DNA ENCAPSULATION IN A SELF-ASSEMBLED NEOGLYCOPEPTIDE
Synthesis and Characterization
evaporation as hygroscopic solid (0.04 g, 26%). Rf = 0.1 (30%
◦
25
methanol/dichloromethane). [α]D = +198.5 (c 0.2, CH3OH); 1H
NMR (500 MHz, DMS0-d6, 25 ◦C, TMS) δ (ppm) 1.19–1.27 (m, 3H),
1.47–1.84(m,13H),2.08–2.11(m,2H),2.35–2.43(m,5H),2.71–2.77
(m, 10H), 2.99(bs, 6H), 3.57–3.69 (m, 13H), 4.21–4.26, 4.36, 4.44,
4.60–4.69, 4.80, 4.96 (m, 3H), 5.12–5.14 (bs, 2H), 5.56–5.58 (d,
J = 8.05 Hz, 2H), 7.11–7.30 (m, 10H), 7.76–7.89 (m, 2H), 8.08–8.12
(m, 2H); 13C NMR (125 MHz, DMS0-d6, 25 ◦C, TMS) δ (ppm) 23.41,
24.99, 25.83, 27.24, 27.49, 29.15, 29.47, 31.41, 33.85, 36.27, 37.34,
38.51, 39.59, 39.92, 40.24, 46.90, 47.30, 48.03, 49.12, 52.39, 59.16,
59.87, 61.69, 67.75, 72.03, 72.32, 74.82, 85.70, 126.78, 128.46,
129.91, 157.21, 169.71, 171.07, and 173.69; m/z (HRMS) Calculated
[M+Na+] 1157.4399, Found 1157. 4395.
N2,N6-Bis[(2, 3, 4, 6-tetra-O-acetyl-α-D-mannopyranosyl) thio] pro-
pionyl]-lysine N-hydroxysuccinimide ester
N-hydroxysuccinimide (0.13 g, 1.13 mmol) and compound 1
[20] (1.0 g, 1.01 mmol), were taken in a two-necked round
bottom flask and dissolved in dry dichloromethane (20 ml). This
resulting solution was stirred in ice-cold water under nitrogen
atmosphere for 10 min. DCC (0.25 g, 1.2 mmol) was dissolved in
dry dichloromethane (5 ml) and added to the reaction mixture in
small batches. The stirring was continued for 1 h in ice-cold water
followed at room temperature over night. The white precipitate
of N,Nꢁ-dicyclohexylurea was filtered off and the filtrate was
washed with 10% sodium-bicarbonate solution (2 × 10 ml) and
brine solution (2 × 10 ml). The combined organic layer was dried
over anhydrous sodium sulfate, followed by the removal of the
solvent by evaporation to yield product (0.56 g, 52%). Rf = 0.45
(10% methanol/dichloromethane). The product was used without
further purification in next step.
Atomic Force Microscopy
Atomic force microscopy (AFM) was carried out in air using an
Agilent Technologies AFM (5500 AFM/SPM) operating under the
Acoustic AC mode (AAC). The sample was mounted on the XY
stage of the AFM and the integral video camera (NAVITAR, Model
N9451A-USO6310233 with the Fiber-light source, MI-150 high
intensity illuminator from Dolan-Jenner Industries) was used to
locate the regions of interest. Silicon nitride cantilevers with
resonant frequency of 150 kHz were used. The average dimension
thickness, width and length of cantilever were approximately
2.0, 51 and 446 µm, respectively. The scanner model N9524A-
USO7480132.xml/N9520A-USO7480152.xml was calibrated and
used for imaging. The images were taken in air at room
temperature, with the scan speed of 1.5–2.2 lines/s. Data
acquisition and analysis were carried out using PicoView 1.4
and Pico Image Basic software, respectively. Fresh solutions of
3 (1 mM) in water were prepared and incubated at 37 ◦C for 12 h,
prior to microscopic investigation. A 10 µl aliquot of the solution
was transferred onto freshly cleaved mica surface. The sample-
coated mica was dried for 30 min under lamp, and finally vacuum
was applied for 30 min followed by AFM imaging.
