Synthesis of N-(3-arylprop-2-ynyl)substituted olanzapine derivatives as potential inhibitors of PDE4B

Article abstract of DOI:10.1016/j.tetlet.2014.04.009

The linkage between dopamine D2 receptors and PDE activity via cAMP prompted us to design a series of novel N-(3-arylprop-2-ynyl)substituted olanzapine derivatives as potential inhibitors of PDE4B. The target compounds were conveniently prepared by using a simple and inexpensive method involving Pd/C-mediated CC bond forming reaction under Sonogashira conditions. A number of compounds were synthesized by using this strategy in good yields. Some of the compounds showed promising inhibition of PDE4B when tested in vitro that was supported by the docking studies.

Full text of DOI:10.1016/j.tetlet.2014.04.009

Tetrahedron Letters 55 (2014) 3176–3180
Contents lists available at ScienceDirect
Tetrahedron Letters
journal homepage: www.elsevier.com/locate/tetlet
Synthesis of N-(3-arylprop-2-ynyl)substituted olanzapine derivatives
as potential inhibitors of PDE4B
P. Vijaya Babu a,b, Dhilli Rao Gorja a,b, Chandana Lakshmi T. Meda a, Girdhar Singh Deora c,
Sunder Kumar Kolli d, Kishore V. L. Parsa a, K. Mukkanti b, Manojit Pal a,
⇑
a Dr. Reddy’s Institute of Life Sciences, University of Hyderabad Campus, Gachibowli, Hyderabad 500046, India
b Chemistry Division, Institute of Science and Technology, JNT University, Kukatpally, Hyderabad 500072, India
c The University of Queensland, School of Pharmacy, Brisbane, QLD 4072, Australia
d Department of Chemistry, Acharya Nagarjuna University, Guntur 522510, Andhra Pradesh, India
a r t i c l e i n f o
a b s t r a c t
Article history:
The linkage between dopamine D2 receptors and PDE activity via cAMP prompted us to design a series of
novel N-(3-arylprop-2-ynyl)substituted olanzapine derivatives as potential inhibitors of PDE4B. The
target compounds were conveniently prepared by using a simple and inexpensive method involving
Pd/C-mediated CAC bond forming reaction under Sonogashira conditions. A number of compounds were
synthesized by using this strategy in good yields. Some of the compounds showed promising inhibition of
PDE4B when tested in vitro that was supported by the docking studies.
Received 7 March 2014
Revised 2 April 2014
Accepted 3 April 2014
Available online 13 April 2014
Keywords:
Olanzapine
Alkyne
Ó 2014 Elsevier Ltd. All rights reserved.
PDE4
Docking
Schizophrenia being a complex neuropsychiatric disorder is
characterized by abnormalities in the perception of reality1 and
affects approximately 1% of the adult population worldwide.2,3
The antipsychotic medications are the mainstay of treatment for
most schizophrenic patients and can be classified into two major
classes for example, conventional (typical) and novel (atypical)
neuroleptic drugs. These drugs mainly suppress dopamine and
sometimes serotonin receptor activities. Clozapine that belongs
to the atypical class is a debenzepine based antipsychotic and
was found to be superior over other common antipsychotics.4 Its
(blockade) of D2 dopamine receptors which in turn causes an
increase level of cAMP (Fig. 1). This is also the outcome of inhibi-
tion of PDEs, a family of enzymes that degrade cyclic nucleotides
(Fig. 1). This linkage between dopamine D2 receptors and PDE
activity via cAMP is the basis for a possible therapeutic potential
for PDE inhibitors in schizophrenia.7b Indeed, increasing evidences
suggest that inhibition of PDE especially PDE4 and PDE10 can be
beneficial for treating the positive, negative, or cognitive symp-
toms associated with schizophrenia.7
Based on these observations and the fact that atypical antipsy-
chotics including olanzapine (A, Fig. 2) have been used as a first
line therapy to treat schizophrenia, we decided to focus on the
identification of new PDE4 inhibitors via structural modifications
of olanzapine.8 A diverse class of compounds have been explored
for the discovery of novel PDE4 inhibitors.9 For example, alkyne
derivatives B (Fig. 2) have been reported as inhibitors of PDE4.10
Thus, we hypothesized that combining some of the structural fea-
tures of A and B in a single molecule may lead to a new class of
compound C (Fig. 1) which may be explored for the identification
of novel PDE4 inhibitors11 thereby potential treatment of schizo-
phrenia. We initially became interested in the synthesis of C and
subsequent evaluation of their PDE4 inhibiting properties in vitro.
