ChemBioChem
10.1002/cbic.201800133
FULL PAPER
1
second messengers - such as cADPR, NAADP and ADPR -
probably correspond to positively-charged or electron-poor
residues in their binding counterpart, an interaction often
presumed to be critical for their activity. These findings proved
that the cADPR mimics with the neutral modification to
pyrophosphate keep most of the same targets as cADPR and
cIDPRE in regulating the Ca2+ pathway. These findings provided
a new perspective for understanding the cADPR signaling
Synthesis
of
N -cyclic-ethoxylmethyl-inosine-5’-deoxy-5’-(4’”-
methyl-1’”,2’”,3’”-triazole)-2’,3’-O-isopropylidene ribose (3): To 12 (95
mg, 0.21 mmol) in THF (95 mL) was added DIPEA (79 μL, 0.460mmol).
The solution was degassed with argon (30 min), CuI (52.5 mg, 0.315
mmol) added and then stirred at 65C for 24 h. All solvents were
evaporated, and the residue was purified by silica gel column
chromatography eluting with PE: acetone (5:1 v/v) to afford compound 3
[20]
1
3
in 21% (20 mg)as a while amorphous solid. H NMR (400 MHz, CDCl ): δ
7.89 (s, 1H), 7.79 (s, 1H), 7.20 (s, 1H), 6.11 (s, 1H), 5.93 (s, 1H), 5.23 (s,
1H), 5.09 (s, 1H), 4.97 (s, 1H), 4.88 (s, 1H), 4.55 (s, 2H), 4.39 (s, 2H), 3.94
(s, 1H), 3.73 (s, 1H), 3.64 (s, 1H), 3.53 (s, 1H), 1.65 (s, 3H), 1.37 (s, 3H);
13C NMR (101 MHz, CDCl
25.2, 115.2, 88.8, 83.5, 83.0, 78.2, 74.8, 69.7, 69.3, 64.7, 48.9, 27.3, 25.7.
pathway. Considering the cell selectivity of cADPR mimics in
mobilizing calcium signaling,[27] the biological behaviors of these
neutral mimics in other cell systems are underway.
3
): δ 156.9, 148.6, 146.2, 144.3, 139.4, 129.5,
1
+
24 7 6
HRMS (m/z): [(M+H)] calcd for C19H N O , 446.1788; found, 446.1791.
Experimental Section
3
Synthesis of N -[(2”-propynyl)ethoxylethyl]-5’-azido-5’-deoxy-2’,3’-O-
isopropylidene uridine (17): 15[15] (111 mg, 0.544 mmol) was added
2
Agents and materials: NPE-cADPR[28], cIDPRE[29] and 8-Br-cADPR[30]
were synthesized as detailed previously. Other chemicals purchased from
Beijing J&K Chemical Ltd. and Shanghai Sigma Trading Co Ltd.. All
anhydrous reagents and solvents were obtained by dehydration according
dropwise to the solution of 14 (140mg, 0.454 mmol) and anhydrous K CO3
(141 mg, 1.02 mmol) in DMF (6 mL) and acetone (6 mL), and the resulting
mixture was refluxed at 55C for 4 h. The mixture was evaporated to
dryness, and the residue was applied to
chromatography eluting with PE: acetone (8:1 v/v) to yield 17 in 58% (114
mg) as a pale yellow oil. H NMR (400 MHz, CDCl ): δ 7.23 (d, J = 8.1 Hz,
1H), 5.76 (d, J = 8.1 Hz, 1H), 5.63 (d, J = 1.6 Hz, 1H), 4.97 (dd, J = 6.3,
1.6 Hz, 1H), 4.80 (dd, J = 6.3, 4.2 Hz, 1H), 4.23 (dd, J = 9.4, 4.9 Hz, 1H),
4.15 (dd, J = 10.7, 4.1 Hz, 4H), 3.71 (t, J = 5.9 Hz, 2H), 3.65 (s, 4H), 3.60
a silica gel column
2
to the standard methods before use. DCM was distilled from CaH . THF
was freshly distilled from sodium. Other reagents and solvents were
obtained locally and of analytical grade. Recombinant soluble mouse
CD38 and ADP-ribosyl cyclase from Aplysia californica were supplied by
Zhao, Y. J. (Shenzhen Graduate School of Peking University, China).
