PAPER
DEPBT Prevents Racemization in Kyotorphin Synthesis
E
electrospray ionization (ESI) on a Bruker Micro Q-Tof instrument
using a hybrid quadrupole time-of-flight mass spectrometer. Ana-
lytical TLC was performed on precoated TLC plates, silica gel 60
F254 (Merck). The spots on the TLC plates were visualized with
UV/visible light (254 nm) and/or with a solution of KMnO4 (1.5
g/100 mL H2O). HPLC analyses were carried out using a Dionex
P680 instrument. Separations were achieved on an analytical C18
Kromasil reversed phase column (4.6 mm × 40 mm; 3.5 μm particle
size). The compounds were eluted using a linear gradient of 0–
100% MeCN in 0.1% TFA at flow rate of 1.0 mL/min. The absor-
bance was measured at 220 nm. The HPLC retention time of each
compound was determined when the peak was at its maximum
height.
J = 8.5 Hz, 2 H, CHaryl), 7.15 (d, J = 8.1 Hz, 2 H, CHaryl), 8.21 (d,
J = 8.4 Hz, 1 H, NH), 12.63 (br, 1 H, OH).
13C NMR (100 MHz, DMSO-d6): δ = 18.7 (q), 22.2 (q, 2 C), 28.5
(q, 3 C), 29.6 (d), 36.1 (t), 44.2 (t), 44.3 (d), 53.2 (d), 77.6 (s), 123.4
(d, 2 C), 127.1 (d, 2 C), 128.6 (d, 2 C), 129.7 (d, 2 C), 132.3 (s),
139.0 (s), 139.1 (s), 153.4 (s), 173.0 (s), 173.2 (s).
HRMS (ESI): m/z calcd for C26H35NO4 + Na [M + Na]+: 448.2458;
found: 448.2476; m/z calcd for C26H36NO4 [M + H]+: 426.2639;
found: 426.2653.
Ibu-Tyr(t-Bu)-Arg-NH2 (4)
To a solution of compound 3 (340 mg, 0.8 mmol) in DMF (4 mL)
was added DIPEA (0.43 mL, 2.5 mmol) and the resulting mixture
was allowed to stir for 0.5 h at 0 °C. Next, DEPBT (264 mg, 0.88
mmol) and H-Arg-NH2·2HCl (197 mg, 0.8 mmol) were added suc-
cessively. The resulting reaction mixture was stirred 1 h at 0 °C and
the stirring was continued at r.t. for another hour. Upon completion
of the reaction (HPLC monitoring), the reaction mixture was diluted
with EtOAc (15 mL). The resulting solution was washed with aq 1
M HCl (3 × 7 mL), sat. aq NaHCO3 (3 × 7 mL), and brine (10 mL).
The organic layer was dried (MgSO4), filtered, and concentrated in
vacuo to obtain compound 4; yield: 353 mg (76%); colorless solid;
mp 122–124 °C; HPLC: tR = 7.96 min, 98.0% pure.
Methyl (S)-2-[(S)-2-(4-Isobutylphenyl)propanamido]-3-(4-tert-
butoxyphenyl)propanoate (2)
To a solution of (S)-ibuprofen (206 mg, 1 mmol) in DMF (4 mL)
was added 0.33 mL (2 mmol) of NMM, and the resulting mixture
was allowed to stir for 0.5 h at r.t. Next, BOP (442 mg, 1.1 mmol)
and H-Tyr(t-Bu)-OMe·HCl (288 mg, 1 mmol) were added succes-
sively. The resulting reaction mixture was stirred overnight at r.t.
Upon completion of the reaction (TLC, eluent: n-hexane–EtOAc,
1:1), the reaction mixture was diluted with EtOAc (15 mL). The re-
sulting solution was washed with sat. aq NaHCO3 (3 × 7 mL), H2O
(10 mL), 1 M aq KHSO4 (3 × 7 mL), and brine (10 mL). The organic
layer was dried (MgSO4), filtered, and concentrated in vacuo. The
resulting residue was purified by SiO2 flash chromatography (n-
hexane–EtOAc, 10:1 to 5:1) to afford compound 2; yield: 417 mg
(95%); colorless oil; Rf = 0.41 (n-hexane–EtOAc, 1:1); HPLC: tR =
10.16 min; 99.0% pure.
