L. Zhao et al. / Bioorg. Med. Chem. Lett. 24 (2014) 900–904
903
properties of such compounds had. Additional, the observed spec-
1.2
1.0
0.8
0.6
0.4
0.2
0.0
Ct-DNA
Ct-DNA + 7b
Ct-DNA + 7e
Ct-DNA + 7f
Ct-DNA + 13b
Ct-DNA + 13e
Ct-DNA + 13f
tral changes (significant blue shift and hypsochromism) in com-
pounds 7b, 7e, and 7f implied that they would insert into the
base pairs of DNA as DNA-intercalating agents,11 while 13b, 13e,
and 13f (little blue shift and middle hypsochromism) possibly
acted in a same binding mode with DNA.12
The fluorescence properties were performed to investigate the
interactions between compounds 7b, 7e, 7f, 13b, 13e, and 13f
and Ct-DNA in phosphate buffer (10 mM, pH 7.4) containing
50 mM NaCl at 25 °C. As shown in Figure 3, all compounds showed
similar binding properties with Ct-DNA around 455 nm in the fluo-
rescence spectra. Upon addition of DNA, fluorescence intensities
increased markedly, possibly due to the coplanar modulation of
the conformation of 3- and 4-phenyl groups induced by Ct-
DNA.13 The maximum emission bands were blue shifted which im-
plied that these compounds entered Ct-DNA-stacking region with
lower polarity than the buffer solution,14 and intercalated into
the bases of the Ct-DNA.13a The observed fluorescence intensities
were quantified by plotting F/F0 as a function of Ct-DNA concentra-
tions, where F0 and F are the fluorescence intensity without and
with Ct-DNA, respectively. Stern–Volmer analysis gave deep in-
sight into the binding efficiency of fluorescence enhancement of
the coumarins with increasing concentrations of Ct-DNA.13a The
55 60 65 70 75 80 85
o
Temperature ( C)
Figure 5. DNA melting curves for Ct-DNA (5.0 Â 10À5 M) in the absence and
presence of 7b, 7e, 7f, 13b, 13e, and 13f with concentration of 5.0 Â 10À6 M in
phosphate buffer (1 mM, pH 7.4) containing 5 mM NaCl and 2% DMSO at 25 °C.
Table 4
Average Tm and
and 13f
DTm for Ct-DNA in the absence and presence of 7b, 7e, 7f, 13b, 13e,
Compds
Tm (°C)
D
Tm (°C)
Ct-DNA
7b
7e
67.0
70.0
71.5
71.0
68.2
68.8
69.2
0
3.0
4.5
4.0
1.2
1.7
2.2
7f
13b
13e
13f
calculated binding efficiency (Table 3) were 1.2 Â 104 MÀ1
,
1.0 Â 104 MÀ1, and 1.4 Â 104 MÀ1 for compounds 7b, 7e, and 7f,
and 7.0 Â 103 MÀ1, 6.0 Â 103 MÀ1, and 5.2 Â 103 MÀ1 for com-
pounds 13b, 13e, and 13f (Fig. 3, inset), respectively.15 The
Stern–Volmer plots indicate that the fluorescence of compounds
7b, 7e, and 7f possessing two amino side chains at 4-position on
3-, 4-phenyl, respectively, is higher sensitive to the Ct-DNA con-
centrations than those of 13b, 13e, and 13f. These results are con-
sistent with the observations by UV, that is, the closer distance of
the two side chains is of benefit to improving the DNA binding
capacity of these coumarins.
triphenylethylene–coumarin hybrid derivatives (350–500 nm),
which indicated that 7b, 7e, 7f, 13b, 13e, and 13f intercalated
DNA with a vertical orientation in the intercalation pocket.18
It is well known that the temperature at which a half of a DNA
sample melts is known as the melting temperature (Tm). A change
of Tm may be observed if a molecule binds with DNA.19 Thus the
thermal behavior of DNA in the presence of the triphenylethy-
lene–coumarin hybrid derivatives provides useful information on
the conformational changes and the strength of the DNA-
compound complexes. The melting curves of Ct-DNA in the ab-
sence and presence of 7b, 7e, 7f, 13b, 13e, and 13f are illustrated
in Figure 5 and Table 4, respectively. The Tm value for the free
Ct-DNA was 67.0 °C. Upon addition of 7b, 7e, and 7f, obvious
changes in the DNA melting temperature were observed. The Tm
values increased to 70.0, 71.5 and 71.0 °C, respectively, and the
CD is a useful technique to investigate the conformational
changes in DNA morphology during small molecules-DNA interac-
tions. As shown in Figure 4, the CD spectrum of free Ct-DNA
showed a negative band at 246 nm due to the polynucleotide helic-
ity, and a positive band at 277 nm due to the base staking, which
indicated that the Ct-DNA existed in the right-band B form.16 Upon
addition of all the tested compounds, the intensity of the positive
band at 277 nm increased obviously, while the intensity of the neg-
ative band at 246 nm decreased (without significant wavelength
change). This observation implied that these compounds could
intercalate DNA and induce a B to A conformational change on
Ct-DNA.17 The order of the intensity change of 7b, 7e, and 7f
(strong intercalation) >13b, 13e, and 13f (poor intercalation),
which was in agreement with the UV–vis analysis. Additional, very
weak positive induced circular dichroisms (ICD) signals were
observed in the region of the characteristic absorption of these
levels of the increased melting temperature (DTm) induced by
DNA-compound interactions were 3.0, 4.5 and 4.0 °C, respectively.
Compounds 13b, 13e, and 13f possessed lower DNA melting tem-
perature than 7b, 7e, and 7f, and the
DTm values were 1.2, 1.7, and
2.0 °C, respectively. These results further illuminated that com-
pounds 7b, 7e, and 7f with various amino alkyl chains at 4-position
on 3-,4-phenyl, respectively, exhibited strong affinities with Ct-
DNA, consistent with the results from the fluorescence data.
Considering all the above results, we could conclude that the
novel triphenylethylene-coumarin hybrid derivatives with two
amino side chains possessed the intercalative mode of binding
properties with DNA, such as 7b, 7e, 7f, 13b, 13e, and 13f. When
the two chains locate at 4-position on 3-,4-phenyl, respectively,
like 7b, 7e, and 7f, the intercalative binding is more efficient pos-
sibly due to the different noncovalent force between the chains
and DNA grooves.20 The similar binding constants of 7b, 7e, and
7f indicated that the basic amino group (except morpholinyl) had
little effects on their interactions with DNA, although they affected
their anti-tumor activities. These compounds possessed potential
application as novel DNA staining agent. Furthermore, it should
be noticed that the anti-tumor activity of such coumarins did not
tie in very closely with the observed DNA binding, for example
7e, 7f and 13e, 13f. That is, compounds 7e and 7f with low
8
6
4
2
Ct-DNA
Ct-DNA + 7b
Ct-DNA + 7e
Ct-DNA + 7f
Ct-DNA + 13b
Ct-DNA + 13e
Ct-DNA + 13f
0
-2
1.0
0.5
0.0
-4
-6
-0.5
-1.0
360
400
440
480
Wavelength/nm
-8
240
280
320
360
Wavelength/nm
Figure 4. CD spectra of Ct-DNA (5.0 Â 10À5 M) in the absence and presence of 7b,
7e, 7f, 13b, 13e, and 13f (2.0 Â 10À5 M) in phosphate buffer (10 mM, pH 7.4)
containing 50 mM NaCl and 2% DMSO at 25 °C.