4
M. Mojzych et al. / Bioorg. Med. Chem. xxx (2014) xxx–xxx
Table 4
washed three times with PBS and then incubated for4 h in 1 ml
of MTT solution (0.5 mg/ml of PBS) at 37 °C in 5% CO2 in an incuba-
tor. The medium was removed and 1 ml of 0.1 mol/l HCI in abso-
lute isopropanol was added to attached cells. Absorbance of
converted dye in living cells was measured at a wavelength of
570 nm. Cell viability of breast cancer cells cultured in the pres-
ence of studied compounds was calculated as a per cent of control
cells. The experiments were performed in triplicates. After treat-
ment of the cells with drug, the ratio of survived to dead cells in
tested and control (untreated) cells was calculated for each drug
concentration. Cell number was plotted versus drug concentration,
and IC50 values were calculated from dose-response curves as the
concentration of drugs that reduce the number of viable cells to
50% of control using an Origin 7.5 software.
CA I, II, IX and XII inhibition data for compounds 5, 6 and sulphonamides 8a–8i24
Compd
KI* (nM)
hCA IX
hCA I
hCA II
hCA XII
5
6
8a
8b
8c
8d
8e
8f
8g
8h
8i
8j
>50,000
>50,000
>50,000
>50,000
nt
774
826
667
703
nt
89
82
>50,000
>50,000
nt
6.6
9.0
5.3
5.7
nt
>50,000
>50,000
>50,000
>50,000
>50,000
>50,000
270
492
6.3
>50,000
652
>50,000
23.7
824
26.5
6.2
8.1
5.9
7.1
6.2
7.5
7.9
5.8
918
62.1
719
772
8.0
43.8
25
Acetazolamide
250
12
3.1.4. Collagen synthesis assay
Acetazolamide (5-acetamido-1,3,4-thiadiazole-2-sulfonamide) was used as stan-
Incorporation of a radioactive precursor into proteins was
dard drug in the assay.
nt = not tested.
measured after labeling the cells with 5-[3H]proline (5
lCi/mL,
*
28 Ci/mmol) for 24 h in growth medium with varying concentra-
tions of PAMAM-CH conjugate or chlorambucil.27 Incorporation
of a tracer into collagen was determined by digesting proteins with
purified Clostridium histolyticum collagenase, according to the
method of Peterkofsky.28 Results were shown as combined values
for cell plus medium fractions.
Mean from 3 different assay, by a CO2 hydration stopped-flow assay method.
62.1–918 nM. It is difficult to explain the striking difference of
activity between 8e (an effective CAI) and the structurally congen-
ers related 8d and 8f, differing by few atoms compared to 8e, and
acting as ineffective hCA II inhibitors (Table 4).
3.1.5. CA activity and inhibition measurements
The tumor-associated isoforms hCA IX and XII,26 were on the
other hand better inhibited by some of the derivatives investigated
here. Thus, hCA IX was not at all inhibited by four of the new deriv-
atives (8a, 8b, 8d and 8f), was weakly inhibited by two of them (8e
and 8h), whereas 5, 6, 8g, 8i and 8j were more effective as hCA IX
inhibitors, with KIs in the range of 23.7–89 nM.
An applied photophysics stopped-flow instrument has been used
for assaying the CA catalysed CO2 hydration activity. Phenol red (at a
concentration of 0.2 mM) has been used as indicator, working at the
absorbance maximum of 557 nm, with 10–20 mM Hepes (pH 7.5) as
buffer, and 20 mM Na2SO4 for maintaining constant the ionic
strength, following the initial rates of the CA-catalyzed CO2 hydra-
tion reaction for a period of 10–100 s.24 The CO2 concentrations ran-
ged from 1.7 to 17 mM for the determination of the kinetic
parameters and inhibition constants. For each inhibitor, at least
six traces of the initial 5–10% of the reaction have been used for
determining the initial velocity. The uncatalyzed rates were deter-
mined in the same manner and subtracted from the total observed
rates. Stock solutions of inhibitors (0.01 mM) were prepared in
distilled-deionized water and dilutions up to 0.01 nM were done
thereafter with distilled-deionized water. Inhibitor and enzyme
solutions were preincubated together for 15 min at room tempera-
ture prior to assay, in order to allow for the formation of the E–I
complex. The inhibition constants were obtained by non-linear
least-squares methods using PRISM 3 and the Cheng–Prusoff equa-
tion, whereas the kinetic parameters for the uninhibited enzymes
from Lineweaver–Burk plots, as reported earlier,29 and represent
the mean from at least three different determinations.
On the contrary, hCA XII was potently inhibited (KIs <10 nM) by
all the reported compounds from the ms (Table 4).
3. Experimental
3.1. Pharmacology
3.1.1. Cell culture
Human breast cancer MDA-MB-231 and MCF-7 cells were
maintained in DMEM supplemented with 10% fetal bovine serum
(FBS), 50 U/ml penicillin, 50 lg/ml streptomycin at 37 °C. Cells
were cultured in Costar flasks and subconfluent cells were
detached with 0.05% trypsin and 0.02%EDTA in calcium-free phos-
phate buffered saline, counted in hemocytometers and plated at
5 ꢀ 105 cells per well of 6-well plates (Nunc) in 2 ml of growth
medium (DMEM without phenol red with 10% CPSR1). Cells
reached about 80% of confluency at day 3 and in most cases such
cells were used for the assays.
4. Conclusion
3.1.2. DNA synthesis assay
In conclusion, we report a practical, high yielding, and scalable
method for the preparation of two groups of new 1H-pyrazolo[4,3-
e][1,2,4]triazine sulfonamides from simple, available starting
materials. The preliminary antitumor studies revealed that these
derivatives exhibited moderate antitumor activity in breast cancer
cells ex vivo. These compounds were ineffectively as hCA I and II
inhibitors, but inhibited appreciably the tumor-associated iso-
forms hCA IX and XII.
MCF-7 and MDA-MB-231 cells were seeded in 6-well plates and
were incubated with varying concentrations of 6a–6l or chloram-
bucil and 0.5 l
Ci of [3H]-thymidine for 24 h at 37 °C. The cells were
then harvested by trypsinization, washed with cold phosphate-
buffered saline and centrifuged for 10 min at 1500 g several times
(4–5) until the dpm in the washes were similar to the reagent con-
trol. Radioactivity was determined by liquid scintillation counting.
[3H]-thymidine uptake was expressed as dpm/well.
3.1.3. Cell viability assay
Acknowledgement
The assay was performed according to the method of Carmi-
chael using 3-(4,5-dimethylthiazole-2-yl)-2,5-diphenyltetrazolium
bromide (MTT).23 Confluent cells, cultured for 24 h with various
concentrations of studied compounds in 6-well plates were
This research was funded by the National Science Centre,
Poland (Grant NN405 092340) and by an FP7 EU project (Metoxia),
to CTS.