Synthesis of 2′-Deoxy-4′-thia â-Anomeric Spirocyclic Nucleosides
(m, 1 H), 3.91 (dd, J ) 10.7, 2.9 Hz, 1 H), 2.12-1.95 (m, 3 H),
1.69-1.53 (series of m, 6 H), 1.05 (s, 9 H), 0.97 (s, 9 H), 0.35
(s, 3 H), 0.19 (s, 3 H), 0.16 (s, 3 H), 0.12 (s, 3 H); 13C NMR (75
MHz, CDCl3) δ 163.0, 150.7, 135.7, 135.2, 129.1 (2 C), 128.2
(2 C), 127.6, 110.7, 82.7, 79.0, 72.9, 63.7, 56.1, 34.4, 31.6, 26.3
(3 C), 26.2 (3 C), 18.6, 18.4, 18.3, 12.2, -2.9, -3.0, -3.8, -4.3;
HRMS m/z (M + Na+) calcd 689.1368, obsd 689.1429; [R]18
+1.7 (c 0.47, CHCl3).
D
Ring-Opened Product 26. To a stirred benzene solution
(2 mL) of 22 (7.8 mg, 0.011 mmol) were added Bu3SnH
(9.2 µL, 0.033 mmol) and Et3B (1 M THF solution, 11.4 µL,
0.011 mmol), and the reaction mixture was stirred at rt with
O2 injected via syringe at intervals. After 2 h, the reaction
mixture was evaporated and the residue was purified by flash
chromatography on silica gel to give 26 as a yellow oil
(3.0 mg, 50% at 50% conversion): IR (neat, cm-1) 1650, 1463,
1254; 1H NMR (400 MHz, CDCl3) δ 8.14 (br s, 1 H), 7.28 (d, J
) 1.1 Hz, 1 H), 7.08 (dd, J ) 14.6, 0.7 Hz, 1 H), 5.71 (dd, J )
14.6, 8.0 Hz, 1 H), 4.19 (t, J ) 7.5 Hz, 1 H), 4.12 (d, J ) 8.2
Hz, 1 H), 2.03-1.85 (series of m, 5 H), 1.68-1.54 (m, 2 H),
1.35-1.26 (m, 2 H), 0.91 (s, 9 H), 0.89 (s, 9 H), 0.11-0.05
(m, 12 H); 13C NMR (75 MHz, CDCl3) δ 135.3, 125.8, 119.0,
112.0, 101.5, 98.6, 75.9, 75.1, 63.6, 32.5, 32.4, 25.9 (6 C), 19.1
(3 C), 12.5, -3.1, -3.5, -4.6, -4.7; ES HRMS m/z (M + Na+)
ES HRMS m/z (M + Na+) calcd 705.2087, obsd 705.2117; [R]18
D
+32.5 (c 0.93, CHCl3).
Method B: Using NIS as Electrophile. The reaction was
carried out as described above except for the substitution of
NIS (8.4 mg, 0.038 mmol) as the electrophile. The usual
workup and silica gel chromatography (10% EtOAc/hexanes)
gave 23 (52%) as a pale oil and a minor isomer (13%, based
on 1H NMR analysis, 10.5 mg total, 65% overall yield): IR
1
(CHCl3, cm-1) 1682, 1471, 1253; H NMR (500 MHz, CDCl3)
δ 8.27 (s, 1 H), 7.70 (d, J ) 1.2 Hz, 1 H), 6.56 (d, J ) 10.7 Hz,
1 H), 4.77 (dd, J ) 10.7, 2.7 Hz, 1 H), 4.05-4.02 (m, 2 H),
2.09-1.97 (series of m, 6 H), 1.69-1.64 (m, 3 H), 1.04 (s, 9 H),
1.00 (s, 9 H), 0.36 (s, 3 H), 0.21 (s, 3 H), 0.20 (s, 3 H), 0.17
(s, 3 H); 13C NMR (75 MHz, CDCl3) δ 163.2, 150.5, 135.7, 111.8,
82.0, 78.8, 72.3, 62.9, 34.6, 32.5, 31.0, 26.3 (3 C), 26.1 (3 C),
18.5, 18.3, 18.2, 12.5, -2.4, -2.8, -4.1, -4.3; ES HRMS m/z
(M + Na+) calcd 675.1575, obsd 675.1570; [R]18D +37.9 (c 0.97,
CHCl3).
calcd 549.2609, obsd 549.2616; [R]18 +26.2 (c 0.21, CHCl3).
D
Radical Reduction of 23. Iodonucleoside 23 (4.9 mg,
0.0075 mmol) and AIBN (0.4 mg, 0.0026 mmol) were dissolved
in dry toluene (0.5 mL) and this solution was added slowly to
a solution of Bu3SnH (6.1 µL, 0.023 mmol) in dry toluene
(1.5 mL) being stirred under argon at 45 °C. The temperature
was gradually raised to 60 °C and stirring was maintained
for 6 h. After being cooled to rt, the reaction mixture was
diluted with a saturated solution of NH4Cl (2 mL) and
extracted with ethyl acetate (3 × 2 mL). The combined organic
phases were washed with brine, dried, and freed of solvents.
