9864
S. Weiss et al. / Bioorg. Med. Chem. 16 (2008) 9858–9866
7.15–7.30 (m, 20H), 7.90–7.95 (m, 2H). C94H126N16O17: MS (ES): m/
z (%) 827 (20), 877 (100), 1653 (6), 1753 (18, M+).
4.8.2. (E)-{[4-(4-{15-[1-(4-{[(1Z)-Ammonio({(4R)-4-[(dipheny-
lacetyl)amino]-5-[(4-hydroxybenzyl)amino]-5-oxopentyl}-
amino)methylene]amino}-4-oxobutyl)-1H-1,2,3-triazol-4-yl]-2,
5,8,11,14-pentaoxapentadec-1-yl}-1H-1,2,3-triazol-1yl) butan-
oyl]amino}({(4R)-4-[(diphenylacetyl)amino]-5-[(4-hydroxy-
benzyl)amino]-5-oxopentyl}imino)methanaminium
4.7.3. tert-Butyl{(1E,14E,20R)-20-{[(4-tert-butoxybenzyl)-
amino]carbonyl}-1-({(4R)-5-[(4-tert-butoxybenzyl)amino]-4-
[(diphenylacetyl)amino]-5-oxopentyl}amino)-15-[(tert-
butoxycarbonyl)amino]-3,13,22-trioxo-23,23-diphenyl-5,8,11-
trioxa-2,14,16,21-tetraazatricosa-1,14-dien-1-yl}carbamate (15c)
Column chromatography: (EA Rf = 0.6); the product is a white
solid (190 mg, 65%), mp > 190 °C. 1H NMR (300 MHz, CDCl3): 1.31
(m, 18H), 1.42–1.48 (m, 18H), 1.50–1.90 (m, 8H), 3.20–3.50 (m,
4H), 3.65–3.85 (m, 8H), 4.20–4.40 (m, 8H), 4.52–4.70 (m, 2H),
4.87–4.98 (m, 2H), 6.80–6.90 (m, 4H), 7.00–7.10 (m, 4H), 7.18–
7.30 (m, 20H). C80H104N10O15: MS (ES): m/z (%) 623(40), 673(30),
734(100), 1346(7), 1446(48, M+).
bis(trifluoroacetate) (16b)
The product is obtained as a white solid (77 mg, 100%),
mp > 190 °C. 1H NMR (300 MHz, DMSO-d6): 1.30–1.75 (m, 8H),
2.00 –2.20 (m, 4H), 2.40–2.60 (t, J = 6.87, 4H), 3.15–3.30 (dd,
J1 = 5.89, J2 = 11.55, 4H), 3.45–3.60 (m, 16H), 4.15–4.30 (m, 4H),
4.35–4.50 (m, 6H), 4.55–4.60 (br s, 4H), 5.13 (s, 2H), 6.65–6.70
(br d, J = 8.36, 4H), 6.95–7.05 (br d, J = 8.32, 4H), 7.15–7.30 (m,
20H), 7.96 (s, 2H), 8.35–8.40 (t, J = 5.49, 2H), 8.45–8.55 (d,
J = 7.97, 2H), 8.50–8.90 (br s, 4H), 9.14 (br s, 2H), 11.81 (s, 2H).
13C NMR (75 MHz, DMSO-d6): 24.2, 29.3, 33.0, 40.5, 41.5, 48.2,
52.2, 55.8, 63.4, 68.9, 69.6, 114.9, 123.8, 126.5, 128.1–128.9,
140.2, 143.9, 152.6, 156.2, 170.9, 174.1. C76H94N16O13: MS (ES):
m/z (%) 494 (11), 721 (100), 1440 (5, M+). IR (cmꢂ1): 3286, 2926,
4.7.4. N-(4-tert-Butoxybenzyl)-N5-((Z)-[(tert-butoxycarbonyl)-
imino]{[4-(4-phenyl-1H-1,2,3-triazol-1-yl)butanoyl]amino}-
methyl)-N2-(diphenylacetyl)-D-ornithinamide (15d)
Column chromatography: (EA Rf = 0.6); the product is a white
solid (122 mg, 72%), mp > 190 °C. 1H NMR (300 MHz, CDCl3): 1.31
(m, 9H), 1.40 (m, 9H), 1.50–1.90 (m, 4H), 2.10–2.50 (m, 4H),
3.15–3.45 (m, 2H), 4.20–4.50 (m, 4H), 4.52–4.70 (m, 1H), 4.96
(m, 1H), 6.84–6.90 (m, 2H), 7.02–7.09 (m, 2H), 7.18–7.45 (m,
13H), 7.68–7.71 (m, 1H), 7.78–7.83 (m, 2H). C48H58N8O6: MS
(ES): m/z (%) 843(100, M+). C48H58N8O6: calc. C 68.4 H 6.9 N 13.3,
found: C 67.2 H 7.6 N 13.0.
