R.N. Singh et al. / Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 113 (2013) 378–385
379
Vibrational analysis
Hydrogen-bonding
QTAIM analysis
vibration of NH and CN. To investigate the strength and nature of H-bonding, topological parameters at
bond critical points (BCPs) are analyzed by ‘Quantum theory of Atoms in molecules’ (QTAIMs). Natural
bond orbitals (NBOs) analysis has been carried out to investigate the intramolecular conjugative and
hyperconjugative interactions within molecule and their second order stabilization energy (E(2)). Global
Reactivity descriptors
electrophilicity index (
x = 4.528 eV) shows that title molecule (3) is a strong electrophile. The maximum
values of local electrophilic reactivity descriptors (fkþ; skþ; xkþ) at vinyl carbon (C6/C22) of (3) indicate that
these sites are more prone to nucleophilic attacks.
Ó 2013 Elsevier B.V. All rights reserved.
Introduction
Experimental details
Dipyrromethane and its derivatives are the building blocks for
the syntheses of a variety of calix[n] pyrroles, porphyrins [1–4],
polypyrrolicmacrocycles [5], hexaphyrin [6] and corroles [7,8].
The oxidized dipyrromethanes named as dipyrromethenes or
dipyrrins give monoanionic, conjugated, planar ligands that have
attracted attention in the metal organic framework and have
strong coordinating ability towards different metal ions as Li(I),
Zn(II), Ni(II), Pd(II/III), Cu(II) and Sn(II) [9–12]. They are reported
as versatile ligands for coordination chemistry and supramolecular
self-assembly with various transition metal ions [13,14]. The het-
eroleptic complexes and coordination polymers of dipyrrin are
used for developing novel magnetic and electronic materials [15–
19]. The dipyrrinato metal complexes of Ga(III), In(III) have shown
luminescent properties [20] and its several metal–organic frame-
works (MOFs) with Ag + salts generate strong optical absorption
materials [21]. Dipyrromethane based amido–imine hybrid macro-
cycles have shown oxoanions receptor property [22]. Dipyrrins are
also used as ligands for the syntheses of boron dipyrromethene
(BODIPY) [23–25], which are used extensively as molecular probes
and dyes.
Synthesis of 1,9-bis(2-cyano-2-ethoxycarbonylvinyl)-5-(4-
hydroxyphenyl)-dipyrromethane (3)
Ethyl 2-cyano-3-(1H-pyrrol-2-yl)-acrylate (1) was prepared by
an earlier reported method. To the solution of ethyl 2-cyano-3-
(1H-pyrrol-2-yl)-acrylate (0.200 g, 1.0522 mmol) and 4-hydroxy-
benzaldehyde (0.0642 g, 0.5261 mmol) in 20 ml dichloromethane,
p-toluene sulfonic acid (0.0002 g) as catalyst was added. The reac-
tion mixture was refluxed for 8 h, the color of reaction was chan-
ged to dark brown and completion of the reaction was analyzed
by thin layer chromatography (TLC). Reaction mixture was washed
with saturated aqueous solution of NaHCO3 and extracted with
CH2Cl2 (15 ml ꢃ 3). The organic layer was dried over MgSO4 and
solvent was removed under reduced pressure. Remaining solid
was purified by column chromatography on silica using hexane
and ethyl acetate and pure product (3) was obtained. Dark brown
color compound yielded: 0.1839 g, 72.20%; m.p.: 132–136 °C;
DART Mass for C27H24N4O5: Calc. 484.1748 amu, Found m/z
485.25 [M+H+].
Quantum chemical calculations
Hydrogen bonds are of versatile importance in fields of chemis-
try and biochemistry, as they govern chemical reactions, supramo-
lecular structures, molecular assemblies and life processes. Intra
and intermolecular hydrogen bonds are classified in two categories
depending upon the nature of changes in bond length during the
hydrogen bridges formation [26–28].
Cyanovinyl was employed first by Fisher [26,29] as protecting
group for formyl in pyrrole for the synthesis of 2,5-diformyl-3,4-
dimethylpyrrole and later by Woodward [30] in the synthesis of
chlorophyll. The C-vinylpyrrole fragment is found to be reactive
for the target synthesis of conjugated and fused heterocycles sim-
ilar to natural pyrrole assemblies [31,32]. The functionalized C-
vinylpyrroles are prospective new materials for molecular optical
switches, nanodevices, photo- and electro-conducting applications
and also used as ligands for new photo catalysts, biologically active
complexes [33–35].
All the quantum chemical calculations were carried out with
Gaussian 03 program package [42] using B3LYP functional and 6-
31G(d,p) basis set [43–45]. Potential energy distribution along
internal coordinates was calculated by Gar2ped software. Topolog-
ical parameters were calculated using software AIM2000 [46].
Results and discussion
Thermochemistry
Optimized geometry of the reactants ethyl 2-cyano-3-(1H-pyr-
rol-2-yl)-acrylate (1) and 4-hydroxybenzaldehyde (2) and product
1,9-bis(2-cyano-2-ethoxycarbonylvinyl)-5-(4-hydroxyphenyl)-
dipyrromethane (3) and byproduct water (4) involved in chemical
reaction are shown graphically in Scheme 1. The calculated ther-
modynamic parameters – Enthalpy (H/a.u.), Gibbs free energy (G/
a.u.) and Entropy [S/(cal/mol K)] of (1), (2), (3), (4) and their change
for Reaction, at 25 °C are listed in Table 1. The calculated negative
In observation of above applications of cyanovinyl contain-
ing
dipyrromethane-1,9-bis(2-cyano-2-ethoxycarbonylvinyl)-5-
(4-hydroxyphenyl)-dipyrromethane (3) has been synthesized
and characterized using 1H NMR, UV–Visible, FT-IR and Mass
spectroscopic techniques. Quantum chemical calculations have
been carried out using DFT to determine the thermodynamic
parameters and the nature of the reaction. The 1H NMR chem-
ical shifts and vibrational analysis indicated the existence of
intramolecular H-bonding. To investigate the strength and nat-
ure of intramolecular H-bonding, topological and energetic
parameters at bond critical points (BCPs) have been analyzed
using QTAIM. NBOs analysis has been carried out to investigate
the intramolecular conjugative and hyperconjugative interac-
tions within molecule and their second order stabilization en-
ergy. The nature of chemical reactivity and site selectivity of
this molecule has been determined on the basis of Global and
Local reactivity descriptors [36–41].
values of enthalpy change (
energy factor is favorable, whereas Gibbs free energy (G) factor is
unfavorable. The calculated positive value of ( G) shows that this
DH) and entropy change (DS) show that
D
reaction is non-spontaneous. At 25 °C, thermodynamic equilibrium
constant (KT) for this reaction is calculated as 2.7883 ꢃ 10ꢁ7 i.e.
Keq ꢄ 1 indicating that the reaction will require elevation of tem-
perature and presence of catalyst.
Molecular geometry
Optimized geometry for the ground state lower energy con-
former of (3) is shown in Fig. 1. Selected optimized geometrical
parameters of (3) are listed in S Table 1 of Supplementary material.