Journal of Medicinal Chemistry
ARTICLE
N-((5-Chloro-8-hydroxyquinolin-7-yl)(thiophen-2-yl)methyl)prop-
1
1 H), 8.97 (dd, J = 4.1 and 1.6 Hz, 1 H) and 10.39 (brs, 1 H). 13C NMR
(DMSO-d6) δ 22.51, 44.05, 106.99, 110.39, 118.48, 123.00, 123.05,
125.05, 126.14, 132.52, 138.62, 142.52, 149.19, 149.40, 153.86and168.47.
HRMS (m/z): [M + H]+ calcd for C16H14ClN2O3, 317.0687; found,
317.0689.
N-((5-Bromo-8-hydroxyquinolin-7-yl)(furan-2-yl)methyl)propionamide
(11). LC-MS: rt (min) = 5.39. 1H NMR (DMSO-d6) δ 1.01 (t, J = 7.6 Hz, 3
H), 2.20 (qd, J = 7.5 and 2.2 Hz, 2 H), 6.07 (d, J = 3.1 Hz, 1 H), 6.37 (dd, J =
3.2 and 1.9 Hz, 1 H), 6.71 (d, J = 8.4 Hz, 1 H), 7.59 (dd, J = 1.8 and 0.8 Hz,
1 H), 7.73 (dd, J = 8.6 and 4.1 Hz, 1 H), 7.88 (s, 1 H), 8.42 (dd, J = 8.6 and
1.6 Hz, 1 H), 8.81 (d, J = 8.8 Hz, 1 H), 8.94 (dd, J = 4.1 and 1.6 Hz, 1 H)
and 10.41 (brs, 1 H). 13C NMR (DMSO-d6) δ 9.81, 28.29, 43.96, 106.94,
108.33, 110.39, 123.38, 123.73, 126.35, 129.63, 134.95, 138.86, 142.51,
149.17, 150.03, 153.96, and 172.22. HRMS (m/z): [M + H]+ calcd for
C17H16BrN2O3, 375.0339; found, 375.0344.
N-((5-Bromo-8-hydroxyquinolin-7-yl)(furan-2-yl)methyl)acetamide
(12). LC-MS: rt (min) = 5.03. 1H NMR(DMSO-d6) δ 1.92 (s, 3 H), 6.04
- 6.11 (m, 1 H), 6.37 (dd, J = 3.2 and 1.9 Hz, 1 H), 6.70 (d, J = 8.6 Hz,
1 H), 7.56ꢀ7.62(m, 1 H), 7.73 (dd, J = 8.5and4.2 Hz, 1 H), 7.87 (s, 1 H),
8.43 (dd, J = 8.6 and 1.6 Hz, 1 H), 8.89 (d, J = 8.6 Hz, 1 H), 8.94 (dd, J =
4.1 and 1.6 Hz, 1 H) and 10.42 (brs, 1 H). 13C NMR (DMSO-d6) δ 22.51,
43.99, 106.96, 108.33, 110.39, 123.38, 123.65, 126.35, 129.61, 134.96, 138.86,
142.52, 149.18, 150.00, 153.87, and 168.47. HRMS (m/z): [M + H]+ calcd
for C16H14BrN2O3, 361.0182; found, 361.019.
Methods. Biological Reagents. All commercial fatty acids (Sigma-
Aldrich Chemical Co.) were repurified using a Higgins HAIsil Semi-
Preparative (5 μm, 250 mm ꢁ 10 mm) C-18 column. Solution A was
99.9% MeOH and 0.1% acetic acid; solution B was 99.9% H2O and 0.1%
acetic acid. An isocratic elution of 85% A:15% B was used to purify all fatty
acids, which were stored at ꢀ80 ꢀC for a maximum of 6 months.
Overexpression and Purification of Human 5-Lipoxygenase, Human
12-Lipoxygenase, and the Human 15-Lipoxygenases. Human platelet
12-lipoxygenase (12-LOX), human reticulocyte 15-lipoxygenase-1 (15-
LOX-1), human epithelial15-lipoxygenase-2 (15-LOX-2), wereexpressed
as N-terminally, His6-tagged proteins and purified to greater than 90%
purity, as evaluated by SDS-PAGE analysis.50,85,86 Human 5-lipoxy-
genase was expressed as a nontagged protein and used as a crude
ammonium sulfate protein fraction, as published previously.87 Iron
content of 12-LOX was determined with a Finnegan inductively coupled
plasma mass spectrometer (ICP-MS), using cobalt-EDTA as an internal
standard. Iron concentrations were compared to standardized iron solutions
and used to normalize enzyme concentrations.
