F. Carta et al. / Bioorg. Med. Chem. Lett. 22 (2012) 267–270
269
hydrolyzed to the trans-2-hydroxycinnamic acid 10a,3 by the CA
esterase activity. Thus, lactone 1 has been hydrolyzed to the corre-
sponding hydroxyl acid 1a (Scheme 1) which has been isolated,
purified and assayed as a CA I (Table 1). Data of Table 1 show that
lactone 1 and hydroxyl acid 1a have basically the same CA inhibi-
tory activity against the three investigated isoforms (within the
limits of the experimental errors of the assay method), which is ex-
actly the situation observed for the coumarin 10 and its opened
form, trans-2-hydroxycinnamic acid 10a. We are thus confident
that (thio)lactones possess a CA inhibition mechanism similar to
that of coumarins, that is, they act as prodrugs, being hydrolyzed
by the esterase activity of these enzymes, with formation of hydro-
xy/keto/mercapto acids which thereafter act as inhibitors. We are
however not sure whether these compounds bind in the same ac-
tive site region as the hydrolyzed coumarins, or whether they coor-
dinate to the Zn(II) ion of the enzyme. In fact both situations are
plausible, since the antiepileptic lacosamide 11 (an aliphatic com-
pound) was found bound at the entrance of the hCA II active site, in
the coumarin binding region,15 but some carboxylates, such as ace-
tate, were found coordinated to the Zn(II) ion in the X-ray crystal
24, 1; (b) Dubois, L.; Lieuwes, N. G.; Maresca, A.; Thiry, A.; Supuran, C. T.;
Scozzafava, A.; Wouters, B. G.; Lambin, P. Radiother. Oncol. 2009, 92, 423; (c)
Ahlskog, J. K. J.; Dumelin, C. E.; Trüssel, S.; Marlind, J.; Neri, D. Bioorg. Med.
Chem. Lett. 2009, 19, 4851; (d) Ahlskog, J. K.; Schliemann, C.; Mårlind, J.;
Qureshi, U.; Ammar, A.; Pedleym, R. B.; Neri, D. Br. J. Cancer 2009, 101, 645.
Carta, F.; Temperini, C.; Innocenti, A.; Scozzafava, A.; Kaila, K.; Supuran, C. T. J.
Med.Chem. 2010, 53, 5511.
6
.
.
7
Alterio, V.; Di Fiore, A.; D’Ambrosio, K.; Supuran, C. T.; De Simone, G. X-Ray
Crystallography of CA Inhibitors and its Importance in Drug Design. In Drug
Design of Zinc-Enzyme Inhibitors: Functional, Structural and Disease Applications;
Supuran, C. T., Winum, J. Y., Eds.; Wiley: Hoboken, 2009; pp 73–138.
(a) Švastová, E.; Hulıkova, A.; Rafajová, M.; Zat’ovi cˇ ová, M.; Gibadulinova, A.;
Casini, A.; Cecchi, A.; Scozzafava, A.; Supuran, C.; Pastorek, J. FEBS Lett. 2004,
´
8
.
5
77, 439; (b) Swietach, P.; Wigfield, S.; Cobden, P.; Supuran, C. T.; Harris, A. L.;
Vaughan-Jones, R. D. J. Biol. Chem. 2008, 283, 20473; (c) Pacchiano, F.; Carta, F.;
McDonald, P. C.; Lou, Y.; Vullo, D.; Scozzafava, A.; Dedhar, S.; Supuran, C. T. J.
Med. Chem. 2011, 54, 1896.
Maresca, A.; Supuran, C. T. Bioorg. Med. Chem. Lett. 2010, 20, 4511.
0. Maresca, A.; Scozzafava, A.; Supuran, C. T. Bioorg. Med. Chem. Lett. 2010, 20,
9.
1
7255.
11. Lou, Y.; McDonald, P. C.; Oloumi, A.; Chia, S. K.; Ostlund, C.; Ahmadi, A.; Kyle,
A.; Auf dem Keller, U.; Leung, S.; Huntsman, D. G.; Clarke, B.; Sutherland, B. W.;
Waterhouse, D.; Bally, M. B.; Roskelley, C. D.; Overall, C. M.; Minchinton, A.;
Pacchiano, F.; Carta, F.; Scozzafava, A.; Touisni, N.; Winum, J. Y.; Supuran, C. T.;
Dedhar, S. Cancer Res. 2011, 71, 3364.