The residue was purified by flash chromatography on silica
gel (1:4 EtOAc/hexanes) to give 27 as a white foam (0.9 mg,
22% at 25% conversion): IR (CHCl3, cm-1) 1682, 1470, 1257;
1H NMR (400 MHz, CDCl3) δ 8.00 (br s, 1 H), 7.92 (s, 1 H),
6.35 (t, J ) 7.0 Hz, 1 H), 4.12 (t, J ) 4.3 Hz, 1 H), 4.00 (t, J )
7.1 Hz, 1 H), 2.33-2.31 (m, 2 H), 2.21-2.04 (series of m, 4 H),
1.94-1.90 (m, 5 H), 0.93 (s, 9 H), 0.91 (s, 9 H), 0.12-0.07
(m, 12 H); 13C NMR (75 MHz, CDCl3) δ 163.5, 150.5, 137.2,
110.7, 84.7, 77.8, 77.3, 59.2, 43.8, 32.7, 32.6, 26.0 (3 C), 25.7
(3 C), 18.8, 18.3, 18.0, 12.6, -4.0, -4.3 (2 C), -4.9; ES HRMS
Glycosidation Reactions of 21. Method A: PhSeCl as
Electrophile. The reaction was carried out according to the
procedure described for the preparation of 22 starting with
21 (11.3 mg, 0.027 mmol), bis-O-trimethylsilylthymine (11.1
mg, 0.041 mmol), and PhSeCl (7.8 mg, 0.041 mmol). The usual
workup and silica gel chromatography (20% EtOAc/hexanes)
gave 24 as a white foam (14.4 mg, 76%) and a minor isomer
(0.8 mg, 4%).
1
For 24: IR (CHCl3, cm-1) 1690, 1464, 1134; H NMR (500
MHz, CDCl3) δ 7.82 (s, 1 H), 7.64 (d, J ) 6.8 Hz, 2 H), 7.31-
7.25 (m, 3 H), 7.21 (d, J ) 0.8 Hz, 1 H), 6.45 (d, J ) 3.2 Hz, 1
H), 4.78 (d, J ) 8.3 Hz, 1 H), 4.12-4.07 (m, 2 H), 2.16-2.11
(m, 2 H), 2.06-1.95 (m, 2 H), 1.88 (s, 3 H), 1.86-1.78 (m, 1
H), 1.68-1.56 (m, 1 H), 1.19-1.09 (m, 28 H); 13C NMR (75
MHz, CDCl3) δ 163.4, 149.5, 136.3, 135.8, 129.2 (2 C), 128.3
(2 C), 128.1, 111.9, 72.9, 72.8, 71.3, 65.3, 53.5, 29.9, 29.5, 17.6
(2 C), 17.21 (3 C), 17.19, 17.12 (2 C), 17.09, 13.7, 13.6, 12.9,
12.7, 12.6; ES HRMS m/z (M + Na+) calcd 719.1880, obsd
m/z (M + Na+) calcd 549.2609, obsd 549.2616; [R]19 +19.8
D
(c 0.64, CHCl3).
Radical Reduction of 24. A stirred toluene solution (4 mL)
of 24 (30 mg, 0.043 mmol) was treated with Bu3SnH (35 µL,
0.13 mmol) and Et3B (1 M THF solution, 43 µL, 0.043 mmol)
at -78 °C, and the reaction mixture was provided with a
continuous O2 flow. After 1 h, the solvents were evaporated
and the residue was purified by flash chromatography on silica
gel (20% EtOAc/hexanes) to give 28 (24 mg, quantitative) as
719.1924; [R]18 +39.3 (c 0.30, CHCl3).
