Journal of Medicinal Chemistry
ARTICLE
reaction mixture was heated to reflux overnight, and then, using a rotary
evaporator, the excess EtOH was removed. The crude material was
dissolved in trifluoroacetic acid (3 mL, 40 mmol) and irradiated with
microwave at 150 °C for 30 min. The excess TFA was removed in vacuo.
The crude material was purified over silica gel eluting with 0ꢁ10%
MeOH (2 M NH3) in DCM to afford the title compound 23c (25 mg,
29%). 1H NMR (400 MHz, DMSO-d6) δ 12.5 (s, 1H), 11.1 (s, 1H), 7.7
(s, 1H), 7.5 (t, J = 7.5 Hz, 1H), 6.8 (d, J = 8.3 Hz, 1H), 6.7 (d, J = 7.5 Hz,
1H), 3.0 (m, 4H), 2.4 (s, 3H), 2.0 (m, 2H). MS (ES+) m/e 298 (M + H)+.
HRMS calcd for (M + H)+: C15H16N5S+ 298.11209; found 278.10360.
(4,6-Dimethyl-pyridin-2-yl)-(4,5,6,8-tetrahydro-3-thia-1,7,8-
triaza-cyclopenta[e]azulen-2-yl)-amine (23d). The title com-
pound was prepared according to the method described for compound
23c (3 mg, 4%). 1H NMR (400 MHz, DMSO-d6) δ 11.0 (s, 1H), 7.68 (s,
1H), 6.63 (s, 1H), 6.60 (s, 1H), 3.01ꢁ2.92 (m, 4H), 2.39 (s, 3H), 2.22
(s, 3H), 2.03ꢁ1.94 (m, 2H). MS (ES+) m/e 312 (M + H)+. HRMS calcd
for (M + H)+: C15H16N5S + 298.11209; found 278.10360.
[6-(4,5,6,8-Tetrahydro-3-thia-1,7,8-triaza-cyclopenta[e]-
azulen-2-ylamino)-pyridin-2-yl]-methanol (23l). The title com-
pound was prepared according to the method described for compound
23q (8 mg, 10%). 1H NMR (400 MHz, DMSO-d6) δ 12.5 (br, 1H), 11.1
(s, 1H), 7.71ꢁ7.63 (m, 1H), 6.97 (d, J = 7.0 Hz, 1H), 6.88 (d, J = 8.1 Hz,
1H), 5.34 (s, 1H), 4.55 (s, 1H), 3.02ꢁ2.92 (m, 4H), 2.04ꢁ1.94 (m, 2H).
MS (ES+) m/e 314 (M + H)+. HRMS calcd for (M + H)+: C15H16N5OS+
342.10192; found 342.10217.
[6-(2-Methoxy-ethoxy)-pyridin-2-yl]-(4,5,6,8-tetrahydro-3-
thia-1,7,8-triaza-cyclopenta[e]azulen-2-yl)-amine (23m). The
mixture of (6-fluoro-pyridin-2-yl)-[8-(4-methoxy-benzyl)-4,5,6,8-tetrahydro-
3-thia-1,7,8-triaza-cyclopenta[e]azulen-2-yl]-amine (50 mg, 0.052 mmol)
and NaOH (14 mg, 0.36 mmol) in 2-methoxyethanol (0.5 mL) was
microwaved at 150 °C for 30 min. The mixture was diluted with DCM
(20 mL). The organic layer was washed with brine and concentrated to
give a crude intermediate, which was dissolved in TFA (2 mL). The
resulting reaction mixture was microwaved at 130 °C for 30 min and
concentrated. The residue was dissolved in i-PrOH/CHCl3 (1:3. 30 mL)
and quenched with saturated aqueous NaHCO3. The combined organic
layers were concentrated, and the resulting residue was purified on a
reversed-phase liquid chromatography/mass spectrometry (RP-HPLC/
MS) purification system (Gradient: acetonitrile in water, 20ꢁ95% in 3.3
min with a cycle time of 5 min. A shallow gradient between 25 and 50% of
acetonitrile was used between 0.6 andd 3.0 min to separate close-eluting
impurities. Flow rate: 100 mL/min. Mobile phase additive: 39 mM of
ammonium acetate. Column: Inertsil C8, 30 mm ꢀ 50 mm, 5 μm particle
size) to afford the title compound (5 mg, 9% over 2 steps). The 1H NMR
(400 MHz, DMSO-d6) δ 12.4 (br, 1H), 11.0 (s, 1H), 7.61 (S, 1H), 7.49
(T, J = 7.9 Hz, 1H), 6.50 (d, J = 7.8 Hz, 1H), 6.20 (d, J = 7.9 Hz, 1H),
4.49ꢁ4.44 (m, 2H), 3.67ꢁ3.62 (m, 2H), 3.25 (s, 3H), 2.96ꢁ2.86 (m,
4H), 1.96ꢁ1.87 (m, 2H). MS (ES+) m/e 358 (M + H)+. HRMS calcd for
(M + H)+: C17H20N5O2S+ 358.13322; found 358.13348.