ionamide (2). LC-MS: rt (min) = 5.6. H NMR (DMSO-d6) δ 1.03
(t, J = 7.6 Hz, 3 H), 2.16ꢀ2.28 (m, 2 H), 6.75ꢀ6.78 (m, 1 H), 6.89ꢀ6.96
(m, 2 H), 7.40 (dd, J = 5.1 and 1.0 Hz, 1 H), 7.74 (dd, J = 8.6 and 4.1 Hz,
1 H), 7.79 (s, 1 H), 8.50 (dd, J = 8.5 and 1.5 Hz, 1 H), 8.91 (d, J = 8.8
Hz, 1 H), 8.98 (dd, J = 4.1 and 1.4 Hz, 1 H) and 10.42 (brs, 1 H).;
HRMS (m/z): [M + H]+ calcd for C17H16ClN2O2S, 347.0618; found,
347.0621. (ꢀ)-2 (e.g., 36) [R]D23 = ꢀ24 (c = 0.6, CHCl3); (+)-2 (e.g.,
37) [R]D23 = +24 (c = 0.6, CHCl3).
N-((5-Chloro-8-hydroxyquinolin-7-yl)(thiophen-2-yl)methyl)acetamide
(3). LC-MS: rt (min) = 5.28. 1H NMR (DMSO-d6) δ1.94 (s, 3 H), 6.78 (d,
J = 3.5 Hz, 1 H), 6.89 (d, J = 8.8 Hz, 1 H), 6.94 (dd, J = 5.1 and 3.5 Hz, 1 H),
7.41 (dd, J = 5.1 and 1.0 Hz, 1 H), 7.75 (dd, J = 8.5 and 4.2 Hz, 1 H), 7.78 (s,
1 H), 8.51 (dd, J = 8.6 and 1.4 Hz, 1 H), 8.96ꢀ9.02 (m, 2 H) and 10.43 (brs,
1 H)). HRMS (m/z): [M + H]+ calcd for C16H14ClN2O2S, 333.0459;
found, 333.0460.
N-((5-Bromo-8-hydroxyquinolin-7-yl)(thiophen-2-yl)methyl)prop-
ionamide (4). LC-MS: rt (min) = 5.70. 1H NMR (DMSO-d6) δ 1.03 (t,
J = 7.5 Hz, 3 H), 2.16ꢀ2.29 (m, 2 H), 6.76 (d, J = 3.3 Hz, 1 H), 6.87ꢀ6.96
(m, 2 H), 7.40 (dd, J = 5.1 and 1.0 Hz, 1 H), 7.74 (dd, J = 8.5 and 4.2 Hz, 1
H), 7.96 (s, 1 H), 8.43 (dd, J = 8.6 and 1.4 Hz, 1 H), 8.86ꢀ8.99 (m, 2 H)
and 10.45 (brs, 1 H). HRMS (m/z): [M + H]+ calcd for C17H16BrN2O2S,
391.0105; found, 391.0108.
N-((5-Bromo-8-hydroxyquinolin-7-yl)(thiophen-2-yl)methyl)acetamide
(5) ML127. LC-MS: rt (min) = 5.36. 1H NMR (DMSO-d6) δ 1.94 (s, 3 H),
6.78 (dt, J= 3.5 and 1.2 Hz, 1 H), 6.89 (dd, J= 8.9 and 1.1 Hz, 1 H), 6.93 (dd,
J = 5.1 and 3.3 Hz, 1 H), 7.40 (dd, J = 5.1 and 1.4 Hz, 1 H), 7.74 (dd, J = 8.6
and 4.1 Hz, 1 H), 7.95 (s, 1 H), 8.43 (dd, J = 8.5 Hz and 1.5 Hz, 1 H), 8.95
(dd, J = 4.1 and 1.6 Hz, 1 H), 9.00 (d, J = 8.8 Hz, 1 H) and 10.46 (brs, 1 H).
13C NMR (DMSO-d6) δ 22.55, 45.35, 108.50, 123.41, 124.84, 125.08,
125.68, 126.34, 126.78, 129.38, 134.97, 138.89, 145.91, 149.24, 149.71, and
168.39. HRMS (m/z): [M + H]+ calcd for C16H14BrN2O2S, 376.9954;
found, 376.9956. (ꢀ)-5 (e.g., 34) [R]D23 = ꢀ18 (c = 0.3, CHCl3); (+)-
5 (e.g., 35) [R]D23 = +18 (c = 0.3, CHCl3)
N-((5-Fluoro-8-hydroxyquinolin-7-yl)(thiophen-2-yl)methyl)acetamide
(7).LC-MS: rt (min) = 4.76. 1H NMR (DMSO-d6) δ1.93(s,3H),6.77(dt,
J = 3.5 and 1.2 Hz, 1 H), 6.88ꢀ6.95 (m, 2 H), 7.40 (dd, J = 5.0 and 1.3 Hz,
1 H), 7.47 (d, J = 11.2 Hz, 1 H), 7.68 (dd, J = 8.5 and 4.2 Hz, 1 H), 8.44 (dd,
J = 8.5 and 1.7 Hz, 1 H), 8.91ꢀ8.99 (m, 2 H) and 10.07 (brs, 1 H). 13C
NMR (DMSO-d6) δ 22.55, 45.49, 104.54, 109.27, 109.48, 117.53, 117.72,
122.27, 123.67, 123.73, 124.86, 125.04, 126.73, 129.13, 129.16, 137.80,
137.83, 145.91, 146.04, 146.08, 148.17, 149.52, 150.60 and 168.37. HRMS
(m/z): [M + H]+ calcd for C16H14FN2O2S, 317.076; found, 317.0761.
