C. Zhang et al.
CatalysisCommunications102(2017)35–39
Scheme 1. Carbonyl reductase catalyzed asymmetric re-
duction of γ- and δ-keto acids/esters into chiral hydroxy
acids/esters and lactones.
2. Experimental
cured product was purified by column chromatography eluting with
petroleum ether and ethyl acetate (10:1).
2.1. Materials
4-Oxodecanoic acid, methyl 4-oxodecanoate, ethyl 4-oxodecanoate,
5-oxodecanoic acid, methyl 5-oxodecanoate and ethyl 5-oxodecanoate
were obtained from Xiamen Bestally Biotechnology Co., Ltd. (Fujian,
China). Racemic γ-decalactone and δ-decalactone were purchased from
TCI (Shanghai, China). All other chemicals and reagents were obtained
commercially. E. coli DH5α and E. coli BL21 (DE3) were used as the
cloning and expression hosts, respectively. Plasmid pET-28a (+) was
used for heterogeneous expression.
3. Results and discussion
3.1. Cloning and expression of carbonyl reductase
Previously, we discovered a carbonyl reductase (CpAR2) that can
efficiently reduce the ε-carbonyl group in ethyl 8-chloro-6-ox-
ooctanoate [28]. This enzyme was initially tested to transform 4-ox-
odecanoic acid, but the product was confirmed to be (S)-4-hydro-
xydecanoic acid, which was not the desired enantiomer. Because no
similar enzymes have been reported, we decided to search for new
carbonyl reductases from microbes. Thousands of single bacterial co-
lonies from environmental soil samples were screened, resulting in a
bacterial strain, Pseudomonas panipatensis, which could convert 4-ox-
odecanoic acid into (R)-4-hydroxydecanoic acid with 97% ee. A novel
carbonyl reductase was cloned from Pseudomonas panipatensis, desig-
nated as PpCR, and expressed by E. coli BL21. PpCR displayed a specific
activity of 1.44 U/g toward 4-oxodecanoic acid with 99% ee (Table 1,
entry 1).
To discover more enzymes, the gene sequence of PpCR was used as
the template to perform pBLAST searching in UniProt. On the basis of
the results, we selected 16 bacterial strains stored in our lab and cloned
the corresponding carbonyl reductases (SI, Table S1) that consist of a
toolbox of 20 recombinant enzymes expressed in E. coli BL21 (DE3).
These carbonyl reductases have moderate sequence identities (40–70%)
compared with the template enzyme. Of them, nine reductases ex-
hibited excellent stereoselectivity (> 99% ee) and various activities
(from 0.196 to 3.32 U/g protein), as shown in the asymmetric reduction
of 4-oxodecanoic acid (Table 1). SmCR (from Serratia marcescens),
which displayed the highest activity of 3.32 U/g and had a 47% amino
acid identity to PpCR, was chosen for further studies.
2.2. Cloning and expression of carbonyl reductase in E. coli
The genes of carbonyl reductases were amplified by PCR using the
primers listed in Table S1 (see Supporting information). The amplified
DNA were then inserted into expression plasmid pET-28a (+). The
recombinant plasmids were then transformed into E. coli BL21 (DE3).
The cells were cultivated at 37 °C in 100 mL LB medium containing
50 mg/L Kanamycin. The expression of encoding genes were induced
by the addition of IPTG to a final concentration of 0.2 mM at OD600 of
0.6. After addition of IPTG, the cultures were grown at 16 °C for another
24 h.
2.3. Enzyme assays
The reductase activity was determined by monitoring the decrease
in the absorbance of NADPH at 340 nm. The assay was performed in a
96-well half-area plate. Each reaction contained a final concentration of
0.1 mM NADPH, 0.2 mM substrate, 100 mM sodium phosphate buffer
(pH 7.0) and an appropriate amount of enzyme. Absorbance reading
were taken every 2 min at 30 °C for 60 min using a PowerWave XS2
spectrophotometer (BioTek, USA). One unit of enzyme activity was
defined as the amount of enzyme that catalyzed the oxidation of 1 μmol
NADPH per minute under above conditions.
Table 1
Enzyme screening for the reduction of 1a.
2.4. Preparative procedures
Entry
Enzyme
Amino acid identity (%)
For cell-catalyzed reaction, the reaction mixture was composed of
0.2 mmol substrate, 1 mmol glucose, 0.05 mmol NADP+, 5 g wet cells
of E. coli/SmCR, 0.5 g lyophilized E. coli/BmGDH and 100 mL of sodium
phosphate buffer (100 mM, pH 6.0). For enzyme-catalyzed reaction,
substrate (25–75 mM), glucose (5 equivalents of substrate), 0.5 mM
NADP+, 150 mg/mL lyophilized cell-free extracts of E. coli/SmCR, and
10 mg/mL lyophilized E. coli/BmGDH were mixed in a 500 mL sodium
phosphate buffer (100 mM, pH 6.0). The reaction was performed at
30 °C and the pH was controlled at 6.0 with addition of 1.0 mol/L
NaOH solution. GC was used to monitor the reaction progress. After
16 h, the mixture was acidified to pH 2.0 with 20% H2SO4 and heated
at 90 °C for 2 h. The mixture was extracted with ethyl acetate, dried
over Na2SO4, filtered and concentrated under reduced pressure. The
1
2
3
4
5
6
7
8
9
PpCR
SmCR
LgCR
ArCR
CnCR
VpCR
AaCR
RpCR
CbCR
VbCR
100
47
51
56
63
56
56
65
63
66
1.44
3.32
2.76
2.67
> 99 (R)
> 99 (R)
> 99 (R)
> 99 (R)
> 99 (R)
> 99 (R)
> 99 (R)
> 99 (R)
> 99 (R)
> 99 (R)
1.53
0.838
0.658
0.490
0.451
0.196
10
a
Specific activity was determined spectrophotometrically in sodium phosphate buffer
(100 mM, pH 7.0) containing 2 mM substrate 1a, 0.1 mM NADPH, and a proper amount
of purified enzymes at 30 °C.
b
The ee values were determined by chiral GC analysis of the corresponding lactones.
36