12. Alterio, V.; Hilvo, M.; Di Fiore, A.; Supuran, C. T.; Pan, P.; Parkkila, S.; Scaloni, A.;
Pastorek, J.; Pastorekova, S.; Pedone, C.; Scozzafava, A.; Monti, S. M.; De
Simone, G. Proc. Natl. Acad. Sci. U.S.A. 2009, 106, 16233.
16
structures of some isoforms, such as CA XIII. Further studies are
necessary thus to decipher the detailed inhibition mechanism of
CAs with (thio)lactones.1
1
3. Neri, D.; Supuran, C. T. Nat. Rev. Drug Disc. 2011, 10, 767.
14. Khalifah, R.G. J. Biol. Chem. 1971, 246, 2561. An applied photophysics stopped-
flow instrument has been used for assaying the CA catalysed CO hydration
7,18
2
activity. Phenol red (at a concentration of 0.2 mM) has been used as indicator,
working at the absorbance maximum of 557 nm, with 20 mM Hepes (pH 7.5)
R
O
R
O
as buffer, and 20 mM Na
following the initial rates of the CA-catalyzed CO
period of 10–100 s. The CO concentrations ranged from 1.7 to 17 mM for the
2
SO
4
(for maintaining constant the ionic strength),
2
hydration reaction for a
Lawesson's Reagent
Toluene
R=R1= H; 8
2
R=R = Me; 9
determination of the kinetic parameters and inhibition constants. For each
inhibitor at least six traces of the initial 5–10% of the reaction have been used
for determining the initial velocity. The uncatalyzed rates were determined in
the same manner and subtracted from the total observed rates. Stock solutions
of inhibitor (0.1 mM) were prepared in distilled-deionized water with 1–2%
DMSO, and dilutions up to 1 nM were done thereafter with distilled-deionized
water. Inhibitor and enzyme solutions were preincubated together for 15 min–
1
R1
S
R1
O
OMe
O
7
2 h at room temperature (15 min) or 4 °C (all other incubation times) prior to
H
N
assay, in order to allow for the formation of the E-I complex or for the eventual
active site mediated hydrolysis of the inhibitor. Data reported in Table 1 show
the inhibition after 6 h incubation, which led to the completion of the in situ
hydrolysis of the (thio)lactone/coumarin and formation of the hydrolysis
products.3 The inhibition constants were obtained by non-linear least-squares
methods using PRISM 3, as reported earlier,3 and represent the mean from at
least three different determinations. CA isoforms were recombinant ones
obtained in house as reported earlier.3
N
H
O
1
1: lacosamide
b,4
b,4
1
1
1
5. Temperini, C.; Innocenti, A.; Scozzafava, A.; Parkkila, S.; Supuran, C. T. J. Med.
In conclusion, we report here a new class of mechanism-based
Chem. 2010, 53, 850.
CA I, the (thio)lactones, which similar to the coumarins are hydro-
lyzed by the CA esterase activity, and the formed products than act
as low micromolar inhibitors of some isoforms, but not of CA II, an
off-target isozyme. Considering that the tumor-associated CA IX
was the mostly inhibited isoform by this new class of CAIs, and that
this is a recently validated antitumor target, this discovery brings
interesting prospects for designing CA IX-selective agents belong-
ing to novel chemotypes.
6. Di Fiore, A.; Monti, S. M.; Hilvo, M.; Parkkila, S.; Romano, V.; Scaloni, A.;
Pedone, C.; Scozzafava, A.; Supuran, C. T.; De Simone, G. Proteins 2009, 74, 164.