N2,N6-Bis[(2, 3, 4, 6-tetra-O-acetyl-α-D-mannopyranosyl) thio] pro-
pionyl]-Lys-Pro-Phe-Phe-Pro-OMe (2)
A solution of N-hydroxysuccinimide ester of 1 (0.5 g, 0.46 mmol)
in dry dichloromethane (∼15 ml) was added to TFA salt of H-Pro-
Phe-Phe-Pro-OMe [21] (0.22 g, 0.34 mmol) dissolved in dry DMF
(∼5 ml) and stirred. TEA (78 µl, 0.56 mM) was added to the reaction
mixtureinadropwisefashionandtheresultingsolutionwasstirred
for ∼12 h under nitrogen atmosphere. The reaction mixture was
evaporated to dryness and the residue obtained was dissolved in
dichloromethane (15 ml) and the organic layer was washed with
1 N HCl (2 × 10 ml) and saturated sodium-bicarbonate solution
(2 ×10 ml). The combined organic layer was dried over anhydrous
sodium sulfate and the solvent was evaporated to yield a yellow oil
whichwaspurifiedusing silicagelcolumnchromatography(5–6%
CH3OH gradient in CH2Cl2) to give final product as hygroscopic
solid (0.28 g, 40.7%). Rf = 0.3 (5% methanol/dichloromethane).
1H NMR (500 MHz, CDCl3, 25 ◦C, TMS) δ (ppm) 1.29–1.36 (q, 2H,
J = 12.25 Hz, 24.25 Hz), 1.57–1.60 (d, 2H, J = 12.65), 1.70–1.73 (d,
6H, J = 13.00), 1.90–2.15 (m, 28H), 2.49–2.57 (m, 2H), 2.89–2.94
(m, 6H), 3.22–3.26 (m, 2H), 3.46–3.46 (m, 6H), 3.64–3.67 (m, 2H),
3.72(s, 3H), 4.06–4.12(m,3H), 4.29–4.32(m, 7H), 5.17–5.22(m, 2H),
5.29 (bs, 7H), 6.94–6.96 (m, 2H), 71.3–7.25 (m, 10H), 8.10–8.11 (m,
2H); 13C NMR (125 MHz, CDCl3, 25 ◦C, TMS) δ (ppm) 15.09, 20.40,
20.88, 21.06, 24.61, 25.30, 29.79, 33.07, 50.15, 52.35, 62.52, 65.89,
66.32, 69.17, 69.61, 126.67, 126.80, 128.46, 129.75, 169.83, 170.00,
and 171.00. m/z (HRMS) Calculated [M+Na+ ] 1507.5400, Found
1507.5249.
Scanning Electron Microscopy
A 20 µl aliquot of 3 dissolved in water (1 mM) and incubated
at 37 ◦C for 12 h was dried under lamp on copper stubs and
subsequently coated with gold. Scanning electron microscopic
images were acquired on FEI QUANTA 200 microscope, equipped
with a tungsten filament gun, operating at WD 10.6 mm and 20 kV.
Optical Microscopy
A 20 µl aliquot of the 3 (1 mM) dissolved in water and incubated at
37 ◦C for 16 h was dried under lamp on glass slide and visualized
without filter in (Leica DM2500M) microscope under 100× lens.
N2,N6-Bis[(α-D-mannopyranosyl)thio]propionyl]-Lys-Pro-Phe-Phe-
Pro–OH (3)
Fluorescence Microscopy
To a solution of compound 2 (0.2 g, 0.13 mmol) in methanol
(10 ml) sodium methoxide (0.09 g, 1.6 mmol) was added and the
reaction mixture was stirred for 1 h at room temperature under
nitrogen atmosphere. The resulting solution was neutralized on a
Amberliteresincolumn,whichwasactivatedpriortouseby2NHCl,
followed by solvent evaporation to yield deprotected compound
2a. It was further dissolved in minimum volume of methanol
and 0.14 ml 1 N NaOH was added. The resulting solution was
stirred for 12 h, followed by neutralization by activated Amberlite
resin. The deprotected compound 3 was obtained upon solvent
Compound 3 was dissolved in rhodamine B aqueous solution
(1 µM) to a final concentration of 1.0 mM and incubated for 16 h
at 37 ◦C. After 16 h, 20 µl of the solution was loaded on the glass
slide and dried under lamp. Dye stained structures were examined
under a fluorescent microscope (Leica DM2500M), provisioned
witharhodaminefilter(absorption540 nm/emission625 nm). This
filterallowsoptimizedvisualizationofrhodamine-treated(positive
resolution)comparedwithuntreated(negativeresolution)vesicles
that are virtually invisible to this light.
c
J. Pept. Sci. 2011; 17: 148–153 Copyright ꢀ 2010 European Peptide Society and John Wiley & Sons, Ltd. wileyonlinelibrary.com/journal/psc