D
For the minor isomer: IR (CHCl3, cm-1) 1689, 1465, 1140;
1H NMR (300 MHz, CDCl3) δ 7.82 (br s, 1 H), 7.54-7.51 (m, 2
H), 7.26-7.14 (m, 3 H), 6.86 (d, J ) 1.1 Hz, 1 H), 6.24 (d, J )
9.9 Hz, 1 H), 4.16-4.05 (m, 2 H), 3.92 (dd, J ) 11.8, 9.9 Hz, 1
H), 2.28-2.25 (m, 1 H), 2.05-1.83 (series of m, 4 H), 1.74 (d,
1
a colorless oil: UV (MeOH) λmax 272 nm (ꢀ 24 800); H NMR
J ) 1.1 Hz, 3 H), 1.55-1.48 (m, 1 H), 1.17-1.00 (m, 28 H); 13
C
(300 MHz, CDCl3) δ 8.26 (br s, 1 H), 7.69 (d, J ) 1.1 Hz, 1 H),
6.17 (dd, J ) 9.4, 1.2 Hz, 1 H), 4.44 (dd, J ) 12.6, 6.6 Hz,
1 H), 4.02 (dd, J ) 11.5, 7.3 Hz, 1 H), 2.45 (dd, J ) 12.6, 9.4
Hz, 1 H), 2.12 (ddd, J ) 12.6, 6.6, 1.2 Hz, 1 H), 1.96-1.90
(series of m, 5 H), 1.74-1.58 (m, 3 H), 1.37-1.29 (m, 1 H),
1.20-0.98 (m, 28 H); 13C NMR (75 MHz, CDCl3) δ 163.1, 150.6,
136.5, 111.5, 72.1, 71.2, 70.7, 54.8, 39.0, 30.1, 28.7, 17.7 (2 C),
17.5, 17.33, 17.25 (2 C), 17.22, 17.16, 17.09, 16.7, 13.6, 12.9,
12.7, 12.4; ES HRMS m/z (M + Na+) calcd 563.2402, obsd
NMR (75 MHz, CDCl3) δ 162.4, 150.0, 135.7, 134.6, 129.1
(2 C), 128.0 (2 C), 127.3, 111.7, 72.9, 71.8, 67.8, 61.6, 50.8, 29.8,
28.5, 17.7, 17.6, 17.5 (2 C), 17.4, 17.3, 17.2, 17.10, 17.06, 16.4,
14.6, 13.6, 13.1, 12.7; ES HRMS m/z (M + Na+) calcd 719.1880,
obsd 719.1889; [R]22 -26.1 (c 0.87, CHCl3).
D
Method B: NIS as Electrophile. The reaction was carried
out according to the procedure described for the preparation
of 23 starting with 21 (12.8 mg, 0.031 mmol), bis-O-trimethyl-
silylthymine (12.5 mg, 0.047 mmol), and NIS (10.4 mg, 0.047
mmol). The usual workup and silica gel chromatography (15%
EtOAc/hexanes) gave 25 as a white solid (14.4 mg, 70%, along
with 12% minor isomer, 2.5 mg): mp 164-166 °C; IR (CHCl3,
cm-1) 1712, 1464, 1388; 1H NMR (500 MHz, CDCl3) δ 8.26
563.2412; [R]22 -62.3 (c 0.65, CH3OH).
D
Completion of Spiro-2′-deoxy-4′-thiathymidine Ana-
logue Synthesis. A stirred THF solution (2 mL) of 28 (20 mg,
0.037 mmol) was treated with tetrabutylammonium fluoride
(1 M THF solution, 81 µL, 0.081 mmol) under Ar at 0 °C. After
2 h, the reaction mixture was evaporated and the residue was
chromatographed on silica gel (20% EtOH/toluene) to afford
29 (10 mg, 90%) as a white solid: mp 104-105 °C; UV (MeOH)
λmax 272 nm (ꢀ 8900); 1H NMR (300 MHz, CD3OD) δ 8.40
(d, J ) 1.1 Hz, 1 H), 6.46 (t, J ) 7.6 Hz, 1 H), 4.14 (t, J ) 3.7
Hz, 1 H), 4.01 (t, J ) 7.3 Hz, 1 H), 2.37 (dd, J ) 7.6, 3.9 Hz,
2 H), 2.25-2.15 (m, 1 H), 2.08-2.00 (m, 1 H), 1.96-1.87 (series
of m, 4 H), 1.68-1.58 (m, 3 H); 13C NMR (75 MHz, CD3OD)
δ 168.9, 155.3, 142.6, 114.2, 81.8, 80.8, 77.8, 64.3, 46.5, 36.1,
(s, 1H, NH), 7.56 (d, J6,CH3 ) 1.1 Hz, 1 H, H-6), 6.60 (d, J1′,2′
)
2.8 Hz, 1 H, H-1′), 4.56 (dd, J2′,3′ ) 7.4 and J1′,2′ ) 2.8 Hz, 1 H,
H-2′), 4.06 (dd, J5′,6′R ) 11.7 and J5′,6′â ) 7.2 Hz, 1 H, H-5′),
3.94 (d, J2′,3′ ) 7.4 Hz, 1 H, H-3′), 2.39-2.34 (m, 1 H, H-8′R),
2.17-2.11 (m, 1 H, H-8′â), 2.05-1.91(m, 5 H, CH3, H-6′â,
H-7′R), 1.83-1.77 (m, 1 H, H-7′â), 1.61-1.52 (m, 1 H, H-6′R),
1.23-1.07 (m, 28 H, TIPDS); 13C NMR (75 MHz, CDCl3)
δ 149.9 (2 C), 135.8, 112.3, 101.4, 73.2, 72.0, 71.4, 65.7, 45.1,
33.0, 29.8, 29.1, 17.5, 17.2 (4 C), 13.6 (4 C), 12.7 (4 C); ES
J. Org. Chem, Vol. 70, No. 5, 2005 1591