The designed target compounds were conveniently prepared by
using a Pd/C-mediated CAC bond forming reaction under Sono-
gashira type coupling conditions.12 The use of Pd/C–CuI–PPh3 as
binding to the D-2, D-4, 5-HT2A, and 5-HT2C along with D-1,
a
a-1,
-2, M-1, and H-1 receptors was found to be beneficial.5 A struc-
turally close analogue of clozapine called olanzapine (zyprexa)
belonging to the thienobenzodiazepine class has also been devel-
oped and found to possess similar pharmacological properties.6
While useful in treating some aspects of schizophrenia recent stud-
ies have suggested that currently available antipsychotic medica-
tions still possess considerable limitations. One of the many drug
strategies that have been proposed in recent years is based on
the fact that members of the phosphodiesterase (PDE) gene family
may play a role in the treatment of schizophrenia.7a For example
antipsychotic drugs are known to function through antagonism
⇑
Corresponding author. Tel.: +91 40 6657 1500; fax: +91 40 6657 1581.
E-mail address: manojitpal@rediffmail.com (M. Pal).
http://dx.doi.org/10.1016/j.tetlet.2014.04.009
0040-4039/Ó 2014 Elsevier Ltd. All rights reserved.

P. V. Babu et al. / Tetrahedron Letters 55 (2014) 3176–3180
3177
antipsychotic
drug
Dopamine
Dopamine
D1
D2
Gx
Gj
GDP
γ
α
α
γ
+
-
GDP
G
G
β
xα
GTP
GTP
j α
β
GTP
GDP
GDP
GTP
PPi
5'-AMP
PKA
(inactive)
c-AMP
ATP
inhibitor
PDE
PKA
(active)
Figure 1. Increase of cAMP levels by antipsychotic medication and inhibition of PDE:7b The activity of enzyme adenylyl cyclase (AC) is increased by G protein-coupled D1-
type dopamine receptors and decreased by D2 dopamine receptors. The antipsychotic drugs (believed to be antagonist of the D2 dopamine receptor) increase AC activity and
the AC converts ATP to cAMP. The cAMP levels are controlled by PDEs via degrading the cAMP molecule to 50-AMP. Inhibition of PDE activity by its inhibitors increases cAMP
levels.
Table 1
O
N
O
C
R5
Effect of reaction conditions on coupling of terminal alkyne 2 with 3aa
N
N
NRR1
R4
N
N
N
N
N
N
N
N
R7
R6
NH2
H2N
N
Pd-cat
CuI
S
S
N
I
S
R2
H
+
R8
R3
2
Base
EtOH
70oC,
N
Cl
C
Ar
A
B
non PDE4 inhibitor
and antip sychotic
olanzapine
reported inhibitor
new PDE4 inhibitor for
schizophrenia?
Cl
3a
4a
Figure 2. Design of new PDE4 inhibitors (C) based on olazapione A and reported
inhibitors B.
Entry
Pd-catalysts
Base
Time (h)
Yieldb (%)
1
2
3
4
5
6
10% Pd/C–PPh3
10% Pd/C–PPh3
10% Pd/C–PPh3
Et3N
Et3N
K2CO3
Et3N
Et3N
Et3N
6
8
10
10
8
90
89
10
9
10
60
an alternative but inexpensive catalyst system for the Sonogashira
type coupling has gained considerable interest.12 The use of Pd/C as
a catalyst offers several advantages. For example, Pd/C is stable,
easy to handle, and can be stored for a long period of time without
taking any extra precautions. Additionally, it can be separated eas-
ily from the product via simple filtration and is recyclable. More
importantly, in view of the use of Pd/C for hydrogenation in indus-
trial scale for over more than 100 years the Pd/C mediated coupling
reactions are amenable for large scale preparation. Thus, due to the
simplicity, advantages, and versatility of the Pd/C mediated CAC
bond forming reactions we decided to explore this strategy for
the synthesis of compound C (or 4) as shown in Scheme 1.
