PAPER
Anthrax Tetrasaccharide: Large-Scale Preparation
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H, H-5I), 3.96 (dd, J1,2 = 1.6 Hz, J2,3 = 3.2 Hz, 1 H, H-2I), 3.66 (m,
4 H, OCH3 and H-4I), 3.18–3.12 (m, 3 H, H-2II, H-3II, and H-5II),
2.50 (t, J = 9.3 Hz, 1 H, H-4II), 2.06 (s, 3 H, SCH3), 1.35(d,
J5,6 = 6.4 Hz, 3 H, H-6I), 1.12 (d, J5,6 = 5.8 Hz, 3 H, H-6II).
13C NMR (150 MHz, CDCl3): d = 103.9 (C-1II), 85.2 (C-5II), 84.6
(C-1I), 84.7 (C-3II), 80.8 (C-4I), 80.1 (C-2I), 78.7 (C-3I), 75.0
(CH2Ph), 74.8 (CH2Ph), 73.0 (CH2Ph), 72.5 (C-2II), 68.3 (C-5I),
60.4 (OCH3), 58.1 (C-4II), 18.0 (C-6II), 17.9 (C-6I), 13.5 (SCH3).
13C NMR (150 MHz, CDCl3): d = 171.0 (C=O), 169.3 (C=O), 103.8
(C-1II), 84.5 (C-2II), 84.3 (C-1I), 80.7 (C-4I), 80.7 (C-3¢), 80.4 (C-
3II), 80.0 (C-2I), 79.2 (C-3I), 74.8 (CH2Ph), 73.4 (CH2Ph), 73.2
(CH2Ph), 71.0 (C-5II), 68.3 (C-5I), 60.6 (OCH3), 55.7 (C-4II), 47.2
(C-2¢), 26.6 and 26.5 [C(CH3)2], 22.4 (CH3CO), 18.0 (C-6I), 17.9
(C-6II), 13.5 (SCH3).
MS (TOF): m/z = 783.3 [M + NH4]+, 788.3 [M + Na]+.
HRMS (TOF): m/z [M + NH4]+ calcd for C42H59N2O10S: 783.3890;
MS (TOF): m/z = 624.3 [M + H]+, 646.2 [M + Na]+.
found: 783.3878.
HRMS (TOF): m/z [M + H]+ calcd for C35H46NO7S: 624.2995;
found: 624.3011.
5-Methoxycarbonylpentyl 4-(3-O-Acetyl-3-methylbutanami-
do)-3-O-benzyl-4,6-dideoxy-2-O-methyl-b-D-glucopyranosyl-
(1→3)-2,4-di-O-benzyl-a-L-rhamnopyranosyl-(1→3)-2,4-di-O-
benzyl-a-L-rhamnopyranosyl-(1→2)-3,4-di-O-benzyl-a-L-
rhamnopyranoside (13)
Methyl 2,4-Di-O-benzyl-3-O-[3-O-benzyl-4,6-dideoxy-4-(3-hy-
droxy-3-methylbutanamido)-2-O-methyl-b-D-glucopyranosyl]-
1-thio-a-L-rhamnopyranoside (11)
A mixture of 4 (4.41 g, 5.53 mmol), 12 (4.23 g, 5.53 mmol), and 4
Å MS (3.0 g) in CH2Cl2 (200 mL) was stirred under N2 at r.t. for 30
min, cooled to –50 °C, and NIS (1.86 g, 8.30 mmol) followed by
AgOTf (991 mg. 3.87 mmol) was added. The stirring was continued
at the same temperature for 6 h, and then overnight at r.t., when TLC
(8:1 toluene–acetone) showed that the reaction was complete. Et3N
(2.5 mL) was added to quench the reaction and, after filtration
through a Celite pad, the filtrate was washed successively with 10%
aq Na2S2O3 (2 × 50 mL) and brine (150 mL). Concentration of the
organic phase and chromatography of the residue gave 13; yield:
5.96 g (71%); colorless oil; [a]D –21.60 (c 1.19, CHCl3).
