J. Y. Melamed et al. / Bioorg. Med. Chem. Lett. 18 (2008) 5307–5310
5309
Table 1
Inhibition of HIV-1 integrase catalytic activities and HIV-1 replication in cells by
carboxamides
a series of 5-(1-H or 1-alkyl-5-oxopyrrolidin-3-yl)-8-hydroxy-[1,6]-naphthyridine-7-
O
R
N
F
N
H
N
N
R'
O
OH
Compound
R
R0
Inhibition of strand transfer IC50
(nM)a
Antiviral activity IC95 (nM) (10%
FBS)b
Antiviral activity IC95 (nM) (50%
NHS)b
%Prot.Bndc Log
Pd
9
Me
Et
i-Pr
H
CH2C(O)NMe2
Me
Et
H
H
H
H
H
20
14
40
24
33
31 (n = 3)
16 (n = 2)
31 (n = 2)
42 (n = 3)
31 (n = 3)
31 (n = 3)
38 (n = 5)
125 (n = 3)
125 (n = 3)
125 (n = 3)
83 (n = 3)
63 (n = 3)
63 (n = 3)
81 (n = 3)
98.8
98.9
97.8
insol.
94.8
97.0
96.0
2.3
2.7
2.7
n.d.
1.8
1.6
1.9
10
11
12
13
14
15
SO2Me 123
SO2Me 26
a
The strand transfer assay was performed with recombinant HIV-integrase (100 nM) preassembled on immobilized oligonucleotides using 0.5 nM DNA.2 Values are means
of at least two experiments with a lower limit of accuracy ꢀ5 nM, standard deviation is approximately twofold.
b
Antiviral activity was assessed by measuring the decrease in HIV-1 p24 core antigen in MT-4 human T-lymphoid cells/HIV-1 IIIb cultured in the presence of increasing
concentrations of inhibitor. Antiviral activity in cell culture (IC95) is the drug concentration, which inhibits 95% viral growth relative to control. FBS: run with 10% fetal bovine
serum, NHS: run with 50% normal human serum, see Ref. 4
c
Measure of the percentage of test compound bound to human serum proteins, see Ref. 14.
Log P measurement (partition coefficient), see Ref. 15.
d
Marchand, C. Nat. Rev. Drug Disc. 2005, 4, 236; (c) Hazuda, D. J.; Felock, P.;
Witmer, M.; Wolfe, A.; Stillmock, K.; Grobler, J. A.; Espeseth, A.; Gabryelski, L.;
Schleif, W.; Blau, C.; Miller, M. D. Science 2000, 287, 646; (d) Markowitz, M.;
Table 2
Rat pharmacokinetics
O
R
Morales-Ramirez, J. O.; Nguyen, B. Y.; Kovacs, C. M.; Steigbigel, R. T.; Cooper, D.
A.; Liporace, R.; Schwartz, R.; Isaacs, R.; Gilde, L. R.; Penning, L.; Zhao, J.;
Teppler, H. J. Acquired Immune Deficiency Syndromes 2006, 43, 509; (e) Summa,
V.; Petrocchi, A.; Scarpelli, R.; Gardelli, C.; Muraglia, E.; Nizi, E.; Laufer, R.;
Gonzalez, P.; Fiore, F.; Jones, P.; Monteagudo, E.; Hazuda, D.; Witmer, M.;
Rowley, M. J. Med. Chem. 2008; f Crescenzi, B.; Gardelli, C.; Mruaglia, E.; Nizi, E.;
Orvieto, F.; Pace, P.; Pescatore, G.; Petrocchi, A.; Poma, M.; Rowley, M.; Sarpelli,
R.; Summa, V. Preparation of N-substituted hydroxypyrimidinone carboxamide
inhibitors of HIV integrase. Merck and Co, Inc.: USA. 02-GB04753[03035077],
217, 05-01-0003. WO 10-21-2002.
N
F
N
H
N
N
R'
O
OH
Compound
R
R’
Cl (mL/min/kg)b
T1/2 (h)b
% Fc
9a
Me
H
H
2.5
23.4
17.2
1.3
3.4
0.67
65
5
4
2. Egbertson, M. S.; Moritz, H. M.; Melamed, J. Y.; Han, W.; Perlow, D. S.; Kuo, M.
S.; Embrey, M.; Vacca, J. P.; Zrada, M. M.; Cortes, A. R.; Wallace, A.; Leonard, Y.;
Hazuda, D. J.; Miller, M. D.; Felock, P. J.; Stillmock, K. A.; Witmer, M. V.; Schleif,
W.; Gabryelski, L. J.; Moyer, G.; Ellis, J. D.; Jin, L.; Xu, W.; Braun, M. P.; Kassahun,
K.; Tsou, N. N.; Young, S. D. Bioorg. Med. Chem. Lett. 2007, 17, 1392.
3. Hazuda, D. J.; Felock, P.; Hastings, J. C.; Pramanik, B.; Wolfe, A. J. Virol. 1997, 71,
7005.
