3
Purification of the ethynyltryptophans was carried out on a
Biotage Isolera Four using reverse-phase SNAP C18 12 g
column cartridges. The purification was carried out using
water/methanol on the following gradient: 12 mL/min elution,
2% methanol/water for 1.15 min, 2ꢀ15% methanol/water for
1.15 min, 15% methanol/water for 5.15 min, 15ꢀ95%
methanol/water for 15 min, 95% methanol/water for 3.45 min.
The collection wavelength was set a 254 nm. Collection of the
peaks occurring from approx. 4.3 min to 12.0 min gave the
resulting ethynyltryptophans.
J(H,H)= 15.5, 7.1 Hz, CHAHB), 3.28 (1H, dd, J(H,H)= 15.3, 5.0
ACCEPTED MANUSCRIPT
Hz, CHAHB), 4.13 (1H, dd, J(H,H)= 7.2, 5.3 Hz, CH), 7.18 (1H,
s, ArH), 7.44 (1H, s, ArH), 7.57 (1H, s, ArH); 13C NMR (125
MHz, D2O) δ = 25.7 (CH2), 53.5 (CH), 106.3 (C), 113.0 (CH),
118.9 (CH), 122.4 (C), 124.7 (C), 126.3 (C), 127.1 (CH), 135.0
+
(C), 172.3 (CO); HRMS (ESI): m/z calcd for C11H11Cl2N2O2
[M+H]+: 273.0192; found: 273.0190.
The reaction was repeated three more times to give
L-5,6-
dichlorotryptophan 11 (68 mg, 12%), (30 mg, 5%) and (26 mg,
5%). Over four runs, this gave an average yield of 7%.
Freeze drying was carried out on a Scanvac CoolSafeTM freeze
dryer.
4.3. tert-Butyl 5-iodo-1H-indole-1-carboxylate
Dialysis tubing cellulose membrane (average flat width 33 mm)
was purchased from Sigma Aldrich. An approximately 20 cm
length of tubing was immersed in water prior to use. One end
was tied in a knot. The thawed cell lysate was inserted into the
tied tubing using a pipette. Excess air was removed from inside
the tubing and the other end was tied to give a cylinder of
membrane sealed at both ends. The off-cuts of the knots were
removed to give a tube length of approximately 5 cm for use in
the reaction.
Di-tert-butyl dicarbonate (3.4 mL, 14.8 mmol, 1.2 eq) was added
to a solution of 5-iodoindole (3 g, 12.3 mmol, 1.0 eq) and 4-
DMAP (0.3 g, 2.5 mmol, 0.2 eq) in DCM (100 mL) at r.t. under
nitrogen and stirred for 2.5 h. The solvent was removed in vacuo.
Purification by column chromatography using silica gel (1:19
ethyl acetate:hexane) gave tert-butyl 5-iodo-1H-indole-1-
1
carboxylate (4.2 g, 100%) as a white solid; H NMR (500 MHz,
CDCl3) δ = 1.68 (9H, s, CH3), 6.50 (1H, dd, J(H,H)= 3.7, 0.6 Hz,
ArH), 7.56 (1H, d, J(H,H)= 3.7Hz, ArH), 7.58 (1H, dd, J(H,H)=
8.7, 1.8 Hz, ArH), 7.90 (1H, d, J(H,H)= 1.8 Hz, ArH), 7.93 (1H,
bd, J(H,H)= 8.7 Hz, ArH); 13C NMR (125 MHz, CDCl3) δ = 28.3
(CH3), 84.3 (C), 86.8 (C), 106.4 (CH), 117.2 (CH), 126.8 (CH),
129.9 (CH), 132.8 (CH), 133.0 (C), 134.7 (C), 149.6 (CO).
4.1.