N-(Furan-2-yl(8-hydroxy-5-nitroquinolin-7-yl)methyl)propionamide
(8). LC-MS: rt (min) = 4.96. 1H NMR (DMSO-d6) δ 1.01 (t, J = 7.6 Hz, 3
H), 2.16ꢀ2.27 (m, 2 H), 6.13 (d, J = 3.3 Hz, 1 H), 6.38 (dd, J = 3.1 and 1.8
Hz, 1 H), 6.69 (d, J = 8.4 Hz, 1 H), 7.61 (d, J = 1.0 Hz, 1 H), 7.90 (dd, J =
8.9 and 4.2 Hz, 1 H), 8.68 (s, 1 H), 8.97 (d, J = 8.4 Hz, 1 H), 9.01 (dd, J =
4.1 and 1.4 Hz, 1 H) and 9.17ꢀ9.21 (m, 1 H). HRMS (m/z): [M + H]+
calcd for C17H16N3O5, 342.1084; found, 342.1082.
N-((5-Chloro-8-hydroxyquinolin-7-yl)(furan-2-yl)methyl)propionamide
(9). LC-MS: rt (min) = 5.26. 1H NMR (DMSO-d6) δ 1.01 (t, J = 7.5 Hz, 3
H) 2.20 (qd, J = 7.5 and 2.6 Hz, 2 H) 6.07 (d, J = 3.1 Hz, 1 H) 6.37 (dd, J =
3.0 and 1.9 Hz, 1 H) 6.72 (d, J = 8.6 Hz, 1 H) 7.59 (s, 1 H) 7.66 - 7.89 (m, 2
H) 8.49 (dd, J = 8.5 and 1.5 Hz, 1 H) 8.80 (d, J = 8.8 Hz, 1 H) 8.97 (dd, J =
4.2 and 1.5 Hz, 1 H) and 10.38 (brs, 1 H). 13C NMR (DMSO-d6) δ 9.81,
28.28, 43.99, 106.95, 110.39, 118.47, 123.04, 123.07, 125.04, 126.15,
132.50, 138.62, 142.51, 149.16, 149.42, 153.95, and 172.21. HRMS
(m/z): [M + H]+ calcd for C17H16ClN2O3, 331.0844; found, 331.0849.
N-((5-Chloro-8-hydroxyquinolin-7-yl)(furan-2-yl)methyl)acetamide
(10). LC-MS: rt (min) = 4.83. 1H NMR (DMSO-d6) δ 1.92 (s, 3 H),
6.06ꢀ6.09 (m, 1 H), 6.37 (dd, J = 3.2 and 1.9 Hz, 1 H), 6.70 (d, J = 8.4
Hz, 1 H), 7.59(dd, J = 1.9 and 1.0 Hz, 1 H), 7.71 (s, 1 H), 7.74 (dd, J = 8.5
and 4.2 Hz, 1 H), 8.50 (dd, J = 8.6 and 1.6 Hz, 1 H), 8.88 (d, J = 8.6 Hz,
High-Throughput Screen: Materials. Dimethyl sulfoxide (DMSO)
ACS grade was from Fisher, while ferrous ammonium sulfate, Xylenol
Orange (XO), sulfuric acid, and Triton X-100 were obtained from
Sigma-Aldrich.
Compound Library. A 153607 compound library was screened in
7ꢀ15 concentrations ranging from 0.7 nM to 57 μM. The library in-
cluded 139798 diverse small drug-like molecules that are part of the NIH
Small Molecule Repository. A collection of 2893 compounds from the
Centers of Methodology and Library Development at Boston University
(BUCMLD) and University of Pittsburgh (UPCMLD) were added to
the library. Several combinatorial libraries from Pharmacopeia, Inc. totaled
1649 compounds. Anadditional1981compounds fromthe NCI Diversity
Set were included. Last, 7286 compounds with known pharmacological
activity were added to provide a large and diverse screening collection.
High-Throughput Screening Protocol and HTS Analysis. All screen-
ing operations were performed on a fully integrated robotic system
(Kalypsys Inc., San Diego, CA) as described elsewhere.88 First, 3 μL of
enzyme (approximately 80 nM 12-LOX, final concentration) was
dispensed into 1536-well Greiner black clear-bottom assay plate. Then
compounds and controls (23 nL) were transferred via Kalypsys PinTool
equipped with 1536-pin array. The plate was incubated for 15 min at
room temperature, and then a 1 μL aliquot of substrate solution (50 μM
5492
dx.doi.org/10.1021/jm2005089 |J. Med. Chem. 2011, 54, 5485–5497