N. Özbek et al. / Journal of Molecular Structure 938 (2009) 48–53
49
the temperature was maintained between 268 and 273 K. The
2.6. Determination of MIC for the bacteria
mixture was stirred for 24 h (completion of the reaction was
monitored by TLC), then solvent was evaporated. The colorless
crude compound was purified in THF/n-hexane by column chro-
matography then the product was crystallized from THF/n-hexane
mixture (3:1). Yield 65%; mp: 115–117 °C. EI-MS (70 eV) m/z:
248.2 (2 M+), 249.1 (2 M + 1)+, Elemental analysis: Calcd for
(C2H8SO2N2): C, 19.35; H, 6.45; N, 22.50; S, 22.80. Found: C,
19.45; H, 6.34; N, 22.45; S, 22.61.
E. coli ATCC 11230, P. aeruginosa ATCC 28753, S. enterititis ATCC
40376, S. aureus ATCC 25923, B. cereus RSKK 863 cultures were ob-
tained from Gazi University, Biology Department and Refik Saydam
Hygiene Center Culture Collection. Bacterial strains were cultured
overnight at 310 K in Nutrient Broth. These stock cultures were
stored in the dark at 277 K during the survey.
The antibacterial activity of the compounds was examined by
determination the minimum inhibitory concentration (MIC) in
accordance with CLNS methodology (NCCLS) [17,18]. All tests were
performed in Nutrient Broth supplemented with dimethyl sulfox-
ide at a final concentration of 10% (v/v) to enhance their solubility.
Bacterial strains were cultured overnight at 310 K in Nutrient
Broth. Briefly, test strains were suspended in Nutrient Broth by
adjusting to 0.5 McFarland. The test compounds dissolved in di-
methyl sulfoxide (DMSO) were first diluted to the highest concen-
2.3. Synthesis of salmsmh
Ethanolic solution of methanesulfonic acid 1-methylhydrazide
(0.65 g, 5.24 mmol) was added dropwise to an ethanolic solution
of salicylaldehyde (0.65 mL g, 6.25 mmol), maintaining the tem-
perature at about 268 K. Then, the mixture was stirred for 5–
8 h at room temperature. The precipitated product was crystal-
lized from ethanol/n-hexane (3:1) mixture. The yellow crystal-
line solid was dried in vacuo and stored at ethanol/n-hexane
tration (1000
dilutions were made in a concentration range from 15.6 to
1000
g mLꢀ1 in 10 mL sterile test tubes containing nutrient broth.
l
g mLꢀ1) to be tested, and then serial twofold
vapour. Yield 60%, mp 110–111 °C. IR (KBr) cmꢀ1
:
1622
l
t
(C@N), 1268 (CAO), 1314 as(SO2), 1152
t
t
t
s(SO2); 1H NMR
MIC values of compounds bacterial strains were determined based
(d6-DMSO) d: 2.31 ppm(t, 3H, CH3), 5.02 ppm (s, 3H, NACH3),
8,69 ppm (s, 1H, N@CH), 11.35 ppm (s, 1H, OH), 6.94–7.36 ppm
(m, ArH); 13C NMR(d6-DMSO) d: 40.22 ppm (CH3), 40.01 ppm
(N@CH3), 164.90 ppm (N@CH); 117.25–132.55 ppm (ArC); EI-
MS (70 eV) m/z: 228 (M+, 11.4%, M + 1, 3.7%); Anal. Calcd. for
C9H12SO3N2: C, 47.4; H, 5.30; N, 12.30; S, 14.03. Found: C,
47.6; H, 5.34; N, 12.37; S, 13.98.
on a micro-well dilution method with some modifications. Then
96-well plates were prepared by dispensing into each well 95
of nutrient broth and 5 L of the inoculums. 100 L from test com-
pounds initially prepared at the concentration of 1000
g mLꢀ1
was added into the first wells. Then, 100 L from their serial dilu-
lL
l
l
l
l
tions was transferred into 13 consecutive wells. The test com-
pounds in this study were screened two times against each
micro organism. The MIC values were determined from visual
examinations as beings the lowest concentration of the extracts
in the wells with no bacterial growth [19].