(6-Fluoro-pyridin-2-yl)-(4,5,6,8-tetrahydro-3-thia-1,7,8-triaza-
cyclopenta[e]azulen-2-yl)-amine (23f). The title compound was
prepared according to the method described for compound 23c (5 mg,
6%). 1H NMR (400 MHz, DMSO-d6) δ 12.5 (s, 1H), 11.4 (s, 1H), 7.8
(q, J = 8.0 Hz, 1H), 7.7 (s, 1H), 7.0 (d, J = 8.0 Hz, 1H), 6.6 (dd, J = 8.0,
2.1 Hz, 1H), 3.0 (m, 4H), 2.0 (m, 2H). MS (ES+) m/e 302 (M + H)+.
HRMS calcd for (M + H)+: C16H18N5S + 312.12774; found 312.12770.
(6-Chloro-pyridin-2-yl)-(4,5,6,8-tetrahydro-3-thia-1,7,8-
triaza-cyclopenta[e]azulen-2-yl)-amine (23g). The title com-
pound was prepared according to the method described for compound
23c (5 mg, 5%). 1H NMR (400 MHz, DMSO-d6) δ 12.6 (s, 1H), 11.4 (s,
1H), 7.7 (m, 2H), 7.7 (s, 1H), 7.0 (d, J = 7.8 Hz, 1H), 6.9 (d, J = 7.4 Hz,
1H), 3.0 (m, 4H), 2.0 (m, 2H). MS (ES+) m/e 302 (M + H)+. HRMS
calcd for (M + H)+: C14H13FN5S + 302.08702; found 302.08736.
(5-Fluoro-pyridin-2-yl)-(4,5,6,8-tetrahydro-3-thia-1,7,8-
triaza-cyclopenta[e]azulen-2-yl)-amine (23e). The title com-
pound was prepared according to the method described for compound
23q (6 mg, 10%). 1H NMR (400 MHz, DMSO-d6) δ 12.5 (br, 1H), 11.2
(s, 1H), 8.24 (d, J = 3.0 Hz, 1H), 7.72ꢁ7.64 (m, 2H), 7.13ꢁ7.07 (m, 1H),
3.02ꢁ2.91 (m, 4H), 2.04ꢁ1.93 (m, 2H). MS (ES+) m/e 302 (M + H)+.
HRMS calcd for (M + H)+: C14H13FN5S + 302.08702; found 302.08736.
(6-Methoxy-pyridin-2-yl)-(4,5,6,8-tetrahydro-3-thia-1,7,8-
triaza-cyclopenta[e]azulen-2-yl)-amine (23h). The title com-
pound was prepared according to the method described for compound
N,N-Dimethyl-N0-(4,5,6,8-tetrahydro-3-thia-1,7,8-triaza-
cyclopenta[e]azulen-2-yl)-pyridine-2,6-diamine (23n). The
title compound was prepared according to the method described for
compound 23q (23 mg, 29%). 1H NMR (400 MHz, DMSO-d6) δ 12.4
(br, 1H), 10.7 (s, 1H), 7.59 (s, 1H), 7.29 (t, J = 8.0 Hz, 1H), 6.13 (d, J =
7.7 Hz, 1H), 5.97 (d, J = 8.1 Hz, 1H), 3.03 (s, 6H), 2.93ꢁ2.85 (m, 4H),
1.95ꢁ1.86 (m, 2H). MS (ES+) m/e 327 (M + H)+. HRMS calcd for
(M + H)+: C16H19N6S+ 327.13864; found 327.13912.
N-Ethyl-N0-(4,5,6,8-tetrahydro-3-thia-1,7,8-triaza-cyclopenta-
[e]azulen-2-yl)-pyridine-2,6-diamine (23o). The title compound
was prepared according to the method described for compound 23q (21
1
23q (5 mg, 9%). H NMR (400 MHz, DMSO-d6) δ 11.1 (s, 1H),
7.74ꢁ7.52 (m, 2H), 6.57 (d, J = 7.8 Hz, 1H), 6.27 (d, J = 7.8 Hz, 1H),
4.00 (s, 3H), 3.01ꢁ2.94 (m, 4H), 2.03ꢁ1.95 (m, 2H). MS (ES+) m/e
314 (M + H)+. HRMS calcd for (M + H)+: C15H16N5OS+ 314.10701;
found 314.10631.
