Heteroaryl Sulfonamides and Sulfonyl Fluorides
TABLE 2. Results of Conversion of Heteroaryl Thiols to Heteroaryl Sulfonyl Fluorides
entry
starting thiol
product
yield,a %
mp, °C
1
2
3
4
5
6
2-mercaptopyrimidine (2a)
8a
8b
8e
8f
8k
8o
73
79
42
70
49
73
58-60b
57-58c
95-96
25-28d
76-77
55-57e
4,6-dimethyl-2-mercaptopyrimidine (2b)
2-mercaptobenzothiazole (2e)
2-mercaptopyridine (2f)
2-mercaptoquinoline (2k)
3-mercapto-6-methoxypyridazine (2o)
a Unoptimized yield of analytically pure isolated product. b Literature mp 57 °C (see ref 13). c Literature mp 58 °C (see ref 13). d Product purified by
Kugelrohr distillation (oven temperature 125 °C, pressure 2 Torr). e See ref 16c.
hypochlorite solution was added by pipet and the liberated iodine
was titrated with 0.100 N standardized sodium thiosulfate solution,
adding a few milliliters of starch solution as the endpoint was
approached. Each milliliter of 0.100 N sodium thiosulfate required
is equivalent to 3.722 mg of NaOCl.
decomposed upon attempted chromatography on silica or
alumina. Distillation proved successful for sufficiently low
molecular weight compounds (8f). Recrystallization from etha-
nol or 2-propanol afforded analytically pure samples of crystal-
line products, but the relatively high solubility of the products
in these solvents resulted in low recovery of the products.
In summary, we have developed a general method for the
preparation of heteroaryl sulfonamides from the readily available
heteroaryl thiols by oxidation at lower temperatures than
previously employed and immediate trapping of the unstable
intermediate heteroaryl sulfonyl chloride with the desired amine.
The reaction uses readily available reagents, allows easy control
of stoichiometry, and avoids the use of chlorine gas. The reaction
conditions may be modified to afford the heteroaryl sulfonyl
fluorides, which are stable enough to isolate and store, yet
reactive enough toward amines to afford the corresponding
heteroaryl sulfonamides. These features make the heteroaryl
sulfonyl fluorides potentially useful fragments to consider in a
parallel medicinal chemistry effort. We hope that these proce-
dures may be of value to others seeking novel synthetic
fragments with unique properties for medicinal chemistry
programs.
Procedure A: Preparation of Heteroaryl Sulfonamides at
-10 to -5 °C. N-Benzyl Pyrimidine-2-sulfonamide (3a). 2-Mer-
captopyrimidine (2a, 0.561 g, 5 mmol) was stirred in a mixture of
25 mL of CH2Cl2 and 25 mL of 1 M HCl in a 125-mL Erlenmeyer
flask for 10 min at -10 to -5 °C (internal temperature). Cold (5
°C) sodium hypochlorite (6% solution, 0.68 M, 26 mL, 18 mmol,
3.3 equiv) was added dropwise with Very rapid stirring, maintaining
the internal temperature at -10 to -5 °C. The mixture was stirred
for 15 min at -10 to -5 °C (internal temperature) after the addition
was completed. The mixture was transferred to a separatory funnel
(pre-cooled with ice water) and the CH2Cl2 layer was rapidly
separated and collected in a clean 125-mL Erlenmeyer flask cooled
in a dry ice-acetone bath. Benzylamine (1.4 mL, 12.5 mmol) was
added with stirring, whereupon the CH2Cl2 layer became a white
suspension. The flask was removed to an ice-water bath and the
suspension was stirred for 30 min at 0 °C. The suspension was
then washed with 1 M phosphoric acid (all solids dissolved at once),
then with water and brine. Drying (Na2SO4) and concentration
afforded 1.171 g (94%) of 3a as a fine white powder, mp 117-
118 °C. 1H NMR (CDCl3) δ 8.87 (d, J ) 5 Hz, 2 H), 7.46 (t, J )
5 Hz, 1 H), 7.28 (m, 5 H), 5.14 (br t, 1 H), 4.41 (d, J ) 6 Hz, 2
H); 13C NMR (CDCl3) δ 158.7, 136.5, 129.0, 128.2, 123.3, 48.4.
APCI MS: m/z 250 (M + H)+. Anal. Calcd for C11H11N3O2S: C,
53.00; H, 4.45; N, 16.86. Found: C, 52.71; H, 4.40; N, 16.71.
