K. Smiataczowa, K. Maj, P. Skurski
FULL PAPER
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Calculations: The semi-empirical PM3 method,[11] as implemented
in a MOPAC-93 molecular orbital package,[18] was used to elucid-
ate the mechanism of the hydrogen chloride-catalyzed mutarotation
reaction of N-(p-chlorophenyl)-β--glucopyranosylamine. Owing
to the complex nature of the systems under study (they consist of
19 heavy atoms), ab initio or DFT calculations would have been
difficult to complete in a reasonable time. In view of this, a PM3
method was chosen, as it allows a reasonable prediction of the
heats of formation, geometries, dipole moments, and other physico-
chemical parameters characterizing a given system.[19] After prelim-
inary optimization of geometries by the molecular mechanics in-
corporated into the SPARTAN 4.0 program package,[20] the geo-
metries of all the systems were fully optimized following the EF
procedure.[21] Final energy gradients were invariably below 0.1
kcal·molϪ1, whereas eigenvalues of the Hessian matrix were all pos-
itive, thus confirming the stationary points on the potential energy
hypersurface corresponding to the energy minima. As far as the
procedure for seeking out the saddle points of the transformations
is concerned, the ‘‘saddle procedure’’ was first adopted to generate
rough structures.[22,23] These were subsequently refined using the
EF procedure.[21] Finally, the frequencies of the harmonic vibra-
tions characterizing the resulting molecules were calculated in order
to demonstrate that for all saddle points there is one and only one
imaginary harmonic frequency.
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The thermodynamic parameters (entropy, thermal energy contribu-
tions) were calculated by applying the methods of statistical ther-
modynamics.[24] The heats of formation (∆Hof ) and entropies (S°)
were then used to calculate the enthalpies (∆Hor ), entropies, and
free energies (∆Gor ) of reactions at 298.15 K under a standard pres-
sure of 1 atmosphere.[25]
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All calculations were carried out using an IBM RS/6000 3CT
workstation.
[21]
[22]
[23]
Acknowledgments
This research was supported by the Polish State Committee for
[24]
[25]
Scientific Research under grant BW/8000-5-0306Ϫ9.
Received November 2, 2000
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[O00554]
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