2.4. Synthesis of nafmsmh
Ethanolic solution of methanesulfonic acid 1-methylhydrazide
(0.32 g, 2.58 mmol) was added dropwise to an ethanolic solution
of 2-hydroxy-1-naphthaldehyde (0.66 g, 3.8 mmol), maintaining
the temperature at about 268 K. Then, the mixture was stirred
for 5 h at room temperature. The precipitated product was crystal-
lized from ethanol/n-hexane (4:1) mixture. The yellow crystalline
solid was dried in vacuo and stored at ethanol/n-hexane vapour.
2.7. Disc diffusion method
Bacterial susceptibility testing was performed by the disc diffu-
sion method according to the guidelines of Clinical and Laboratory
Standards Institute (CLSI) [20]. The sterilized (autoclaved at 393 K
for 30 min), liquefied Mueller Hinton agar (313–323 K) was inocu-
lated with the suspension of the micro organism (matched to 0.5
McFarland) and poured into a Petri dish to give a depth of 3–
4 mm. The paper discs impregnated with the test compounds
Yield 65%; mp: 132–133 °C. IR (KBr) cmꢀ1: 1621
(CAO), 1320 as(SO2), 1165
s(SO2); 1H NMR (d6-DMSO) d:
t(C@N), 1240 t
t
t
3.13 ppm (t, 3H, CH3), 3,45 ppm (s, 3H, NACH3), 8,80 ppm (s, 1H,
N@CH), 11.85 ppm (s, 1H, OH), 7.23–8.58 ppm (m, ArH); 13C
NMR (d6-DMSO) d: 35.69 ppm (CH3), 33.27 ppm (N@CH3),
157,61 ppm (N@CH); 109.68–144.08 ppm (ArC); EI-MS (70 eV)
m/z: 278 (M+, 10.1%, M + 1, 5.7%); Anal. Calcd. for C13H14SO3N2:
C, 56.12; H, 5.03; N, 10.07; S, 11.51. Found: C, 56.16; H, 5.06; N,
10.04; S, 11.59.
(60 lg) were placed on the solidified medium. Discs were placed
on agar plates and the cultures were incubated at 310 K for 24 h
for bacteria. Inhibition zones formed on the medium were evalu-
ated in mm. Ampicillin was chosen as a standard in antibacterial
activity measurements (positive control). DMSO poured disc was
used as negative control.
2.5. Theoretical calculations
3. Results and discussion
An extensive search for low energy conformations on the po-
tential energy surface (PES) of (msmh) was carried out by using a
systematic search with DFT/B3LYP/6-311G(d) levels. Vibration
frequencies calculated ascertain the structure was characterized
to be the stable structure (no imaginary frequencies). For the
NMR calculations, the optimized geometry at DFT/B3LYP/
6-311++G(2d, 2p) level in gas phase was used. 1H and 13C NMR
chemical shifts were calculated by GIAO method at DFT/B3LYP/
6-311++G(2d, 2p) level. The 1H and 13C shieldings were con-
verted into the predicted chemical shifts using TMS values, cal-
culated at the same level of theory. After being optimized at
DFT/B3LYP/6-31G(d) level, vibrational wavenumbers of the most
stable conformer were calculated at the same level. All calcula-
tions were performed on a Pentium IV computer with the de-
fault convergence criteria and using Gaussian 03 software
package [16].
3.1. Structure analysis
The numbering scheme and molecular geometry of msmh are
presented in Fig. 1. One-dimensional potential energy scans were
performed
for
three
torsion
angles-s1 O2ASAN1AC1,
s2 C2ASAN1AC1 and s3 C2ASAN1AN2 in the full range of 0–360°,
starting with the eclipsed conformation and increasing of 30° at
DFT/B3LYP/6-311G(d) (Figs. 2–4), to determine the all the possible
conformations in vacuo. As seen in Figs. 2–4, the energy profiles of
s1 shows local minima at about 150°, global minima at 210°, local
maxima at about 180°, 300° and global maxima at 60°. Second scan
for s2 shows two local minima at 90° and 270°, global minima at
330°, local maxima at 30°, 300° and global maxima at 180°. Final scan
for
s3 shows two local minima at about 120° and 270°, global minima
at about 360°, two local maxima at 60° and 300°, global maxima at