Procedure B: Preparation of Heteroaryl Sulfonamides at
-30 to -25 °C. N-Benzyl 4,6-dimethylpyrimidine-2-sulfonamide
(3b): 4,6-Dimethyl-2-mercaptopyrimidine (2b, 0.701 g, 5 mmol)
was stirred in a mixture of 25 mL of CH2Cl2 and 25 mL of 1 M
HCl (25 wt % CaCl2) in a 125-mL Erlenmeyer flask for 10 min at
-30 to -25 °C (internal temperature, maintained by intermittent
cooling with a dry ice-acetone bath). Calcium chloride 6-hydrate
(19 g) was dissolved in sodium hypochlorite (6% solution, 0.74
M, 24 mL, 18 mmol, 3.3 equiv), and the resulting clear solution
was added dropwise with Very rapid stirring, maintaining the
internal temperature at -30 to -25 °C. The mixture was stirred
for 15 min at -30 to -25 °C (internal temperature) after the
addition was completed. The mixture was diluted with 25 mL of
ice water and transferred to a separatory funnel (pre-cooled with
ice water). The CH2Cl2 layer was rapidly separated and collected
in a clean 125-mL Erlenmeyer flask cooled in a dry ice-acetone
bath. Benzylamine (1.4 mL, 12.5 mmol) was added with stirring,
whereupon the CH2Cl2 layer became a white suspension. The flask
was removed to an ice-water bath and the suspension was stirred
for 30 min at 0 °C. The suspension was then washed with 1 M
phosphoric acid, then with water and brine. Drying (Na2SO4) and
Experimental Section
All oxidation reactions involving sodium hypochlorite were
carried with rapid continuous magnetic stirring in Erlenmeyer flasks
open to the atmosphere. Sodium hypochlorite was commercial
“ultra” laundry bleach containing a stated concentration of 6%
NaOCl. The actual concentration of hypochlorite was determined
by iodometric titration. Hydrochloric acid (ca. 1 M) containing 25
wt % of calcium chloride was prepared by dissolving 125 g of
anhydrous calcium chloride in 350 mL of water and cooling to
room temperature. Once the solution had cooled, 42 mL of
concentrated hydrochloric acid was added and the solution was
diluted to 500 mL with water. Methyl 2-mercaptonicotinate (2g)
and methyl 6-mercaptonicotinate (2n) were prepared by literature
procedures.15
Titration of Sodium Hypochlorite. Potassium iodide (2 g) and
3 mL of glacial HOAc were dissolved in 50 mL of H2O in an
Erlenmeyer flask. An accurately measured volume (3 mL) of
(14) Oxidation of 2a, 2b, and 2d with Cl2 in MeOH-H2O-KHF2 has
been reported to proceed in good yield; see ref 13. Oxidation of 2o under
similar conditions has been reported; see: Turck, A.; Ple, N.; Pollet, P.;
Queguiner, G. J. Heterocycl. Chem. 1998, 35, 429. These procedures use
chlorine gas in large excess as the oxidant. Presumably the use of
hypochlorite in stochiometeric amounts is unsatisfactory under the MeOH-
H2O conditions due to competing oxidation of MeOH by hypochlorite.
(15) Fibel, L. R.; Spoerri, P. E. J. Am. Chem. Soc. 1948, 70, 3908. Young,
R. N.; Gauthier, J. Y.; Coombs, W. Tetrahedron Lett. 1984, 25, 1753.
(16) (a) Clapp, J. W.; Roblin, R. O., Jr. U.S. Patent 2,577,231, 1951
(Chem. Abstr. 1952, 46, 32788). (b) Stanovnik, B.; Tisler, M. Arch. Pharm.
1965, 298, 357. (c) Mylari, B. L.; Armento, S. J.; Beebe, D. A.; Conn, E.
L.; Coutcher, J. B.; Dina, M. S.; O’Gorman, M. T.; Linhares, M. C.; Martin,
W. H.; Oates, P. J.; Tess, D. A.; Withbroe, G. J.; Zembrowski, W. J. J.
Med. Chem. 2003, 46, 2283.
1
concentration afforded 1.060 g of 3b as a fine white powder. H
NMR indicated the presence of about 5% of 2-chloro-4,6-dimeth-
ylpyrimidine. Recrystallization from 2-propanol gave 0.885 g (64%)
of 3b as white crystals, mp 129-130 °C. 1H NMR (CDCl3) δ 7.29-
7.20 (m, 5 H), 7.11 (s, 1 H), 5.24 (br t, 1 H), 4.37 (d, J ) 6 Hz, 2
H), 2.54 (s, 6 H); 13C NMR (CDCl3) δ 169.2, 165.3, 136.7, 128.8,
128.3, 128.2, 128.1, 122.4, 48.4, 24.1. APCI MS: m/z 278 (M +
J. Org. Chem, Vol. 71, No. 3, 2006 1083