c
PPh3
d
10% Pd/C–PPh3
Pd(PPh3)2Cl2
6
a
All reactions were carried out using 2 (1 equiv), alkyne 3a (1 equiv), a Pd-cat-
alyst (0.016 equiv), PPh3 (0.125 equiv), CuI (0.02 equiv), and a base (2 equiv) in
EtOH (5.0 mL), at 70 °C.
b
Isolated yield.
The reaction was carried out without Pd/C.
The reaction was carried out without CuI.
c
d
entry 2) whereas a change of base from Et3N to K2CO3 suppressed
the product formation significantly (Table 1, entry 3). The reaction
also did not afford 4a in good yield in the absence of Pd/C or CuI
indicating their key role in the present reaction (Table 1, entries
4 and 5). The use of other Pd-catalyst for example, Pd(PPh3)2Cl2
was also examined (Table 1, entry 5). While the reaction proceeded
in this case the yield of product 4a was inferior to that of entry 1.
Thus the reaction condition of entry 1 was chosen for further study.
We then prepared a small library of compounds using the opti-
mized conditions (Table 2). A number of iodoarenes (3) were cou-
pled with the alkyne 2 in the presence of 10% Pd/C–PPh3–CuI to
give the desired products 4 in acceptable to good yields.14 Notably,
shorter reaction time was applied in the case of iodoarene 3d and
3h to avoid further intramolecular cyclization of the alkyne 4d and
4h generated in situ.8
The key starting material that is, the terminal alkyne 2 was syn-
thesized by treating olanzapine (1) with propargyl bromide in the
presence of NaH in THF (Scheme 1).13 Initially, the alkyne 2 was
reacted with 4-chloro-2-iodoaniline 3a in the presence of 10%
Pd/C–PPh3–CuI and Et3N in EtOH at 70 °C for 6 h (Table 1, entry
1). The desired product 4a was isolated in 90% yield. An increase
in the reaction time did not improve the product yield (Table 1,
N
N
N
N
N
N
N
N
Br
N
N
N
3
ArI (
)
10% Pd/C
PPh3, CuI
EtOH
70oC, 3-6h
S
NaH
THF
r.t. 6h
N
H
S
S
The PDE4B inhibitory potential of all the synthesized com-
Et N,
3
2
pounds was assessed in vitro at 30 lM by using a PDE4B enzyme
1
4
Ar
assay15 (Table 3). Rolipram16 a well known PDE4 inhibitor was
used as a reference compound in this assay. Compounds that
showed inhibition greater than 50% were considered as promising
Scheme 1. Synthesis of N-(3-phenylprop-2-ynyl)substituted olanzapine deriva-
tives 4.

3178
P. V. Babu et al. / Tetrahedron Letters 55 (2014) 3176–3180
Table 2
Table 2 (continued)
Pd/C-mediated synthesis of N-(3-arylprop-2-ynyl)substituted olanzapine derivatives
Entry
Iodoarene (3)
Time (h)
Product (4)
Yieldb (%)
(4)a
Entry
Iodoarene (3)
Time (h)
Product (4)
Yieldb (%)
N
NH2
N
N
I
N
N
N
N
N
S
Cl
3a
1
6
90
S
NH2
Cl
4f
I
N
HO
4a
N
NH2
3g
N
N
N
I
N
7
6
80
S
N
Br
3b
N
S
2
6
85
HO
NH2
Br
4g
Cl
N
N
4b
N
N
I
NH2
NHSO2Me
3h
N
I
S
8
3
78
N
N
NO2
Cl
3c
N
S
HN
3
6
93
O
S
NH2
NO2
O
4h
a
All reactions were carried out using 2 (1 equiv), alkyne 3 (1 equiv), 10% Pd/C
(0.016 equiv), PPh3 (0.125 equiv), CuI (0.02 equiv), and Et3N (2 equiv) in EtOH
(5.0 mL), at 70 °C.
4c
b
Isolated yield.