1
3
(
d, J = 5.2 Hz, 2H), 2.41 (t, J = 2.3 Hz, 1H), 1.55 (s, 3H), 1.34 (s, 3H); 13
NMR (101 MHz, CDCl ): δ 162.3, 150.5, 140.3, 114.8, 102.4, 95.6, 85.8,
84.4, 81.2, 79.6, 74.4, 69.8, 69.1, 67.6, 58.3, 52.2, 39.7, 27.1, 25.4.
C
Synthesis of 3-[2-(methoxymethoxy)ethoxy]-1-propyne (7): To the
solution of 6[12] (2 g, 20 mmol) and dimethoxymethane (4 mL, 45 mmol) in
3
2 5
DCM (4 mL) was added P O (1 g, 7 mmol) at 0C. After 24 h, DCM and
NaHCO
3
(sat. aq.) were added, and the organic layer dried with anhydrous
Synthesis of N -cyclic-ethoxylethyl-uridine-5’-deoxy-5’-(4’”-methyl-
3
Na SO
2
4
and evaporated. Then the residue was applied to a column of
1’”,2’”,3’”-triazole)-2’,3’-O-isopropylidene ribose (4): To 17 (170 mg,
0.391mmol) in THF (170 mL) was added DIPEA (150 μL, 0.870mmol). The
solution was degassed with argon (30 min), CuI (100 mg, 0.591 mmol)
added and then stirred at 65C for 24 h. All solvents were evaporated, and
the residue was purified by silica gel column chromatography eluting with
silica gel with PE: EtOAc (8:1 v/v) to yield 7 in 69% (1.98 g) as a colourless
oil. 1H NMR (400 MHz, CDCl
): δ 4.59 (s, 2H), 4.15 (d, J = 2.4 Hz, 2H),
.64 (s, 4H), 3.30 (s, 3H), 2.40 (t, J = 2.4 Hz, 1H); 13C NMR (101 MHz,
3
3
3
CDCl ): δ 96.5, 79.5, 74.6, 68.9, 66.5, 58.3, 55.1.
PE: acetone (5:1 v/v) to afford compound 4 in 16% (27 mg) as a while
1
Synthesis of 3-[2-(acetoxymethoxy)ethoxy]-1-propyne (8): To 7 (670
mg, 4.65 mmol) in acetic anhydride (1.1mL) was added boron
trifluoride−diethyl etherate (0.30 mL) at 0C, then the solution was stirred
amorphous solid. H NMR (400 MHz, CDCl
3
): δ 7.71 (s, 1H), 7.09 (d, J =
8.0 Hz, 1H), 5.75 (d, J = 8.0 Hz, 1H), 5.32 (dd, J = 6.3, 3.0 Hz, 1H), 5.24
(d, J = 3.0 Hz, 1H), 4.97 (dd, J = 14.3, 11.3 Hz, 1H), 4.85 – 4.73 (m, 2H),
4.76 – 4.56 (m, 4H), 3.92 – 3.89 (m, 2H), 3.72 – 3.51 (m, 5H), 1.56 (s, 3H),
for 2 h. The reaction mixture was diluted with DCM, washed with NaHCO
3
1.37 (s, 3H); 13C NMR (101 MHz, CDCl
(
sat. aq.) and dried with anhydrous Na SO . After evaporation the residue
2
4
3
) δ 162.5, 150.7, 146.2, 142.6,
was applied to a column of silica gel with PE: EtOAc (7:1 v/v) to yield 8 in
124.5, 114.5, 102.3, 101.8, 84.2, 82.6, 82.2, 71.3, 69.4, 67.8, 65.0, 50.7,
1
+
3
4
3
2
8% (2.76 g) as a colourless oil. H NMR (400 MHz, CDCl
.16 (s, 2H), 3.79-3.77 (m, 2H), 3.67-3.65 (s, 2H), 2.43 (s, 1H), 2.05 (s,
3
): δ 5.26 (s, 2H),
26 5 7
40.9, 27.2, 25.1. HRMS (m/z): [(M+H)] calcd for C19H N O , 436.1832;
found, 436.1835.