4. Vacca, J. P.; Dorsey, B. D.; Schleif, W. A.; Levin, R. B.; McDaniel, S. L.; Darke, P. L.;
Zugay, J.; Quintero, J. C.; Blahy, O. M.; Roth, E.; Sardana, V. V.; Schlabac, A. J.;
Graham, P. I.; Condra, J. H.; Gotlib, L.; Holloway, M. K.; Lin, J.; Chen, I.-W.;
Vastag, K.; Ostovic, D.; Anderson, P. S.; Emini, E. E.; Huff, J. R. Proc. Natl. Acad. Sci.
U.S.A. 1994, 91, 4096.
5. Embrey, M. W.; Wai, J. S.; Funk, T. W.; Homick, C. F.; Perlow, D. S.; Young, S. D.;
Vacca, J. P.; Hazuda, D. J.; Felock, P. J.; Stillmock, K. A.; Witmer, M. V.; Moyer, G.;
Schleif, W. A.; Gabryelski, L. J.; Jin, L.; Chen, I. W.; Ellis, J. D.; Wong, B. K.; Lin, J. H.;
Leonard, Y. M.; Tsou, N. N.; Zhuang, L. Bioorg. Med. Chem. Lett. 2005, 15, 4550.
6. Anthony, N. J.; Gomez, R. P.; Young, S. D.; Egbertson, M.; Wai, J. S.; Zhuang, L.;
Embrey, M.; Tran, L.; Melamed, J. Y.; Langford, H. M.; Guare, J. P.; Fisher, T. E.;
Jolly, S. M.; Kuo, M. S.; Perlow, D. S.; Bennett, J. J.; Funk, T. W. Preparation of
(poly)azanaphthalenyl carboxamides as HIV integrase inhibitors. PCT Int. Appl.,
2002, 434 pp. CODEN: PIXXD2 WO 0230930 A2 20020418.
13a
14
CH2C(O)NMe2
Me
SO2Me
a
Compound dosed as Na salt.
Dosed iv in DMSO at 2 mg/kg.
Dosed po in 1% methylcellulose at 10 mg/kg.
b
c
In summary, we have developed an efficient route for the prepa-
ration of 4-[5-(1,6-naphthyridyl)]pyrrolidinones. The synthetic se-
quence permits late-stage variation of the lactam nitrogen
substituent without tedious protection/deprotection steps. This
methodology can also be used to prepare various 4-aryl substituted
pyrrolidinones. Pyrrolidinone 9 is a potent inhibitor of HIV-1 integr-
ase in cell culture. The compound exhibited low clearance and good
oral bioavailability in rat. Installation of polar substituents on the
pyrrolidinone nitrogen or the benzylamide provides compounds
with lower protein binding and reduced shift in antiviral activity.
7. Compound 4 was prepared by the procedure described by Hollingworth, G. J.;
Perkins, G.; Sweeney, J. J. Chem. Soc., Perkin Trans. 1, 1996, 1913. Compound 5
was prepared as follows: To
hydroxy-5-bromo-1,6-naphthyridine-7-carboxamide 3 (2.0 g, 5.32 mmol) in
anhydrous toluene (35 mL) under nitrogen were added
dichloro[bis(triphenylphosphine)]palladium (II) (0.374 g, 0.53 mmol) and 4-
(tributylstannyl)furan-2(5H)-one (1.98 g, 5.32 mmol). The solution was
heated to reflux for 4.5 h, cooled, and the solids that precipitated from the
solution were collected by vacuum filtration (1.85 g, 92%). The compound was
taken onto the next step without further purification. 1H NMR (400 MHz,
a stirring solution of N-(4-fluorobenzyl)-8-
Acknowledgments
The authors thank Carl Homnick for chiral HPLC support, Harri
Ramjit, Charles Ross, and Arthur Coddington for mass spectroscopy
analysis and Ken Anderson, Matt Zrada, and Bang-Lin Wan for pro-
viding protein binding and log P data. We thank David Evans and
Steve Pitzenberger for helpful discussions.
4
DMSO-d6),
d 9.77 (1H, t, J = 6.4 Hz), 9.23 (1H, d, J = 3.4 Hz), 8.92 (1H, d,
J = 8.0 Hz), 7.91–7.88 (1H, dd, J = 8.6, 4.2 Hz), 7.46–7.42 (2H, dd, J = 8.6, 5.6 Hz),
7.18 (2H, t, J = 8.9 Hz), 6.99 (1H, s), 5.69 (2H, s), 4.60 (2H, d, J = 6.4 Hz). ES HRMS
calcd for C20H14N3O4F (M+H): 380.1041, Found: 380.1050.
References and notes
8. To
a heavy wall glass pressure vessel was added 5 (0.83 g, 1.93 mmol)
dissolved in a saturated solution of methylamine in MeOH (15.0 mL). The
solution was heated to 55 °C for 2 h, cooled, and concentrated under reduced
pressure. The crude material was dissolved in DMF (2 mL) and injected on the
1. (a) Dayam, R.; Al-Mawsawi, L. Q.; Zawahir, Z.; Witvrouw, M.; Debyser, Z.;
Neamati, N. J. Med. Chem. 2008, 51, 1136; (b) Pommier, Y.; Johnson, A. A.;