960
H. Huang et al. / Bioorg. Med. Chem. Lett. 22 (2012) 958–962
O
O
a
b
c
2f–g, and 2j–o, could inhibit the activity of DHFR (Percent inhibi-
tion at 10 M >30%), indicating that these nine compounds were
DHFR inhibitors. Therefore, we determined their IC50 values, which
ranged from 1.8 to 19.8 M (Table 1). Among these inhibitors, six
O
O
S
Cl
O
l
OH
O
S
n
n
O
n
3a: n=1
3b: n=2
4
5
l
O
O
O
O
O
O
R1
S
R1
e
d
R1
S
FP-2 & DHFR dual inhibitors (2f–g, 2j, and 2m–o) were found. It
was visible that the inhibitory activity of compound 2o against
FP-2 and DHFR was increased ꢀ8 and ꢀ6 times than that of com-
pound 1, respectively. These encouraging results proved the valid-
ity of our chemical modifications. An analysis of the data shown in
Table 1 reveals some noteworthy observations of the SAR for com-
pounds 1 and 2a–o: (1) Contraction of the chain length of phenyl
alkanamide moiety substantially decreases the FP-2 inhibitory
activity of the derivatives (2a vs 1 and 2b vs 1); (2) Both the
substituents on amide nitrogen and sulfamide nitrogen can
significantly impact the FP-2 inhibitory activity, in case R1 is
4-F-phenyl-containing substituent (2f, 2n and 2o) and/or R2 is thi-
azole heterocyclic-containing substituent (2g, 2j and 2m–o), all
derivatives have improved inhibitory activity against FP-2; (3)
Similar to FP-2 inhibitory activity, both the substituents on amide
nitrogen and sulfamide nitrogen can also significantly impact the
DHFR inhibitory activity, besides thiazole heterocyclic-containing
R2-substituent, 4-MeO-phenyl-containing R2-substituent (2k and
2l) is beneficial; (4) A subtle interplay between heterocyclic sub-
stituents, steric effects, polarity, and hydrogen-bonding capability
seemed to be critical for high dual potency, compounds 2n and
2o represented seemingly the best combination.
N
H
O
N
H
N
H
O
O
R2
OH
N
H
O
n
n
n
6
7
1, 2a and 2c-o
Scheme 1. Reagents and conditions: (a) CH3OH, H2SO4, reflux (yield: 80–90%); (b)
ClSO3H (yield: 60–70%); (c) R1NH2, pyridine, 25 °C (yield: 60–70%); (d) THF/CH3OH/
H2O = 3:1:1, LiOH, 25 °C (yield: 75–85%); (e) (i) (COCl)2, 0 °C, (ii) R2NH2, pyridine,
25 °C (yield: 55–65%).
product 7. After chlorination of acid and N-acylation, the target
compounds 1, 2a and 2c–o were obtained. Compound 2b was syn-
thesized through the approach outlined in Scheme 2. First, com-
pound 8 was oxidized to the carboxylic acid 9 by reaction with
KMnO4. Subsequent chlorination formed the sulfonylchloride 10,
which was then converted to the sulphonamide 11 by reaction
with phenylethylamine. Finally, compound 11 was converted to
the target compound 2b by using the similar process as for com-
pound 2a.
All of the synthesized compounds (2a–o, Table 1) were then
evaluated in two enzymatic activity assays.21,22 FP-2 (30 nM) was
incubated for 30 min at room temperature in 100 mM sodium ace-
tate, pH 5.5, 10 mM DTT, with different concentrations of tested
compounds. Compound solutions were prepared from stock in
DMSO (maximum concentration of DMSO in the assay was 1%).
