The Journal of Organic Chemistry
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distilled triethylamine (20 mL) then added to an air-free (under Ar)
storage tube containing Pd(PPh3)2Cl2 (0.100 g, 0.143 mmol), CuI
(0.027 g, 0.143 mmol), and 3-ethynylpyridine (0.38 g, 3.72 mmol).
Additional triethylamine (10 mL) was added before the tube was
sealed and heated at 80 °C for one day. After cooling and diluting
contents with CH2Cl2, the organic phase was washed with saturated
NH4Cl solution (2 × 30 mL), distilled water (3 × 20 mL), and brine
(2 × 20 mL), dried with anhydrous Na2SO4, filtered and concentrated
under reduced pressure. The crude sample was purified via flash
chromatography (silica gel, CH2Cl2). Appropriate fractions were
concentrated to reveal the product as a yellow oil (0.905 g, 1.4 mmol,
49% yield from 1,2-bis(dodecyloxy)-4,5-diiodobenzene). 1H NMR
(400 MHz, CDCl3): δ = 8.78 (d, J = 1.3 Hz, 1H), 8.53 (dd, J = 4.9, 1.4
Hz, 1H), 7.80 (dt, J = 7.9, 1.9 Hz, 1H), 7.27 (m, 1H), 6.98 (s, 1H),
6.97 (s, 1H), 4.00 (m, 4H), 1.83 (p, J = 6.7 Hz, 4H), 1.5−1.2 (m,
36H), 0.88 (t, J = 6.3 Hz, 6H), 0.26 (s, 9H) ppm. 13C NMR (100.6
MHz, CDCl3): δ = 152.6, 149.9, 149.7, 148.7, 138.5, 123.3, 121.1,
119.2, 118.5, 116.8, 116.3, 104.0, 97.3, 92.2, 88.6, 69.6, 69.6, 32.3, 30.0,
30.0, 29.9, 29.7, 29.4, 26.3, 23.0, 14.4, 1.3 ppm. ESI-MS (m/z) calcd
for C42H65NO2SiH+ 644.4863; found 644.4880.
3-((4,5-Bis(dodecyloxy)-2-ethynylphenyl)ethynyl)pyridine
(10). Protected alkyne 9 (0.90 g, 1.4 mmol) was dissolved in THF (20
mL) and the solution cooled to −84 °C (EtOAc/N2). Tetrabuty-
lammonium fluoride (2.0 mL, 1.0 M solution in THF, 2.0 mmol) was
added dropwise via syringe. The reaction mixture was allowed to
slowly warm to room temperature, then stir for one day. After gentle
removal of the solvent (bath temp. < 40 °C) under reduced pressure,
the crude product was purified via flash chromatography (silica gel,
CH2Cl2). Concentration of appropriate fractions revealed the product
as a greyish/white solid (0.61 g, 1.1 mmol, 75% yield). 1H NMR (400
MHz, CDCl3): δ = 8.78 (d, J = 1.4 Hz, 1H), 8.53 (dd, J = 4.8, 1.6 Hz,
1H), 7.81 (dt, J = 7.9, 1.8 Hz, 1H), 7.27 (m, 1H), 6.99 (s, 2H), 4.01
(q, J = 6.6 Hz, 4H), 3.29 (s, 1H), 1.82 (m, 4H), 1.46 (m, 4H), 1.4−1.2
(m, 32H), 0.88 (m, 6H) ppm. 13C NMR (100.6 MHz, CDCl3): δ =
152.6, 149.8, 149.8, 148.7, 138.6, 123.3, 121.0, 118.6, 118.0, 116.9,
116.1, 91.8, 88.7, 82.6, 80.1, 69.5, 32.2, 30.0, 30.0, 29.9, 29.7, 29.7,
29.4, 26.3, 23.0, 14.4, 1.3 ppm. ESI-MS (m/z) calcd for C39H57NO2H+
572.4468; found 572.4471.