(6-Ethoxy-pyridin-2-yl)-(4,5,6,8-tetrahydro-3-thia-1,7,8-
triaza-cyclopenta[e]azulen-2-yl)-amine (23i). The title com-
pound was prepared according to the method described for compound
23q (8 mg, 10%). 1H NMR (400 MHz, DMSO-d6) δ 12.6 (br, 1H), 11.1
(s, 1H), 7.76 (s, 1H), 7.63 (t, J = 7.9 Hz, 1H), 6.64 (d, J = 7.8 Hz, 1H),
6.32 (d, J = 7.8 Hz, 1H), 4.55 (q, J = 7.0 Hz, 2H), 3.10ꢁ3.01 (m, 4H),
2.12ꢁ2.02 (m, 2H), 1.45 (t, J = 7.0 Hz, 3H). MS (ES+) m/e 328 (M +
H)+. HRMS calcd for (M + H)+: C16H18N5OS+ 328.12266; found
328.12323.
1
mg, 26%). H NMR (400 MHz, DMSO-d6) δ 12.5 (br, 1H), 10.7 (s,
1H), 7.66 (s, 1H), 7.22 (t, J = 7.8 Hz, 1H), 6.43 (d, J = 5.5 Hz, 1H), 6.08
(d, J = 7.6 Hz, 1H), 5.93 (d, J = 7.9 Hz, 1H), 3.48ꢁ3.38 (m, 2H),
3.02ꢁ2.89 (m, 4H), 2.03ꢁ1.94 (m, 2H), 1.18 (t, J = 7.1 Hz, 3H). MS
(ES+) m/e 326 (M + H)+; HRMS calcd for (M + H)+: C16H19N6S+
327.13864; found 327.13873.
(6-Pyrrolidin-1-yl-pyridin-2-yl)-(4,5,6,8-tetrahydro-3-thia-
1,7,8-triazacyclopenta[e]azulen-2-yl)-amine (23p). The title
compound was prepared according to the method described for
1
compound 23q (5 mg, 8%). H NMR (400 MHz, DMSO-d6) δ 12.4
(br, 1H), 10.7 (s, 1H), 7.59 (s, 1H), 7.30ꢁ7.23 (m, 1H), 6.07 (d, J = 7.7
Hz, 1H), 5.79 (d, J = 8.1 Hz, 1H), 3.46ꢁ3.37 (m, 4H), 2.93ꢁ2.84 (m,
4H), 1.96ꢁ1.84 (m, 6H). MS (ES+) m/e 353 (M + H)+. HRMS calcd for
(M + H)+: C18H21N6S+ 353.15429; found 353.15444.
(4-Methyl-pyrimidin-2-yl)-(4,5,6,8-tetrahydro-3-thia-1,7,8-
triaza-cyclopenta[e]azulen-2-yl)-amine (23q). The mixture of
18b (60 mg, 18 mmol), 2-chloro-4-methylpyrimidine (23 mg, 18
mmol), Cs2CO3 (120 mg, 0.363 mmol), Pd2(dba)3 (2 mg, 0.002 mmol),
and Xantphos (2 mg, 0.004 mmol) in DMF/THF (1.5 mL/1.5 mL) was
microwaved at 125 °C for 1 h, filtered through the Celite pad, and
concentrated to afford the crude intermediate, [8-(4-methoxy-benzyl)-
6-(4,5,6,8-Tetrahydro-3-thia-1,7,8-triaza-cyclopenta[e]-
azulen-2-ylamino)-pyridine-2-carboxylic Acid Methyl Ester
(23k). The title compound was prepared according to the method
described for compound 23q (5 mg, 8%). 1H NMR (400 MHz, DMSO-d6)
δ 12.4 (br, 1H), 11.3 (s, 1H), 7.77 (dd, J = 8.3, 7.4 Hz, 1H), 7.63 (s, 1H),
7.50 (dd, J = 7.3, 0.6 Hz, 1H), 7.21(d, J = 8.3 Hz, 1H), 3.84 (s, 3H),
2.95ꢁ2.88 (m, 4H), 1.97ꢁ1.89 (m, 2H). MS (ES+) m/e 342 (M + H)+.
+
HRMS calcd for (M + H)+: C16H16N5O2S
342.10217.
342.10192; found
5079
dx.doi.org/10.1021/jm200290z |J. Med. Chem. 2011, 54, 5070–5081