L-5,6-Difluorotryptophan 9
L-Serine 2 (0.262 g, 2.5 mmol, 1.25 eq) was dissolved in KH2PO4
reaction buffer (0.1 M, pH 7.8, 95 mL). A solution of 5,6-
difluoro-1H-indole 8 (0.306 g, 2.0 mmol, 1.0 eq) in methanol (5
mL) was added to the flask containing the reaction buffer with
vigorous stirring. Tryptophan synthase cell lysate was thawed in
a 37 °C water bath, then stored at 0 °C. The cell lysate (3 mL)
was stored in a cellulose dialysis bag and added to the reaction
flask. The biotransformation was carried out at 37 °C, shaking at
180 rpm for 2 days. The aqueous layer was collected and washed
with ethyl acetate (2 x 50 mL). The aqueous layer was
concentrated to half its volume, then purified on C18 silica. The
aqueous layer was loaded onto 30 g C18 silica, which was then
washed with 200 mL water before elution of the product in
methanol. The methanolic fractions were collected and the
solvent was removed in vacuo. The residue was dissolved in
4.4. 5-Ethynyl-1H-indole 12
Ethynyltrimethylsilane (2.6 mL, 18.5 mmol, 1.5 eq) was added to
a solution of bis(triphenylphosphine)palladium (II) dichloride
(216 mg, 0.3 mmol, 2.5 mol%), copper (I) iodide (117 mg, 0.6
mmol, 5 mol%) and tert-butyl 5-iodo-1H-indole-1-carboxylate
(4.22 g, 12.3 mmol, 1.0 eq) in triethylamine (100 mL) at r.t under
nitrogen and stirred for 18 h. The reaction mixture was filtered
through celite and the solvent was removed in vacuo. The residue
was dissolved in methanol (100 mL) and potassium carbonate
(3.4 g, 24.6 mmol, 2.0 eq) was added. The reaction was stirred at
r.t. for 4 h. The reaction mixture was diluted with water (200 mL)
and extracted with diethyl ether (2 x 200 mL). The combined
organic layers were dried over anhydrous sodium sulfate and the
solvent removed in vacuo. Purification by column
chromatography using silica gel (1:19 ethyl acetate:hexane) gave
5-ethynyl-1H-indole 12 (1.04 g, 60% over 2 steps) as a pale
water (50 mL) and lyophilised to give L-5,6-difluorotryptophan 8
(245 mg, 51%) as a white solid; [α]D -12.4° (c 0.51, MeOH); 1H
NMR (500 MHz, D2O) δ = 3.23 (1H, dd, J(H,H)= 15.5, 7.1 Hz,
CHAHB), 3.28 (1H, dd, J(H,H)= 15.5, 5.4 Hz, CHAHB), 4.18 (1H,
dd, J(H,H)= 6.9, 5.5 Hz, CH), 7.19 (2H, overlapping m, ArH),
7.28 (1H, dd, J(H,F)= 11.2, 7.7 Hz, ArH); 13C NMR (125 MHz,
D2O) δ = 25.6 (CH2), 53.3 (CH), 99.5 (d, J(C,F)= 21.7 Hz, CH),
104.4 (d, J(C,F)= 19.5 Hz, CH), 106.6 (d, J(C,F)= 5.6 Hz, C),
121.7 (d, J(C,F)= 8.1 Hz, C) 126.4 (d, J(C,F)= 3.5 Hz, CH),
131.2 (d, J(C,F)= 10.9 Hz, C), 145.8, (dd, J(C,F)= 198.6, 15.0
Hz, CF), 147.6 (dd, J(C,F)= 200.0, 15.3 Hz, C), 172.0 (CO);
19F{1H} NMR (470 MHz, D2O) δ = -148.4 (d, J(F,F) = 21.1 Hz),
-144.9 (d, J(F,F) - 21.1 Hz); HRMS (ESI): m/z calcd for
C11H11F2N2O2+ [M+H]+: 241.0783; found 241.0782.
1
brown oil; H NMR (500 MHz, CDCl3) δ = 3.01 (1H, s, CH),
6.56 (1H, dd, J(H,H)= 3.2, 2.0 Hz, ArH), 7.25 (1H, dd, J(H,H)=
3.2, 2.4 Hz, ArH), 7.34-7.35 (2H, m, ArH), 7.84-7.85 (1H, m,
ArH), 8.24 (1H, bs, NH); 13C NMR (125 MHz, CDCl3) δ = 74.8
(CH), 85.5 (C), 103.1 (CH), 111.3 (CH), 113.4 (C), 125.4 (CH),
125.5 (CH), 126.2 (CH), 127.8 (C), 135.8 (C); HRMS (EI): m/z
calcd for C10H7N1+• [M]+•: 141.0578; found: 141.0583.
4.5.
L-5-Ethynyltryptophan 13
The reaction was repeated two more times to give
difluorotryptophan 9 (307 mg, 55%) and (233 mg, 49%). Over
three runs, this gave an average yield of 52%.
L-5,6-
L
-Serine 2 (0.262 g, 2.5 mmol, 1.25 eq) was dissolved in KH2PO4
reaction buffer (0.1 M, pH 7.8, 95 mL). A solution of 5-ethynyl-
1H-indole 12 (0.282 g, 2.0 mmol, 1.0 eq) in acetonitrile (5 mL)
was added to the flask containing the reaction buffer with
vigorous stirring. Tryptophan synthase cell lysate was thawed in
a 37 °C water bath, then stored at 0 °C. The cell lysate (3 mL)
was stored in a cellulose dialysis bag and added to the reaction
flask. The biotransformation was carried out at 37 °C, shaking at
180 rpm for 2 days. The aqueous layer was collected and washed
with ethyl acetate (2 x 50 mL). The aqueous layer was
4.2. L-5,6-Dichlorotryptophan 11
Using the biotransformation procedure reported above for 9, 5,6-
dichloro-1H-indole 10 (0.372 g, 2.0 mmol, 1.0 eq) gave 5,6-
dichlorotryptophan 11 (33 mg, 6%) as a white solid; [α]D -14.7°
(c 0.53, MeOH); 1H NMR (500 MHz, D2O) δ = 3.21 (1H, dd,