I
F
N
N
N
inhibitors. Accordingly, compounds 4c, 4d, 4g, and 4h were identi-
fied as hit molecules and 4h that showed ꢀ63% inhibition was
found to be the best. While rolipram showed ꢀ88% inhibition the
parent compound olanzapine however did not show any PDE4
inhibitory properties. It is therefore evident from Table 3 that a
non PDE4 inhibitor olanzapine has been converted into PDE inhib-
itors via introducing an appropriate 3-arylprop-2-ynyl moiety at
its central ring nitrogen. It is also evident that an anilide moiety
attached to the alkyne group played a key role in the inhibitory
activities for example, 4g and 4h. In a dose response study the
compound 4h showed inhibitory activities across all the dose
NHSO2Me
3d
N
S
4
3
90
F
HN
O
S
O
4d
NH2
N
I
N
N
Table 3
3e
Inhibition of PDE4B by compound 4 at 30
l
M
N
5
5.5
92
S
Entry
Compounds
Average % inhibition
SD
NH2
1
2
3
4
5
6
7
8
9
4a
4b
4c
4d
4e
4f
4g
4h
27.21
22.57
50.15
60.56
28.43
26.68
59.52
63.11
88.01
1.72
2.10
1.82
2.43
3.12
2.90
0.87
1.09
0.09
4e
I
6
5
85
3f
Rolipram
SD = standard deviation.

P. V. Babu et al. / Tetrahedron Letters 55 (2014) 3176–3180
3179
tested (31%, 23%, 15%, and 14% at 10, 3, 1, and 0.3
potential as a PDE4 inhibitor.
l
M) indicating its
compound 4h is the best among them. Thus, the sulfonamide NH
of 4h participated in two H-bond interactions with Asp 392 and
Thr 345 whereas the benzene ring of the benzenesulfonamide moi-
ety participated in a p–p stacking with Hie 234 (Fig. 3, For binding
orientation of 4h at the inhibitor binding pocket of PDE4B, see:
Figs. S-4 and S-5, ESI. A H-bond interaction with Tyr 233 and two
p–p stacking with Tyr 233 and Phe 446 were observed in case of
4g (see Figs. S-2, ESI). The amino group of 4c showed one H-bond-
ing with Asp 392 of PDE4B (see Fig. S-3, ESI).
In conclusion, for the first time N-(3-arylprop-2-ynyl)substi-
tuted olanzapine derivatives have been designed and synthesized
by using Pd/C-Cu mediated CAC bond forming reaction. One com-
pound showed PDE4B inhibitory properties in vitro and good inter-
actions with PDE4B protein in silico. Since linkage between
dopamine D2 receptors and PDE activity via cAMP can be the basis
for a possible therapeutic potential for PDE inhibitors in schizo-
phrenia, the present class of olanzapine derivatives has medicinal
value. The strategy presented here has potential for the discovery
of novel PDE4 inhibitors.
We then performed PDE4B docking studies using compounds
4c, 4g, and 4h to understand the nature of interactions of these
molecules with this protein in silico. The docking analysis of these
molecules was carried out using Maestro, version 9.217 imple-
mented from Schrödinger molecular modeling suite. The structural
coordinates of Phosphodiesterase 4B (PDB ID: 1XMY)18 were
obtained from the protein data bank (PDB). The GLIDE scores
obtained after docking of these molecules with PDE4B protein
are summarized in Table 4. The data shown in Table 4 clearly sug-
gests that these molecules bind well with the PDE4B whereas the
Table 4
Glide score and contributing XP parameters
Compound
GScore
LipophilicEvdW
PhobEn
HBond
Electro
4h
4g
4c
Rolipram
ꢂ8.36
ꢂ8.11
ꢂ5.62
ꢂ5.51
ꢂ6.03
ꢂ4.65
ꢂ1.34
ꢂ1.62
ꢂ1.37
ꢂ1.98
ꢂ0.89
ꢂ0.70
ꢂ0.32
ꢂ1.49
ꢂ0.34
ꢂ0.28
ꢂ0.82
ꢂ0.51
ꢂ5.89
ꢂ11.09
Acknowledgments
GScore: glide score.
