T. Nagata et al. / Bioorg. Med. Chem. Lett. 18 (2008) 4587–4592
4591
Table 1
Acids 2a, 5a, and amide 2b were further evaluated for their oral
activity in rats. Their anti-fXa activities in rat plasma after oral
administration are shown in Table 2. Disappointingly, acids 2a,
5a, and amide 2b were all found to have less oral activity in rats
than compound (À)-1. Since these compounds were more meta-
bolically stable than (À)-1, we reasoned that the introduction of
polar functionalities might decrease the membrane permeability
in rats.
Starting from 3-cyclohexenecarboxylic acid, we developed the
regio- and stereoselective synthesis of 3,4-diaminocyclohexane-
carboxylic acid derivatives 2–5 and performed a biological evalua-
tion on them as factor Xa inhibitors. SAR for the anti-fXa study of
this series revealed that the position and stereochemistry of the
polar functional group was critical to the in vitro anti-fXa activity.
Among the compounds, acid 2a and amide 2b exhibited the most
potent anti-fXa activity. Furthermore, we also revealed that the
dimethylcarbamoyl group could have better functionality for po-
tent in vitro anticoagulant activity. In addition, acids 2a–5a and
amide 2b with low lipophilicity showed improved metabolic sta-
bility compared with compound (À)-1, as we expected. However,
these low lipophilic compounds also resulted in low oral activity
probably due to low permeability. Therefore, to obtain more potent
fXa inhibitors with improved oral bioavailability, we need to bal-
ance the lipophilicity for both metabolic stability and permeability.
Further modifications of these compounds will be reported in due
course.
Introduction of a carboxylic group or dimethylcarbamoyl group on the cyclohexane
ring
R1
R2
Cl
O
S
N
H
N
HN
N
N
H
O
Compound R1
R2
Anti-fXa PTCT2 in PTCT2 Remaining
IC50
human
in rat
ratec (%)
a
(nM)
plasmab plasma
(
lM)
ab
(
lM)
(À)-1
H
H
H
16
2.9
9.2
2.8
46
2a
7.5
2.8
0.9
100
COOH
2b
3a
3b
4a
CONMe2
H
5.1
1.8
63
97
36
98
H
H
110
>20
>20
>20
>20
>20
15
COOH
CONMe2 840
H
H
75
88
COOH
4b
5a
CONMe2
6.8
19
43
98
19
H
H
16
CONMe2 12
8
3.0
3.8
COOH
5b
1.2
References and notes
a
The method for measuring anti-fXa activity is described in Ref. 9.
Anticoagulant activities in human and rat plasma were evaluated by the con-
b
1. (a) Prager, N. A.; Abendschein, D. R.; McKenzie, C. R.; Eisenberg, P. R. Circulation
1995, 92, 962; (b) Kunitada, S.; Nagahara, T. Curr. Pharm. Des. 1996, 2, 531.
2. Nagata, T.; Yoshino, T.; Haginoya, N.; Yoshikawa, K.; Isobe, Y.; Furugoori, T.;
Kanno, H. Bioorg. Med. Chem. Lett. 2007, 17, 4683.
3. Synthsis of 1-hydroxy-3,4-diaminocyclohexane Witiak, D. T.; Rotella, D. P.;
Wei, Y.; Filppi, J. A.; Gallucci, J. C. J. Med. Chem. 1989, 32, 214.
centration required to double the prothrombin time (PTCT2). Themethod is described
in Ref. 10.
c
The remaining rate of the compounds after 5 min of incubation with human
liver microsomes.
4. Furst, A.; Plattner, P. A. Helv. Chim. Acta 1949, 32, 275.
5. (a) Grewe, R.; Heinke, A. Chem. Ber. 1956, 89, 1978; (b) Kato, M.; Kageyama, M.;
Tanaka, R.; Kuwahara, K.; Yoshikoshi, A. J. Org. Chem. 1975, 40, 1932; (c)
Bartlett, P. A.; McQuaid, L. A. J. Am. Chem. Soc. 1984, 106, 7854.