1H NMR (400 MHz, DMSO-d6): δ = 0.84 [d, J = 6.6 Hz, 6 H,
CH(CH3)2], 1.10 (d, J = 7.0 Hz, 3 H, CH3-βibuprofen), 1.25 [s, 9 H,
C(CH3)3], 1.35–1.55 (m, 3 H of CH2CH2arginine), 1.61–1.66 (m, 1 H
of CH2CH2arginine), 1.78 [nonet, J = 6.7 Hz, 1 H, CH(CH3)2], 2.37 (d,
J = 7.0 Hz, 2 H, ArCH2ibuprofen), 2.72 (dd, J = 13.9 Hz, J′ = 9.9 Hz, 1
H of the CH2-βtyrosine), 2.99–3.08 (m, 3 H, CH2NH and 1 H of the
CH2-βtyrosine), 3.59 (q, J = 7.0 Hz, 1 H, CH-αibuprofen), 4.14 (q, J = 7.8
Hz, 1 H, CH-αarginine), 4.48–4.54 (m, 1 H, CH-αtyrosine), 6.83 (d,
J = 8.4 Hz, 2 H, CHaryl), 7.00–7.06 (m, 2 H, D2O exch. and 2 H,
CHaryl), 7.08 (br, 2 H, D2O exch.), 7.13–7.16 (m, 4 H, CHaryl), 7.35
(br, 1 H, D2O exch.), 7.68 (t, J = 5.2 Hz, 1 H, NH, D2O exch.), 8.03
(d, J = 8.0 Hz, 1 H, NH, D2O exch.), 8.21 (d, J = 8.2 Hz, 1 H, NH,
D2O exch.).
13C NMR (100 MHz, DMSO-d6): δ = 18.5 (q), 22.2 (q, 2 C), 24.9
(t), 28.5 (q, 3 C), 29.2 (t), 29.6 (d), 36.8 (t), 39.9 (t), 44.2 (t), 44.4
(d), 51.9 (d), 53.9 (d), 77.5 (s), 123.3 (d, 2 C), 127.1 (d, 2 C), 128.6
(d, 2 C), 129.8 (d, 2 C), 132.7 (s), 139.0 (s), 139.1 (s), 153.3 (s),
156.9 (s), 171.1 (s), 173.1 (s), 173.3 (s).
HRMS (ESI): m/z calcd for C32H49N6O4 [M + H]+: 581.3810; found:
581.3811.
1H NMR (400 MHz, CDCl3): δ = 0.90 [d, J = 6.4 Hz, 6 H,
CH(CH3)2], 1.32 [s, 9 H, C(CH3)3], 1.48 (d, J = 7.2 Hz, 3 H, CH3-
βibuprofen), 1.85 [nonet, J = 6.7 Hz, 1 H, CH(CH3)2], 2.45 (d,
J = 7.2 Hz, 2 H, ArCH2ibuprofen), 2.94 (dd, J = 13.9 Hz, J′ = 6.2 Hz, 1
H of the CH2-βtyrosine), 3.02 (dd, J = 13.9 Hz, J′ = 5.7 Hz, 1 H of the
CH2-βtyrosine), 3.52 (q, J = 7.2 Hz, 1 H, CH-αibuprofen), 3.64 (s, 3 H,
OCH3), 7.75 (app q, J = 5.9 Hz, 1 H, CH-αtyrosine), 5.76 (d, J = 7.7
Hz, 1 H, NH), 6.79–6.84 (m, 4 H, CHaryl), 7.09 (d, J = 8.1 Hz, 2 H,
CHaryl), 7.14 (d, J = 8.1 Hz, 2 H, CHaryl).
13C NMR (100 MHz, CDCl3): δ = 18.1 (q), 22.3 (q, 2 C), 28.8 (q, 3
C), 30.1 (d), 37.0 (t), 45.0 (t), 46.6 (d), 52.1 (q), 53.1 (d), 78.3 (s),
124.1 (d, 2 C), 127.3 (d, 2 C), 129.52 (d, 2 C), 129.53 (d, 2 C), 130.5
(s), 137.6 (s), 140.7 (s), 154.3 (s), 171.8 (s), 174.0 (s).
HRMS (ESI): m/z calcd for C22H37N3O6 + Na [M + Na]+: 462.2575;
found: 462.2577; m/z calcd for C22H38N3O6 [M + H]+: 440.2755;
found: 440.2739.