1656, 1515, 1450, 1362, 1198, 1127, 700. UV (MeOH): k(
e)
269(3 ꢁ 103). HPLC: tr = 12.6 min.
4.8.3. ((14Z,20R)-15-Ammonio-1-({(4R)-4-[(diphenylacetyl)-
amino]-5-[(4-hydroxybenzyl)amino]-5-oxopentyl}amino)-20-
{[(4-hydroxybenzyl)amino]carbonyl}-3,13,22-trioxo-23,23-
diphenyl-5,8,11-trioxa-2,14,16,21-tetraazatricos-14-en-1-
ylidene)ammonium bis(trifluoroacetate) (16c)
The product is obtained as a white solid (70 mg, 100%),
mp > 190 °C. 1H NMR (300 MHz CD3OD): 1.40–1.90 (m, 8H),
3.20–3.30 (br m, 4H), 3.65–3.80 (m, 8H), 4.15–4.30 (m, 4H),
4.40–4.50 (m, 2H), 5.07 (s, 2H), 6.65–6.75 (br d, J = 8.37, 4H),
7.00–7.05 (br d, J = 8.37, 4H), 7.20–7.30 (m, 20H). 13C NMR (75
MHz, DMSO-d6): 25.5, 30.3, 42.1, 43.8, 54.3, 58.7, 71.3, 71.4,
72.2, 116.4, 128.2, 129.6–130.3, 140.9, 154.7, 157.9, 173.3–
174.9. C62H72N10O11: MS (ES): m/z (%) 567(100), 1133(13, M+).
IR (cmꢂ1): 3284, 2928, 1655, 1515, 1451, 1358, 1199, 1130,
4.7.5. tert-Butyl [(Z)-[(4-{[4-({bis[(1-{4-[({(1Z)-({5-[(4-tert-but-
oxybenzyl)amino]-4-[(diphenylacetyl)amino]-5-oxopentyl}-
amino)[(tert-butoxycarbonyl)amino]methylene}amino)car-
bonyl]benzyl}-1H-1,2,3-triazol-4-yl)methyl]amino}methyl)-1H-
1,2,3-triazol-1-yl]methyl}benzoyl)amino]({5-[(4-tert-butoxyb-
enzyl)amino]-4-[(diphenylacetyl)amino]-5-oxopentyl}imino)-
methyl]carbamate (15e)
Column chromatography: (EA/MeOH 9:1 Rf = 0.7); the product
is
a
pale yellow solid (208 mg, 43%), mp > 190 °C.
1023, 1000, 823, 700. UV (MeOH): k(
e
) 277(2 ꢁ 103). HPLC:
C141H165N25O18: MS (ES): m/z (%) 834 (20), 1250 (100), 2400 (2),
tr = 12.6 min.
2500 (8, M+).