6. Configurations of compounds 18 and 19 were established by X-ray
crystallographic analysis of their N,N-dimethylamide derivatives 33 and 34,
respectively. Crystallographic data (excluding structure factors) have been
deposited with the Cambridge Crystallographic Data Centre as supplementary
publication Nos. CCDC 637942 (33) and 637941 (34). Copies of the data can be
obtained, free of charge, on application to CCDC, 12 Union Road, Cambridge CB2
1EZ, UK, (fax: +44-(0)1223-336033 or e-mail:deposit@ccdc.cam.ac.uk).
Table 2
Ex vivo anti-fXa activity
Compound
Anti-fXa IC50 (nM)
Anti-fXa activity (%) at 1 h
after oral administrationa
(À)-1
2a
2b
16
78
0
39
4
7.5
5.1
16
5a
a
The methods for measuring the ex vivo anti-fXa activity are described in Ref. 11.
O
N
O
N
Boc
Boc
carbamoyl analogues exhibited enhanced anticoagulant activity. In
particular, compound 5b showed sevenfold higher potency than
the corresponding acid 5a, suggesting that the dimethylcarbamoyl
group could have better functionality for potent anticoagulant
activity. In this series of compounds, 2b showed the most potent
N
N
H
H
N3
33
N3
34
7. (a) Qiu, J.; Silverman, R. B. J. Med. Chem. 2000, 43, 706; (b) Katagiri, N.;
Matsuhashi, Y.; Kokufuda, H.; Takebayashi, M.; Kaneko, C. A. Tetrahedron Lett.
1997, 38, 1961.
8. Bellucci, G.; Marioni, F.; Marsili, A. Tetrahedron 1972, 28, 3393.
9. In vitro Anti-fXa activity was measured by using a chromogenic substrate S-
2222 (Chromogenix, Inc.) and human fXa (Enzyme Research Laboratories).
activities (fXa IC50: 5.1 nM, PTCT2: 0.9 lM) and was threefold more
potent than compound (À)-1.
As expected, the introduction of a carboxylic group on the
cyclohexane ring significantly improved the metabolic stability.
Acids 2a–5a showed excellent remaining rate ranging from 98%
to 100%, whereas compound (À)-1 had a low remaining rate of
46%. This stability could be mainly attributed to decreased lipo-
philicity. In contrast, dimethylcarbamoyl analogues 2b–5b re-
sulted in low to modest metabolic stability, ranging from 19% to
63%. Interestingly, the position and stereochemistry of a dimethyl-
carbamoyl group on cyclohexane ring is likely to affect metabolic
stability to some extent. Among the dimethylcarbamoyl analogues,
only 2b showed an improvement in the metabolic stability com-
pared with (À)-1.
Aqueous DMSO (5% V/V; 10
0.0625 U/mL human fXa (10
l
L) or inhibitors in aqueous DMSO (10
lL) and
lL) were mixed with 0.1 M Tris–0.2 M NaCl–0.2%
BSA buffer (pH 7.4; 40
lL). A reaction was started by the addition of 0.75 M S-
2222 (40 L). After the mixture was stirred for 10 s at rt, the increase of optical
l
densities (OD/min) was measured at 405 nm. Anti-fXa activity (inhibition %)
was calculated as follows: Anti-fXa activity = 1 À [(OD/min) of sample/(OD/
min) of control]. The IC50 value was obtained by plotting the inhibitor
concentration against the anti-fXa activity.
10. Prothrombin time (PT) was measured with an Amelung KC-10A micro
coagulometer (MC Medical, Tokyo, Japan) as follows: first, 50
was mixed with 50 L of inhibitor or 4% DMSO/saline and incubated for 1 min
at 37 °C. Coagulation was started by the addition of 100 L of thromboplastin C
lL of plasma
l
l