LipophilicEvdW: Chemscore lipophilic pair term and fraction of the total protein–
ligand vdw energy.
HBond: Rewards for hydrogen bonding interaction between ligand and protein.
PhobEn: Hydrophobic enclosure reward.
The authors thank Prof. J. Iqbal for his support. D.R.G. thanks
DST, India for a Research Fellowship.
Supplementary data
Electro: Electrostatic reward.
Supplementary data associated with this article can be found, in
the online version, at http://dx.doi.org/10.1016/j.tetlet.2014.04.
009.
References and notes
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8. Gorja, D. R.; Mukherjee, S.; Meda, C. L. T.; Deora, G. S.; Kumar, K. L.; Jain, A.;
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11. For our earlier effort on PDE4 inhibitors, see: (a) Kumar, K. S.; Kumar, P. M.;
Kumar, K. A.; Sreenivasulu, M.; Jafar, A. A.; Rambabu, D.; Krishna, G. R.; Reddy,
C. M.; Kapavarapu, R.; Kumar, K. S.; Priya, K. K.; Parsa, K. V. L.; Pal, M. Chem.
Commun. 2011, 5010; (b) Reddy, G. R.; Reddy, T. R.; Joseph, S. C.; Reddy, K. S.;
Reddy, L. S.; Kumar, P. M.; krishna, G. R.; Reddy, C. M.; Rambabu, D.;
Kapavarapu, R.; Lakshmi, C.; Meda, T.; Priya, K. K.; Parsa, K. V. L.; Pal, M. Chem.
Commun. 2011, 7779; (c) Kumar, P. M.; Kumar, K. S.; Mohakhud, P. K.;
Mukkanti, K.; Kapavarapu, R.; Parsa, K. V. L.; Pal, M. Chem. Commun. 2012, 431;
(d) Sunke, R.; Adepu, R.; Kapavarapu, R.; Chintala, S.; Meda, C. L. T.; Parsa, K. V.
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G. R.; Kapavarapu, R.; Pal, M. Chem. Commun. 2013, 6716.
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14. General procedure for the preparation of compound 4: A mixture of compound
2 (1.0 equiv), 10% Pd/C (0.016 equiv), PPh3 (0.125 equiv), CuI (0.02 equiv), and
triethylamine (2 equiv) in ethanol (5 mL) was stirred at 25–30 °C for 30 min
under nitrogen. To this was added iodoarene (3) (1.0 equiv), and the mixture
was initially stirred at room temperature for 1 h and then at 70 °C for the time
indicated in Table 2. After completion of the reaction, the mixture was cooled
to room temperature, diluted with EtOAc (50 mL), and filtered through Celite.
The organic layers were collected, combined, washed with water (3 ꢁ 30 mL),
Figure 3. Binding mode and interactions of 4h at the inhibitor binding site of
PDE4B.

3180
P. V. Babu et al. / Tetrahedron Letters 55 (2014) 3176–3180
dried over anhydrous Na2SO4, filtered, and concentrated under low vacuum.