4.8.4. ({(4R)-4-[(Diphenylacetyl)amino]-5-[(4-hydroxybenzyl)-
amino]-5-oxopentyl}amino){[4-(4-phenyl-1H-1,2,3-triazol-1-
yl)butanoyl]amino}methaniminium trifluoroacetate (16d)
The product is obtained as a white solid (117 mg, 100%),
mp > 190 °C. 1H NMR (400 MHz, DMSO-d6): 1.35–1.49 (m, 2H),
1.49–1.75 (m, 2H), 2.12–2.21 (p, J1 = 7.04, J2 = 7.14, 2H), 2.47–
2.53 (m, 2H), 3.17–3.26 (dd, J1 = 6.59, J2 = 13.01, 2H), 4.09–4.20
(m, 2H), 4.30–4.36 (dd, J1 = 7.87, J2 = 14.15, 1H), 4.43–4.49 (t,
J = 6.91, 2H), 5.12 (s, 1H), 6.65–6.69 (d, J = 8.49, 2H), 6.98–7.02
(d, J = 8.51, 2H), 7.16–7.24 (m, 2H), 7.25–7.30 (m, 8H), 7.31–
7.35 (m, 1H), 7.40–7.46 (m, 2H), 7.80–7.85 (m, 2H), 8.30–8.36
(t, J = 5.80, 1H), 8.45–8.48 (d, J = 8.06, 1H), 8.56 (s, 1H), 8.60–
8.90 (m, 2H), 9.12–9.20 (m, 1H), 11.85 (s, 1H). 13C NMR (101
MHz, DMSO-d6): 24.3, 29.4, 33.0, 40.5, 41.7, 48.6, 52.3, 56.0,
115.0, 116.0, 121.4, 125.1, 126.6, 127.9–129.2, 130.8, 140.4,
146.4, 152.8, 156.3, 159.1, 171.0, 174.3. C39H42N8O4: MS (ES):
m/z (%) 687(100, M+). IR (cmꢂ1): 3285, 2930, 1628, 1516,
4.8. General procedure for preparation of compounds 16a–16e
The appropriate Boc- and tBu-protected ligand (15) (0.03–
0.15 mmol) was dissolved in 5 mL of DCM/TFA 1:1 and stirred for
2 h. The solvent was removed completely under reduced pressure
and the oily residue was repeatedly dissolved in DCM and the sol-
vent evaporated to remove TFA traces. The deprotected ligands
were purified by HPLC for the cell assays.
4.8.1. (E)-{[4-(4-{4-[1-(4-{[(1Z)-Ammonio({(4R)-4-
[(diphenylacetyl)amino]-5-[(4-hydroxybenzyl)amino]-5-
oxopentyl}amino)methylene]amino}-4-oxobutyl)-1H-1,2,3-
triazol-4-yl]phenyl}-1H-1,2,3-triazol-1-yl)butanoyl]amino}-
({(4R)-4-[(diphenylacetyl)amino]-5-[(4-hydroxybenzyl)amino]-
5-oxopentyl}imino)methanaminium bis(trifluoroacetate) (16a)
The product is obtained as a pale yellow solid (75 mg, 100%),
mp > 190 °C. 1H NMR (300 MHz, CD3OD): 1.40–1.90 (m, 8H),
2.20–2.60 (m, 8H), 3.10–3.25 (m, 4H), 4.15–4.25 (m, 4H), 4.30–
4.40 (m, 2H), 4.40–4.60 (m, 4H), 5.06 (s, 2H), 6.70 (d, J = 8.53,
4H), 7.00 (d, J = 8.49, 4H), 7.20–7.35 (m, 20H), 7.85–7.90 (m, 2H),
8.35–8.40 (m, 2H). 13C NMR (75 MHz, DMSO-d6): 24.3, 29.4, 33.0,
40.5, 41.7, 48.6, 52.3, 56.0, 115.0, 116.0, 121.4, 125.1, 126.6,
127.9, 129.2, 130.8, 140.4, 146.4, 152.8, 156.3, 159.1, 171.0,
174.3. C72H78N16O8: MS (ES): m/z (%) 649(100), 1296(6, M+). IR
(cmꢂ1): 3285, 2934, 1638, 1514, 1445, 1359, 1194, 1128, 699. UV
1448, 1379, 1199, 1132, 694. UV (MeOH): k(
e
) 235(15ꢀ103).
HPLC: tr = 13.8 min.
4.8.5. (Ammoniotris{methylene-1H-1,2,3-triazole-4,1-diylmeth-
ylene-4,1-phenylenecarbonylimino[({4-[(diphenylacetyl)amino]-
5-[(4-hydroxybenzyl)amino]-5-oxopentyl}amino)methylylidene]})
triammonium tetrakis(trifluoroacetate) (16e)
The product is a pale yellow solid (82 mg, 100%), mp > 190 °C.
1H NMR (300 MHz DMSO-d6): 1.40–1.70 (m, 12H), 3.30–3.40 (br
m, 6H), 4.15–4.50 (m, 15H), 5.13 (s, 3H), 5.82 (s, 6H), 6.65–6.70
(MeOH): k(
e
) 277 (16 ꢁ 103). HPLC: tr = 13.3 min.