48.5, 45.2 & 40.2, 14.0 & 12.4.
showed the presence of two rotamers, which are caused by the carba-
1
moyl function. H NMR (600 MHz, CDCl
3
) δ = 7.71 – 7.64 (m, 2H), 7.63 –
4-(2-(2-Bromo-N-ethylbenzamido)ethoxy)-3-(phenylsulfonyl)-1,2,5-
oxadiazole 2-oxide (8). 3,4-bis(phenylsulfonyl)furoxan 20 (1.10 mmol,
403 mg) and 1,8-diazabicyclo[5.4.0]undec-7-ene (2.20 mmol, 0.328
mL) were added to a solution of compound 19 (1.10 mmol, 300 mg) in
dry DCM (10 mL). The resulting mixture was stirred for 4 h at room
temperature, subsequently washed with water (3 × 15 mL) and dried
7
.59 (m, 1H), 7.38 – 7.35 (m, 1H), 7.20 (d, J = 9.5 Hz, 2H), 6.95 – 6.89
(
m, 2H), 6.87 – 6.83 (m, 2H), 4.63 (s) & 4.58 (s) (2H), 3.73 – 3.55 (m,
8
7
H), 3.31 – 3.28 (m) & 3.21 – 3.16 (m) (2H), 1.67 (bs, 2H), 1.31 (t, J =
13
.0 Hz, 12H), 1.06 (t, J = 7.1 Hz) & 0.78 (t, J = 7.0 Hz) (3H). C NMR
(
150 MHz, CDCl
3
) δ = 169.6, 157.8, 155.6, 155.4, 154.5, 153.8, 136.1,
1
4
0
32.0, 130.4, 130.0, 129.8, 127.3, 113.8, 113.7, 110.6, 96.7, 46.2, 45.3,
2 4
over anhydrous Na SO . The organic layer was concentrated to dryness.
+
0.4, 13.9, 12.7. ESI-MS [M] : m/z 611.6. HPLC purity ≥ 95% (CH
3
CN
The crude product was purified via silica gel chromatography using
DCM/Acetone (98/2, v/v) and the desired compound 8 was obtained as
a colourless oil (430 mg, 79%). 1H and C NMR spectra of the com-
.1% TFA/H
2
O 0.1% TFA 70:30 (v/v), flow = 1.0 mL/min, t
R
= 7.1
13
min), at 226, 254 and 580 nm.
-((2-Bromo-N-ethylbenzamido)methyl)-3-cyano-1,2,5-oxadiazole 2-
4
pound showed the presence of two rotamers, which are caused by the
1
oxide (7). Trifluoroacetic anhydride (2.04 mmol, 0.290 mL) and pyri-
dine (1.02 mmol, 0.083 mL) were added to a solution of compound 6
carbamoyl function. H NMR (600 MHz, CDCl
3
) δ = 8.08 – 8.02 (m, 1H),
7.80 – 7.73 (m, 1H), 7.67 – 7.54 (m, 1H), 7.43 – 7.37 (m, 1H), 4.85 –
4.70 (m) & 4.52 – 4.45 (m) & 4.42 – 4.35 (m) (2H), 4.20 – 4.12 (m) &
4.08 – 4.01 (m) (1H), 3.90 – 3.82 (m) & 3.76 – 3.69 (m) (1H), 3.63 – 3.56
(m) & 3.50 – 3.42 (m) & 3.36 – 3.29 (m) (1H), 1.34 (t, J = 7.1 Hz) & 1.15
(
1.02 mmol, 377 mg) in dry DCM (20 mL), under positive N
2
pressure at
◦
0
C. The resulting solution was stirred for 3 h and subsequently washed
with saturated sodium bicarbonate solution (2 × 15 mL), water (1 × 15
mL) and brine (1 × 15 mL). The organic layer was dried over anhydrous
1
3
(t, J = 7.1 Hz) (3H). C NMR (150 MHz, CDCl ) δ = 169.6, 158.9, 138.1
3
Na
2
SO
4
and concentrated to dryness. The purification of the residue via
& 137.90, 136.0 & 135.8, 133.0 & 132.9, 130.6 & 130.5, 129.9 & 129.8,
128.8 & 128.7, 128.3 & 128.0, 127.9 & 127.6, 119.3, 110.7, 69.4 &
silica gel chromatography, using petroleum ether/EtOAc (80/20, v/v) as
1
+
the eluent, gave target compound 7 as a white solid (144 mg, 40%). H
68.89, 46.0 & 45.0, 43.4 & 40.4, 14.16 & 12.5. ESI-MS [M + H] : m/z
1
3
+
and C NMR spectra of the compound showed the presence of two
496.3 and [M + H + 2] : m/z 498.3. HPLC purity ≥ 95% (CH
3
CN 0.1%
1
rotamers, which are caused by the carbamoyl function. H NMR (600
TFA/H
2
O 0.1% TFA 70:30 (v/v), flow = 1.0 mL/min, t
R
= 7.0 min), at
MHz, CDCl
3
) δ = 7.62 – 7.58 (m, 1H), 7.42 – 7.37 (m, 1H), 7.36 – 7.33
226 and 254 nm.