After 30 min incubation, the substrate Z-Leu-Arg-AMC (benzoxy-
carbonyl-Leu-Arg-7-amino-4-methylcoumarin, Bachem AG) in
The in vivo antimalarial effects of the most potent compound 2o
were investigated in mice infected with Plasmodium berghei ANKA
according to ‘4-day suppress assay’.24 Groups of 10 Kunming mice
(20 2 g) were infected by intraperitoneal (ip) injection with red
blood cells (RBC) (0.2 mL, 5 Â 106) from mice infected P. berghei
ANKA. These Kunming mice were given compound 2o 5 h postin-
fection for four consecutive days intragastrically (ig). The effects
the same buffer was added to a final concentration of 25 lM. The
increase in fluorescence (excitation at 355 nM and emission at
460 nM) was monitored for 30 min at room temperature with an
automated microtiter plate spectrofluorimeter (Molecular Devices,
Flex station). P. falciparum DHFR inhibitory activity assays were
of compound 2o at various dosages (3 mg kgÀ1 dÀ1, 9 mg kgÀ1 dÀ1
,
and 18 mg kgÀ1 dÀ1) were assessed by the average number of RBC
infected in 1000 RBC observed on the fifth day after infection and
by the number of survival mice on the 10th day. As summarized
in Table 2, compound 2o exhibited moderate antimalarial activity
in a dose dependent fashion, and caused 75.6% suppression of par-
asitemia in mice at a concentration of 18 mg kgÀ1 dÀ1, 53.6% sup-
pression at 9 mg kgÀ1 dÀ1, and 44.6% at 3 mg kgÀ1 dÀ1. Although
the antimalarial effect of compound 2o was worse than that of po-
sitive control drug (chloroquine diphosphate salt), its safety and
survival rate were slightly better than that of positive drug (survival
10 vs 9, Table 2).
carried out in 96-well plates in a total assay volume of 200 lL.
The spectrophotometrically assay is based on measuring the oxida-
tion of NADPH to NADP+ at 340 nm.23 The purified DHFR was incu-
bated for 15 min on ice in assay buffer (100 lM NADPH, 50 mM
TES, pH 7.0, 1 mM EDTA, pH 8.0, 75 mM 2-mercaptoethanol,
1 mg/mL bovine serum albumin), with various concentrations of
compound to be tested. After 15 min incubation, the reaction
was initiated with 100 lM DHF. Half-maximal inhibitory concen-
tration (IC50) values were calculated from plots of percentage inhi-
bition of FP-2 and DHFR activities against various compounds
concentration using the GraphPad Prism software with three inde-
pendent experiments
To understand the structural basis for the dual inhibitory activ-
ities of the inhibitors against FP-2 and DHFR, the 3D binding
models of the lead compound 1 and the most potent analog 2o
with FP-2 and DHFR were studied by molecular docking (Fig. 1A–
D). Figure 1A and 1B show the predicted binding poses of 1 and
2o in the catalytic site of FP-2, respectively. The sulfamide moiety
of 1 directly interacts with Asn156 and His157 via H-bonds, while
the dual terminal aromatic groups only float over the surface of the
site and make few contributions to stabilize the binding pose. The
sulfamide and the amide moieties of compound 2o form H-bonds
with Leu155 and Gln19, respectively. Meanwhile, the terminal aro-
matic groups also form hydrophobic interactions with the residues
around them. For DHFR (Fig. 1C and 1D), the catalytic subpocket
formed around Asp54 are occupied by the benzene rings substi-
tuted on nitrogen of sulfamide in both 1 and 2o. But the thiadiazole
nitrogen of compound 2o forms complicated H-bond network with
the Ser120 and Arg122, respectively, which contributes signifi-
cantly to the higher affinity of 2o compared with 1. In the both
cases of DHFR, the sulfamide groups form H-bonds with key resi-
dues (Ile164 for 1 and Ser111 for 2o). From the above analysis,
In a first screening, the inhibitory rates against FP-2 and DHFR
at 10
in Table 1. Six compounds, that is, 2f–g, 2j, and 2m–o, could inhibit
the activity of FP-2 (Percent inhibition at 10 M >30%), indicating
lM were measured for all compounds. The results were listed
l
that these six compounds were FP-2 inhibitors. Therefore, we
determined their IC50 values, which were 13.2, 8.9, 8.1, 2.7, 9.8
and 7.0
l
M, respectively (Table 1). Nine compounds, that is, 2a,
a
b
SO3H
HOOC
O
SO3K
HOOC
O
SO2Cl
8
10
2b
9
OH
O
NH2
HN
O
d
Ph
O
O
Ph
S
NH
Ph
S
NH
O
O
c
11
Scheme 2. Reagents and conditions: (a) KOH, H2O, K2MnO4, 80 °C (yield: 50%); (b)
ClSO3H, 25 °C (yield: 20%); (c) pyridine (yield: 50%); (d) (i) (COCl)2, 0 °C, (ii)
2,3-dihydrobenzo[b][1,4]dioxin-6-amine, pyridine, 25 °C (yield: 60%).