Ibu-Tyr-Arg-NH2 (1)
Compound 4 (320 mg, 0.55 mmol) was dissolved in 4 M HCl in 1,4-
dioxane (15 mL) and stirred for 1 h at r.t. After completion of the
reaction (HPLC monitoring), the solvent was evaporated in vacuo
and the resulting residue was triturated with Et2O (15 mL), filtered,
washed with Et2O (2 × 10 mL) and n-pentane (2 × 10 mL), and dried
to obtain compound 1; yield: 230 mg (80%); colorless solid; mp
140–142 °C; HPLC: tR = 7.32 min, 99.9% pure.
(S)-2-[(S)-2-(4-Isobutylphenyl)propanamido]-3-(4-tert-butoxy-
phenyl)propanoic Acid (3)
To a solution of compound 2 (395 mg, 0.9 mmol) in THF–MeOH–
H2O (1:2:2, 7 mL) was added LiOH·H2O (94.5 mg (2.25 mmol) and
the resulting mixture was stirred for 1 h at r.t. Upon completion of
the reaction (TLC, eluent: n-hexane–EtOAc, 1:1), the pH of the so-
lution was adjusted to 2 with the addition of aq 1 M HCl. The result-
ing solution was extracted with CH2Cl2 (3 × 10 mL). The combined
organic layers were dried (MgSO4), filtered, and concentrated in
vacuo. The crude material was triturated with n-pentane (4 mL), fil-
tered, washed with n-pentane (1 mL), and dried to obtain compound
3; yield: 375 mg (98%); colorless solid; mp 57–58 °C; Rf = 0.18
(CHCl3–MeOH–NH3, 12:2:0.2); HPLC: tR = 9.41 min, 99.9% pure.
1H NMR (400 MHz, DMSO-d6): δ = 0.84 [d, J = 6.8 Hz, 6 H,
CH(CH3)2], 1.15 (d, J = 7.2 Hz, 3 H, CH3-βibuprofen), 1.34–1.52 (m,
3 H of the CH2CH2arginine), 1.60–1.68 (m, 1 H of the CH2CH2arginine),
1.78 [nonet, J = 6.7 Hz, 1 H, CH(CH3)2], 2.37 (d, J = 7.1 Hz, 2 H,
ArCH2ibuprofen), 2.65 (dd, J = 13.8 Hz, J′ = 9.5 Hz, 1 H of the CH2-
βtyrosine), 2.91 (dd, J = 13.8 Hz, J′ = 4.3 Hz, 1 H of the CH2-βtyrosine),
3.03 (app q, J = 6.5 Hz, 2 H, CH2NH), 3.60 (q, J = 6.9 Hz, 1 H, CH-
αibuprofen), 4.15 (app q, J = 7.6 Hz, 1 H, CH-αarginine), 4.41–4.46 (m, 1
H, CH-αtyrosine), 6.63 (d, J = 8.4 Hz, 2 H, CHaryl), 7.0 (d, J = 8.4 Hz,
2 H, CHaryl), 7.02 (d, J = 8.1 Hz, 2 H, CHaryl), 7.08 (br, 1 H, D2O
exch.), 7.13 (d, J = 8.1 Hz, 2 H, CHaryl), 7.27 (br, 2 H, D2O exch.),
7.61 (t, J = 5.5 Hz, 1 H, NH, D2O exch.), 7.95 (d, J = 8.0 Hz, 1 H,
NH, D2O exch.), 8.07 (d, J = 8.3 Hz, 1 H, NH, D2O exch.), 9.20 (br,
1 H, D2O exch.).
1H NMR (400 MHz, DMSO-d6): δ = 0.84 [d, J = 6.6 Hz, 6 H,
CH(CH3)2], 1.14 (d, J = 7.0 Hz, 3 H, CH3-βibuprofen), 1.26 [s, 9 H,
C(CH3)3], 1.79 [nonet, J = 6.7 Hz, 1 H, CH(CH3)2], 2.39 (d, J = 7.1
Hz, 2 H, ArCH2ibuprofen), 2.80 (dd, J = 13.7 Hz, J′ = 9.9 Hz, 1 H of
the CH2-βtyrosine), 3.02 (dd, J = 13.8 Hz, J′ = 4.7 Hz, 1 H of the CH2-
β
tyrosine), 3.58 (q, J = 7.0 Hz, 1 H, CH-αibuprofen), 4.39 (ddd,
J = 9.7 Hz, J′ = 8.5 Hz, J′′ = 4.7 Hz, 1 H, CH-αtyrosine), 6.84 (d, J =
8.5 Hz, 2 H, CHaryl), 7.04 (d, J = 8.1 Hz, 2 H, CHaryl), 7.08 (d,
© Georg Thieme Verlag Stuttgart · New York
Synthesis 2014, 46, A–F