2,5-Bis((4,5-bis(dodecyloxy)-2-(pyridin-3-ylethynyl)phenyl)-
ethynyl)pyrazine (3). Terminal alkyne 10 (0.300 g, 0.52 mmol) was
dissolved in freshly distilled triethylamine (25 mL) and transferred via
syringe to an air-free storage tube under argon. 2,5-Diiodopyrazine
(0.083 g, 0.24 mmol), CuI (0.0186 g, 0.098 mmol), PdCl2(PhCN)2
(0.0053 g, 0.0138 mmol), and 2-dicyclohexylphosphino-2′,4′, 6′-
triisopropylbiphenyl (X-Phos, 0.0036 g, 0.0076 mmol) were added
to the reaction tube and rinsed into solution with 5 mL NEt3. The
tube was sealed and heated at 80 °C for one day. After cooling to room
temperature, the mixture was diluted with CH2Cl2. This organic
mixture was washed with saturated NH4Cl solution until the aqueous
layer was no longer blue. The aqueous phases were then extracted with
CH2Cl2 (3×). The combined organic layers were washed with distilled
water and brine then concentrated under reduced pressure. This crude
mixture was purified using consecutive flash chromatography columns
(1st: silica gel, CH2Cl2 then 5% MeOH/95% CH2Cl2. second: silica
gel, 1% MeOH in CHCl3). Appropriate fractions were concentrated to
reveal the product as a brownish solid (0.124 g, 0.10 mmol, 42% yield,
mp = 160−163 °C). 1H NMR (400 MHz, CDCl3): δ = 8.86 (d, J = 1.4
Hz, 2H), 8.72 (s, 2H), 8.55 (dd, J = 4.9, 1.5 Hz, 2H), 7.91 (dt, J = 7.7,
1.9 Hz, 2H), 7.29 (dd, J = 7.8, 4.9 Hz, 2H), 7.11 (s, 2H), 7.05 (s, 2H),
4.05 (m, 8H), 1.86 (m, 8H), 1.6−1.2 (m, 72H), 0.88 (t, J = 6.8 Hz,
12H) ppm. 13C NMR (100.6 MHz, CDCl3): δ = 152.2, 150.4, 149.6,
148.6, 147.0, 138.4, 137.8, 123.1, 120.5, 118.9, 116.9, 116.1, 115.6,
94.4, 91.3, 89.4, 89.1, 69.3, 31.9, 29.7, 29.7, 29.6, 29.4, 29.0, 26.0, 22.7,
14.1 ppm. ESI-MS (m/z) calcd for C82H115N4O4H+ 1219.8918; found
1219.8794. λmax nm (ε, M−1cm−1) (THF) = 299 (67700), 406
(33900).
(0.0801 g, 0.24 mmol), CuI (0.0030 g, 0.016 mmol), PdCl2(PhCN)2
(0.0047 g, 0.012 mmol), and 2-dicyclohexylphosphino-2′,4′,6′-
triisopropylbiphenyl (X-Phos, 0.0034 g, 0.0072 mmol) were added
and rinsed into the container with additional triethylamine (5 mL).
The tube was sealed and heated at 80 °C for one day. After cooling to
room temperature, the contents of the tube were diluted with CH2Cl2.
This organic layer was washed with saturated NH4Cl solution (2 × 30
mL), distilled water (3 × 30 mL) and brine (2 × 30 mL), then dried
with anhydrous Na2SO4, filtered and concentrated under reduced
pressure. This crude mixture was purified by flash chromatography
(silica gel, 50% EtOAc/50% hexane increasing to 90% EtOAc/10%
hexane). Appropriate fractions were concentrated to reveal the
product as a brown solid (0.220 g, 0.18 mmol, 75% yield, mp =
1
85−88 °C). H NMR (400 MHz, CDCl3): δ = 8.69 (s, 2H), 8.53 (s,
2H), 8.42 (dd, J = 4.8, 1.2 Hz, 2H), 7.74 (dt, J = 7.9, 1.8 Hz, 2H), 7.13
(dd, J = 7.8, 4.9 Hz, 2H), 7.00 (s, 2H), 6.92 (s, 2H), 4.00 (t, J = 6.6
Hz, 4H), 3.85 (t, J = 6.6 Hz, 4H), 1.84 (p, J = 7.0 Hz, 4 H), 1.78 (p, J
= 7.0 Hz, 4H), 1.5−1.2 (m, 72H), 0.88 (t, J = 6.8 Hz, 12H) ppm. 13C
NMR (100.6 MHz, CDCl3): δ = 152.1, 150.1, 149.3, 148.2, 142.4,
141.8, 138.4, 122.8, 120.4, 118.7, 117.2, 116.3, 115.3, 95.4, 91.4, 89.4,
88.7, 69.3, 69.0, 32.0, 31.9, 29.8, 29.7, 29.7, 29.7, 29.5, 29.4, 29.4, 29.1,
26.0, 26.0, 22.7, 14.1 ppm. ESI-MS (m/z) calcd for C82H115N4O4H+
1219.8918; found 1219.8808. λmax nm (ε, M−1cm−1) (THF) = 273
(19800), 303 (21600), 350 (9600).
4-((4,5-Bis(dodecyloxy)-2-((triisopropylsilyl)ethynyl)phenyl)-
ethynyl)pyridine (11). Pd(PPh3)2Cl2 (0.022 g, 0.031 mmol) and
CuI (0.006 g, 0.031 mmol) were added to a storage tube under Ar.