(
m, 1H), 7.32 – 7.28 (m, 1H) 4.96 (d, J = 15.2 Hz, 1H), 4.71 (d, J = 15.2
4-(2-(2-(6-(Diethylamino)-3-(diethyliminio)–3H-xanthen-9-yl)-N-eth-
ylbenzamido)ethoxy)-3-(phenylsulfonyl)-1,2,5-oxadiazole 2-oxide (4). A
solution of N-(9-(2-(chlorocarbonyl)phenyl)-6-(diethylamino)–3H-
xanthen-3-ylidene)-N-ethylethanaminium 18 (0.96 mmol, 477 mg) [25]
in dry DCM (10 mL) was treated with 2-(((3-phenylsulfonylfuroxan-4-yl)
oxy)ethyl)ethylamine 24 (0.96 mmol, 300 mg) [38] and an excess of
triethylamine (0.4 mL), and the resulting solution was stirred for 24 h.
The reaction mixture was washed with water (2 × 15 mL) and a satu-
rated sodium bicarbonate solution (4 × 15 mL), then dried over anhy-
Hz, 1H), 3.45 – 3.28 (m) & 3.24 – 3.18 (m) (2H), 1.33 (t, J = 7.1H) &
1
3
1
.19 (t, J = 7.2 Hz) (3H). C NMR (150 MHz, CDCl
3
) δ = 169.9, 153.9,
1
36.7, 133.1, 131.0, 127.9, 119.2, 105.5, 97.0, 44.8 & 43.2, 39.9, 13.9
+
+
&
11.9. ESI-MS [M + Na] : m/z 373.3 and [M + Na + 2] : m/z 375.3.
CN 0.1% TFA/H O 0.1% TFA 70:30 (v/v), flow
= 5.06 min), at 226 and 254 nm.
HPLC purity ≥ 95% (CH
1.0 mL/min, t
3
2
=
R
3
-Cyano-4-((2-(6-(diethylamino)-3-(diethyliminio)–3H-xanthen-9-yl)-
N-ethylbenzamido)methyl)-1,2,5-oxadiazole 2-oxide (3). Trifluoroacetic
anhydride (0.346 mmol, 0.050 mL) and pyridine (0.173 mmol, 0.017
2 4
drous Na SO and concentrated to dryness. Purification of the residue
mL) were added to a solution of compound 2 (0.173 mmol, 112 mg) in
via silica gel chromatography, using DCM/Acetone (80/20, v/v) as the
◦
dry DCM (15 mL), under positive N
2
pressure at 0 C. The resulting
eluent, gave target compound 4 as a mirrored purple solid (200 mg,
1
13
solution was stirred for 3 h and subsequently washed with a saturated
27%). H and C NMR spectra of the compound showed the presence of
1
sodium bicarbonate solution (2 × 15 mL), water (2 × 15 mL) and brine
two rotamers, which are caused by the carbamoyl function. H NMR
(
2 × 15 mL). The organic layer was dried over anhydrous Na
2
SO
4
and
(600 MHz, CDCl
3
) δ = 8.05 (d, J = 7.8 Hz) & 7.99 (d, J = 7.7 Hz) & 7.93
concentrated to dryness. Purification of the residue via silica gel chro-
matography, using DCM/MeOH (98/2, v/v) as the eluent, gave target
compound 3 as a mirrored purple solid (54 mg, 50%). 1H NMR (600
(d, J = 7.7 Hz) (2H), 7.78 – 7.67 (m) & 7.65 – 7.60 (m) (6H), 7.38 – 7.29
(m, 3H), 6.95 – 6.90 (m) & 6.80 – 6.74 (m) (2H), 6.70 (d, J = 2.1 Hz,
2H), 3.99 (t, J = 4.8 Hz, 2H), 3.72 – 3.55 (m, 8H), 3.33 (q, J = 6.9 Hz,
2H), 1.34 – 1.23 (m, 12H), 1.17 (t, J = 7.0 Hz) & 0.63 (t, J = 6.9 Hz)
MHz, CDCl
m, 1H), 7.20 (d, J = 9.5 Hz, 2H), 6.98 – 6.94 (m, 2H), 6.72 (d, J = 2.4
Hz, 2H), 4.50 (s, 2H), 3.69 – 3.55 (m, 8H), 3.36 (q, J = 6.9 Hz, 2H), 1.32
3
) δ = 7.74 – 7.69 (m, 2H), 7.62 – 7.59 (m, 1H), 7.41 – 7.38
(
(3H). 13C NMR (150 MHz, CDCl
3
) δ = 169.3, 158.4, 157.7, 155.7, 137.8,
136.1 & 136.0, 132.3, 130.6 & 130.6, 130.1 & 130.0, 129.9, 128.6,
128.3, 127.2, 114.2, 113.4, 110.3, 96.4 and 96.2, 69.6 & 69.5, 53.9,
1
3
(
t, J = 7.0 Hz, 12H), 1.22 (t, J = 7.0 Hz, 3H). C NMR (150 MHz, CDCl
3
)
+
δ = 169.4, 157.7, 155.7, 155.0, 152.9, 132.0, 130.5, 130.4, 130.3,
46.2 & 45.5, 43.0, 31.9 & 31.1, 29.4, 14.2, 12.7. ESI-MS [M] : m/z
4