7. Lactones 1–7 were commercially available (Sigma–Aldrich, Milan, Italy)
whereas the thiolactones 8 and 9 were prepared from the corresponding
lactones 2 and 3 by thionylation with Lawesson’s reagent. Nuclear magnetic
1
13
( H, C) spectra were determined in D O or DMSO and were recorded using a
2
Bruker Advance III 400 MHz instrument. The chemical shifts (d scale) are
reported in parts per million (ppm) and the coupling constants (J) are
expressed in hertz (Hz). Splitting patterns are designated as follows: m,
multiplet. Thin layer chromatography (TLC) was carried out on Merck Silica Gel
6
0 F254 aluminum backed plates. Elution of the plates was carried out using
ethyl acetate/n-hexane systems. Visualization was achieved with UV light at
54 nm, by dipping into a 0.5% aqueous potassium permanganate solution, by
Acknowledgment
2
Hanessian’s stain solution and heating with a hot air gun or by exposure to
iodine. 5,6-Dihydropyran-2-one for synthesis is commercially available from
Sigma–Aldrich (Milan, Italy), and was used without further purification. All
other solvents and chemicals were used as supplied from Aldrich Chemical Co.,
Acros, Fisher, Alfa Aesar or Lancaster Synthesis. All CA isozymes were
recombinant ones produced and purified in our laboratory as described
This research was financed by an FP7 EU project (Metoxia).
References and notes
4,8–10
1.
2.
3.
(a) Supuran, C. T. Nat. Rev. Drug Disc. 2008, 7, 168; (b) Supuran, C. T. Bioorg. Med.
Chem. Lett. 2010, 20, 3467.
(a) Supuran, C. T.; Scozzafava, A.; Casini, A. Med. Res. Rev. 2003, 23, 146; (b)
Supuran, C. T. Curr. Pharm. Des. 2010, 16, 3233.
(a) Vu, H.; Pham, N. B.; Quinn, R. J. J. Biomol. Screen. 2008, 13, 265; (b) Maresca,
A.; Temperini, C.; Vu, H.; Pham, N. B.; Poulsen, S. A.; Scozzafava, A.; Quinn, R. J.;
Supuran, C. T. J. Am. Chem. Soc. 2009, 131, 3057.
earlier.
Synthesis of potassium (E)-5-hydroxypent-2-enoate 1a.18
5,6-Dihydropyran-2-one 1 (0.2 g, 2.1 mmol) was dissolved in 2 mL of water.
Potassium hydroxide (0.056 g, 2.6 mmol) was added and the reaction mixture
was left stirring at room temperature until complete (TLC monitoring). The
solvent was then removed in vacuo to obtain a light brown hygroscopic solid in
80% yield. Silica gel TLC R
O) 2.40 (3H, m, 4-H ), 3.71 (2H, t J 6.4, 5-H
6.58 (1H, dt J 15.6, 6.8, 3-H); d (100 MHz, D O) 176.2, 141.9, 129.1, 60.9, 34.9.
Synthesis of 2H-pyran-2-thione 8 and 4,6-dimethyl-2H-pyran-2-thione 9.
2H-Pyran-2-one or 4,6-dimethyl- -pyrone (0.1 g, 1.0 eq) was dissolved in dry
f
0.01 (Ethyl acetate /n-hex 50%, v/v); d
H
(400 MHz,
4
.
.
Maresca, A.; Temperini, C.; Pochet, L.; Masereel, B.; Scozzafava, A.; Supuran, C.
T. J. Med. Chem. 2010, 53, 335.
(a) Ebbesen, P.; Pettersen, E. O.; Gorr, T. A.; Jobst, G.; Williams, K.; Kienninger,
J.; Wenger, R. H.; Pastorekova, S.; Dubois, L.; Lambin, P.; Wouters, B. G.;
Supuran, C. T.; Poellinger, L.; Ratcliffe, P.; Kanopka, A.; Görlach, A.; Gasmann,
M.; Harris, A. L.; Maxwell, P.; Scozzafava, A. J. Enzyme Inhib. Med. Chem. 2009,
D
2
2
2
), 5.89 (1H, dt J 15.6, 1.6, 2-H),
c
2
19
5
a
toluene (3.0 ml) and Lawesson’s reagent (1.5 eq) was added. The mixture was
stirred at 80 °C under a nitrogen atmosphere until starting material was