H);13C NMR (101 MHz, CDCl
0.9.
3
): δ 170.5, 89.2, 79.4, 74.7, 69.3, 68.7, 58.4,
3
Synthesis of N
isopropylidene uridine (18): 16 (109 mg, 0.54 mmol) was added
dropwise to the solution of 14 (140mg, 0.45 mmol) and anhydrous K CO
-[(2”-propynyl) pentyloxy]-5’-azido-5’-deoxy-2’,3’-O-
1
Synthesis of N -[(2”-propynyl) ethoxylmethyl]-5’-azido-5’-deoxy-2’,3’-
O-isopropylidene inosine (12): To 8 (145 mg, 0.841 mmol) in DCM (2mL)
was added TMSBr (0.25 mL) at 0C, then the solution was refluxed for 18
h. The residue was concentrated under reduced pressure to afford 3-[2-
2
3
(141 mg, 1.02 mmol) in DMF (6 mL) and acetone (6 mL), and the resulting
mixture was refluxed at 55C for 4 h. The mixture was evaporated to
dryness, and the residue was applied to silica gel column chromatography
(
Bromomethoxy)ethoxy]-1-propyne (9). Subsequently, 9 (140 mg, 0.730
mmol) was added to the solution of 11[14] (60 mg, 0.180 mmol) and DBU
0.2 mL, 1.51 mmol) in DCM (2 mL) at 0C. After being stirred for 4 h, the
eluting with PE: acetone (8:1 v/v) to yield 18 in 60% (117 mg) as a yellow
1
oil. H NMR (400 MHz, CDCl
3
): δ 7.21 (d, J = 8.0 Hz, 1H), 5.74 (d, J = 8.0
(
Hz, 1H) 5.61 (s, 1H), 4.95 (d, J = 6.4 Hz, 1H), 4.77 – 4.75 (m, 1H), 4.21 (d,
J = 4.4 Hz, 1H), 4.09 (s, 2H), 3.86 (t, J = 7.4 Hz, 2H), 3.58 (d, J = 4.9 Hz,
2H), 3.48 (t, J = 6.4 Hz, 2H), 2.39 (s, 1H), 1.59 (dd, J = 14.7, 7.1 Hz, 4H), ,
1.53 (s, 3H), 1.39 (dd, J = 14.7, 7.7 Hz, 2H), 1.32 (s, 3H); 13C NMR (101
solvent was evaporated and the residue was purified by silica gel column
chromatography with PE: acetone (5:1 v/v) to afford compound 12 in 68%
(
1
54 mg). H NMR (400 MHz, CDCl
3
): δ 8.13 (s, 1H), 7.91 (s, 1H), 6.05 (d,
J = 2.7 Hz, 1H), 5.55 (s, 2H), 5.24 (dd, J = 6.4, 2.7 Hz, 1H), 4.94 (dd, J =
.4, 3.4 Hz, 1H), 4.36 – 4.32 (m, 1H), 4.14 (d, J = 2.4 Hz, 2H), 3.86 – 3.81
m, 2H), 3.66 (dd, J = 5.4, 3.4 Hz, 2H), 3.58 (dd, J = 8.3, 5.4 Hz, 2H), 2.40
s, 1H), 1.60 (s, 3H), 1.37 (s, 3H); 13C NMR (101 MHz, CDCl
): δ 156.6,
47.9, 147.0, 139.0, 125.1, 115.1, 90.2, 84.9, 84.3, 81.6, 79.0, 75.0, 74.6,
9.3, 68.6, 58.1, 52.1, 27.4, 25.4.
3
MHz, CDCl ): δ 162.5, 150.6, 139.9, 114.6, 102.4, 95.8, 85.6, 84.4, 81.7,
80.0, 74.1, 69.9, 57.8, 52.3, 41.1, 29.1, 27.3, 27.1, 25.3, 23.5.
6
(
(
1
6
3
3
Synthesis of N -cyclic-pentyloxyl-uridine-5’-deoxy-5’-(4’”-methyl-
1’”,2’”,3’”-triazole)-2’,3’-O-isopropylidene ribose (5): To 18 (173 mg,
0.40 mmol) in THF (173 mL) was added DIPEA (150 μL, 0.87 mmol). The
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