1H NMR (600 MHz, CDCl3): d = 5.15 (d, J = 9.1 Hz, 1 H, NH), 5.09
(br s, 1 H, H-1III), 5.07 (d, J1,2 = 1.8 Hz, 1 H, H-1II), 5.00–4.42 (m,
16 H, 7 × CH2Ph, H-1I, H-1IV), 4.12 (t, J = 3.0 Hz, 1 H, H-3II), 4.10
(t, J = 3.0 Hz, 1 H, H-3III), 3.99 (t, J = 2.0 Hz, 1 H, H-2I), 3.90 (dd,
J1,2 = 1.8 Hz, J2,3 = 3.0 Hz, 1 H, H-2III), 3.82–3.75 (m, 4 H, H-3I, H-
2II, H-5II, H-5III), 3.66–3.58 (m, 10 H, H-1a, H-5I, H-4III, H-4IV,
CO2CH3 and OCH3), 3.53 (m, 1 H, H-4II), 3.39 (t, J = 9.4 Hz, 1 H,
H-4I), 3.35–3.31 (m, 2 H, H-1b and H-3IV), 3.18–3.15 (m, 2 H, H-
2IV, H-5IV), 2.55 (ABq, J = 13.7 Hz, 2 H, H-2¢), 2.30 (t, J = 7.5 Hz,
H-5), 1.86 (s, 3 H, CH3CO), 1.63 (m, 2 H, H-4), 1.54 (m, 2 H, H-2),
1.49 and 1.48 [2 s, C(CH3)2], 1.34 (m, 2 H, H-3), 1.28 (d, J5,6 = 5.4
Hz, 3 H, H-6III), 1.26 (d, J5,6 = 6.2 Hz, 3 H, H-6I), 1.23 (d, J5,6 = 6.3
Hz, 3 H, H-6II), 1.02 (d, J5,6 = 6.2 Hz, 3 H, H-6IV).
HATU (4.96 g, 13.1 mmol) followed by Hünig’s base (1.68 g, 13.1
mmol) was added to a solution of 10 (5.4 g, 8.7 mmol) and 3-hy-
droxy-3-methylbutanoic acid (1.36 g, 13.1 mmol) in CH2Cl2 (100
mL). The mixture was stirred at r.t. for 1.5 h when TLC (1:1 hex-
ane–EtOAc) showed that compound 10 was completely consumed.
After partitioning between CH2Cl2 (200 mL) and a mixture of aq
NaHCO3 (50 mL) and brine (150 mL), the organic phase was dried,
concentrated, and the residue was chromatographed to give 11;
yield: 5.28 g (85%); colorless oil; [a]D –84.32 (c 2.3, CHCl3).
1H NMR (600 MHz, CDCl3): d = 5.42 (d, J = 9.0 Hz, 1 H, NH),
5.05 (d, J1,2 = 1.2 Hz, 1 H, H-1I), 5.00–4.58 (m, 7 H, including d,
J1,2 = 7.8 Hz at 4.60 H-1II and CH2Ph), 4.00 (dd, J2,3 = 3.3 Hz,
J3,4 = 9.6 Hz, 1 H, H-3I), 3.98 (m, 1 H, H-5I), 3.96 (m, 1 H, H-2I),
3.72–3.64 (m, 5 H, H-4I, H-4II and OCH3), 3.36 (dd, J2.3 = 9.1 Hz,
J3,4 = 10.2 Hz, 1 H, H-3II), 3.30 (m, 1 H, H-5II), 3.20 (dd, J1,2 = 7.8
Hz, J2,3 = 9.1 Hz, 1 H, H-2II), 2.20 (ABq, J = 15 Hz, 2 H, H-2¢), 2.06
(s, 3 H, SCH3), 1.36 (d, J5,6 = 6.3 Hz, 3 H, H-6I), 1.23 (s, 3 H, CH3),
1.20 (s, 3 H, CH3), 1.16 (d, J5,6 = 5.6 Hz, 3 H, H-6II).
13C NMR (150 MHz, CDCl3): d = 172.3 (C=O), 103.8 (C-1II), 84.8
(C-2II), 84.2 (C-1I), 80.7 (C-4I), 80.0 (C-3II), 79.9 (C-2I), 79.2 (C-
3I), 74.8 (CH2Ph), 73.7 (CH2Ph), 73.2 (CH2Ph), 70.9 (C-5II), 69.4
(C-3¢), 68.3 (C-5I), 60.5 (OCH3), 55.6 (C-4II), 47.7 (C-2¢), 29.3 [2 ×
C, C(CH3)2], 18.0 (C-6II), 17.9 (C-6I), 13.5 (SCH3).
MS (TOF): m/z = 741.3 [M + NH4]+, 746.3 [M + Na]+.