phase A: 0.1% Formic Acid in water, mobile phase B: ACN (gradient) (T/%B): 0/
10, 0.5/10, 4/95, 10/95, 10.5/10, 12/20; flow rate: 1.0 mL/min; UV 230 nm,
retention time 3.3 min. Compound 4h: light yellow solid; mp 204–206 °C; 1H
NMR (400 MHz, CDCl3): d 7.60 (s, 1H, ArH), 7.51 (s, 1H, ArH), 7.42–7.34 (m, 1H,
ArH), 7.20–7.09 (m, 4H, ArH), 6.34 (s, 1H, H-3 (ArH)), 4.51 (br s, 2H, ACH2C„),
4.25–4.03 (m, 3H, CH2 & NH), 3.94–3.79 (m, 2H, CH2), 3.26–3.11 (m, 2H, CH2),
3.04 (s, 3H, Me), 3.0–2.93 (m, 2H, CH2), 2.67 (s, 3H, Me), 2.38 (s, 3H, Me); 13C
NMR (100 MHz, CDCl3): d 156.7, 139.2, 138.4, 133.9, 133.2, 132.5, 131.5, 127.6,
125.3, 124.2, 123.5, 121.1, 120.7, 120.3, 118.2, 114.0, 112.6, 86.2 (AC„), 84.9
(AC„), 53.7 (CH2), 44.5 (CH2), 42.2 (CH2), 40.2 (CH2), 31.9 (NMe), 29.7
(MeSO2), 22.7 (CH2), 15.8 (Me); IR (KBr): 2920, 2843, 2228 (AC„CA), 1605,
1583, 1495, 1260 cmꢂ1; m/z (CI): 553.8 (M+1, 100%); HPLC: 95.8%; Column:
The crude residue was purified by column chromatography on silica gel using
methanol/dichloromethane to afford the desired product. Compound 4a:
brown solid; mp 198–200 °C; 1H NMR (400 MHz, CDCl3): d 7.25–7.20 (m,
1H), 7.11–6.98 (m, 4H), 6.97–6.90 (m, 1H), 6.59 (d, J = 8.4 Hz, 1H), 6.32 (s, 1H,
H-3), 4.54 (br s, 2H, ACH2C„), 3.74–3.60 (m, 4H, 2CH2), 2.75–2.67 (m, 2H,
CH2), 2.63–2.56 (m, 2H, CH2), 2.41 (s, 3H, Me), 2.35 (s, 3H, Me); 13C NMR
(100 MHz, CDCl3): d 157.0, 154.2, 145.9, 144.5, 142.6, 132.4, 132.1, 130.6,
127.5, 126.9, 124.9, 123.8, 121.1, 118.1, 115.8, 114.4, 107.3, 89.8 (AC„), 83.6
(AC„), 54.4 (CH2), 45.9 (CH2), 42.3 (CH2), 31.5 (CH2), 29.6 (NMe), 20.1 (CH2),
15.8 (Me); IR (KBr): 2930, 2853, 2257 (AC„CA), 1590, 1421, 1248 cmꢂ1; m/z
(CI): 475.4 (M+1, 100%); HPLC: 95.3%; column: X Bridge C-18 75 * 4.6 mm,
3.5
l
m, mobile phase A: 0.1% formic acid in water, mobile phase B: CH3CN
Symmetry C-18 75 * 4.6 mm 3.5 lm, mobile phase A: 0.1% TFA in water, mobile
(gradient) T/B%: 0/10, 0.5/10, 4/95, 10/95, 10.5/10, 12/10; flow rate: 1.0 mL/
min; UV 230 nm, retention time 3.2 min. Compound 4b: light brown solid; mp
182–184 °C; 1H NMR (400 MHz, CDCl3): d 7.38 (d, J = 2.4 Hz, 1H, ArH), 7.24–
7.16 (m, 2H, ArH), 7.11–6.97 (m, 3H, ArH), 6.56 (d, J = 8.4 Hz, 1H, ArH), 6.35 (s,
1H, H-3 (ArH)), 4.55 (br s, 2H, ACH2C„), 4.15 (s, 2H, NH2), 3.65 (s, 4H, 2CH2),
2.71–2.52 (m, 4H, 2CH2), 2.42 (s, 3H, Me), 2.38 (s, 3H, Me); 13C NMR (100 MHz,
CDCl3): d 157.1, 153.9, 147.2, 144.3, 144.3, 142.7, 137.0, 134.0, 132.5, 127.6,
125.0, 123.7, 121.2, 117.9, 115.7, 109.0, 108.0, 91.2 (AC„), 82.1 (AC„), 54.7
(CH2), 46.1 (CH2), 42.1 (CH2), 34.6 (CH2), 29.6 (NMe), 22.6 (CH2), 15.8 (Me); IR
(KBr): 2926, 2848, 2794, 2253 (AC„CA), 1579, 1145 cmꢂ1; m/z (CI): 521.4
phase B: CH3CN (gradient) T/B%: 0/10, 0.5/10, 6/95, 10/95, 10.5/10, 12/10; flow
rate: 1.0 mL/min; UV 260 nm, retention time 4.0 min.
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(M+1, 100%), HPLC: 96.8%; column: Symmetry C-18 75 ꢁ 4.6 mm 3.5
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