After three vacuum/purge cycles (Ar), 4-bromopyridine hydrochloride
(0.120 g, 0.616 mmol) was added and rinsed into the container with
degassed DMF (2 mL). The terminal alkyne precursor (obtained by
methods reported by Zhao)31 was taken up in degassed diisopropyl-
amine (4 mL) then transferred to the reaction tube, followed by
additional DIPA (2 mL). The tube was sealed and heated at 60 °C for
20 h. After cooling to room temperature, the contents were transferred
to a separatory funnel with diethyl ether and sat. NH4Cl solution. The
layers were separated and the organic phase washed sequentially with
sat. NH4Cl solution then brine, dried with anhydrous Na2SO4, filtered
and concentrated. The resulting brown oil was purified via flash
chromatography (silica, 25% ether/75% hexane eluent) to reveal a
light brown oil (0.261 g, 0.36 mmol, 58% yield). 1H NMR (400 MHz,
CDCl3): δ = 8.57 (m, 2H), 7.35 (m, 2H), 6.98 (s, 1H), 6.96 (s, 1H),
4.01 (m, 4H), 1.83 (m, 4H), 1.5−1.2 (m, 36H), 1.12 (s, 21H), 0.88 (t,
J = 6.9 Hz, 6H) ppm. 13C NMR (100.6 MHz, CDCl3): δ = 149.8,
149.6, 149.2, 131.8, 125.6, 119.3, 117.5, 116.7, 116.3, 105.2, 93.6, 93.4,
88.6, 69.3, 69.2, 31.9, 29.7, 29.7, 29.6, 29.4, 29.1, 29.1, 26.0, 26.0, 22.7,
18.7, 14.1, 11.4 ppm. ESI-MS (m/z) calcd for C48H77NO2SiH+
728.5802; found 728.5739.
4-((4,5-Bis(dodecyloxy)-2-ethynylphenyl)ethynyl)pyridine
(12). TIPS-protected alkyne 11 (0.261 g, 0.36 mmol) was dissolved in
wet THF (10 mL) then cooled to −89 °C (2-propanol/liq. N2). TBAF
(1 M in THF, 0.36 mL, 0.36 mmol) was added dropwise via syringe.
The mixture stirred on the cold bath for 20 min, then was removed
from the bath and was allowed to stir for another 20 min. The mixture
was rinsed into a separatory funnel with sat. NH4Cl solution and
diethyl ether. The layers were separated and the organic layer was then
washed with H2O and brine, dried with anhydrous Na2SO4, filtered
and concentrated. The resulting residue was purified via flash
chromatography (silica, 50% ether/50% hexane) to yield a white
solid (0.166 g, 0.29 mmol, 81% yield). 1H NMR (400 MHz, CDCl3): δ
= 8.59 (m, 2H), 7.38 (m, 2H), 6.99 (s, 1H), 6.99 (s, 1H), 4.01 (m,
4H), 3.30 (s, 1H), 1.83 (m, 4H), 1.5−1.2 (m, 36 H), 0.88 (m, 6H)
ppm. 13C NMR (100.6 MHz, CDCl3): δ = 149.8, 149.7, 149.5, 131.7,
125.5, 118.1, 117.7, 116.5, 115.9, 93.0, 89.1, 82.2, 79.9, 69.3, 69.2, 31.9,
29.7, 29.7, 29.6, 29.4, 29.1, 29.0, 26.0, 22.7, 17.7, 14.1, 12.3 ppm. ESI-
MS (m/z) calcd for C39H57NO2H+ 572.4468; found 572.4404.
2,5-Bis((4,5-bis(dodecyloxy)-2-(pyridin-4-ylethynyl)phenyl)-
ethynyl)pyrazine (5). PdCl2(PhCN)2 (1.6 mg, 0.0042 mmol), X-
Phos (2.0 mg, 0.0042 mmol), 2,5-diiodopyrazine (0.046 g, 0.14 mmol)
and CuI (∼1 mg) were added to a reaction tube and oxygen was
removed via three vacuum/purge cycles (Ar). Degassed DMF (1 mL)
2,3-Bis((4,5-bis(dodecyloxy)-2-(pyridin-3-ylethynyl)phenyl)-
ethynyl)pyrazine (4). Terminal alkyne 10 (0.300 g, 0.52 mmol) was
dissolved in freshly distilled triethylamine (30 mL) and transferred via
syringe to an air-free storage tube under argon. 2,3-Diiodopyrazine
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dx.doi.org/10.1021/jo300034h | J. Org. Chem. 2012, 77, 2571−2577