HRMS (TOF): m/z [M + NH4]+ calcd for C40H57N2O9S: 741.3785;
13C NMR (150 MHz, CDCl3): d = 103.7 (C-1IV), 100.4 (C-1III), 98.9
(C-1II), 98.8 (C-1I), 84.5 (C-2IV), 80.8 (C-4III), 80.6 (C-4I), 80.5 (C-
4II), 80.4 (C-3I), 80.3 (C-3¢), 80.0 (C-3IV), 79.2 (C-2III), 78.7 (C-3III),
78.0 (2 × C, C-2II and C-3II), 75.4 (CH2Ph), 74.8 (2 × C, C-2I and
CH2Ph), 74.5 (CH2Ph), 73.4 (CH2Ph), 73.3 (CH2Ph), 72.3 (CH2Ph),
72.0 (CH2Ph), 70.9 (C-5IV), 68.5 (C-5II), 68.3 (C-5III), 67.8 (C-5I),
67.1(C-1), 60.5 (OCH3), 55.6 (C-4IV), 51.4 (CO2CH3), 47.2 (C-2¢),
33.9 (C-5), 29.1 (C-2), 26.6 and 26.5 [C(CH3)2], 25.7 (C-3), 24.7
(C-4), 22.4 (CH3CO), 17.9 (4 × C, C-6I, C-6II, C-6III, C-6IV).
found: 741.3781.
Anal. Calcd for C40H53NO9S: C, 66.37; H, 7.38. Found: C, 66.20; H,
7.39.
Methyl 2,4-Di-O-benzyl-3-O-[3-O-benzyl-4,6-dideoxy-4-(3-O-
acetyl-3-methylbutanamido)-2-O-methyl-b-D-glucopyranosyl]-
1-thio-a-L-rhamnopyranoside (12)
Ac2O (10 mL, 109 mmol) was added at 0 °C to a mixture of 11 (5.26
g, 7.27 mmol) and 4-dimethylaminopyridine (887 mg, 7.27 mmol)
in anhyd CH2Cl2 (50 mL). The cooling bath was removed and the
mixture was stirred overnight, when the reaction was complete
(TLC, 3:2 hexane–EtOAc). MeOH (10 mL) was added to quench
the reaction, the mixture was concentrated, and the residue was
chromatographed to give 12; yield: 5.38 g (93%); colorless oil.
1H NMR (600 MHz, CDCl3): d = 5.23 (d, J = 9.0 Hz, 1 H, NH),
5.05 (d, J1,2 = 1.4 Hz, 1 H, H-1I), 4.97–4.58 (m, 7 H, H-1II and
CH2Ph), 4.01 (dd, J2,3 = 3.2 Hz, J3,4 = 9.5 Hz, 1 H, H-3I), 3.98 (m, 1
H, H-5I), 3.95 (dd, J1,2 = 1.5 Hz, J2,3 = 3.2 Hz, 1 H, H-2I), 3.70–3.63
(m, 5 H, H-4I, H-4II and OCH3), 3.39 (dd, J2,3 = 9.0 Hz, J3,4 = 10.2
Hz, 1 H, H-3II), 3.30 (m, 1 H, H-5II), 3.19 (dd, J1,2 = 7.8 Hz,
J2,3 = 9.0 Hz, 1 H, H-2II), 2.60 (ABq, J = 13.8 Hz, 2 H, H-2¢), 2.05
(s, 3 H, SCH3), 1.91 (s, 3 H, CH3CO), 1.51 (s, 3 H, CH3), 1.50 (s, 3
H, CH3), 1.36 (d, J5,6 = 6.3 Hz, 3 H, H-6I), 1.16 (d, J5,6 = 5.6 Hz, 3
H, H-6II).
MS (TOF): m/z = 1533.6 [M + NH4]+, 1538.6 [M + Na]+.
Anal. Calcd for C88H109NO21: C, 69.68; H, 7.24; N, 0.92. Found: C,
69.42; H, 7.38; N, 1.07.
5-Methoxycarbonylpentyl 4-(3-O-Acetyl-3-methylbutanami-
do)-4,6-dideoxy-2-O-methyl-b-D-glucopyranosyl-(1→3)-a-L-
rhamnopyranosyl-(1→3)-a-L-rhamnopyranosyl-(1→2)-a-L-
rhamnopyranoside (14)
A mixture of compound 13 (7.38 g, 4.91 mmol) and 5% Pd/C cata-
lyst (4.0 g) in 5:1 MeOH–EtOAc (300 mL) was stirred in a H2 at-
mosphere at r.t. for 24 h. TLC (6:4:1 CH2Cl2–acetone–MeOH)
showed that the reaction was complete. After filtration through a
Celite pad and concentration of the filtrate, the residue was chro-
matographed to give 14; yield: 3.62 g (85%); colorless oil.
1H NMR (600 MHz, CD3OD): d = 5.06 (d, J1,2 = 1.6 Hz, 1 H, H-
1III), 4.91 (d, J1,2 = 1.7 Hz, 1 H, H-1II), 4.78 (d, J1,2 = 1.5 Hz, 1 H, H-
1I), 4.62 (d, J1,2 = 7.8 Hz, 1 H, H-1IV), 4.18 (dd, J1,2 = 1.8 Hz,
Synthesis 2009, No. 4, 545–550 © Thieme Stuttgart · New York