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that this behavior can be attributed to potent CYP450 inhibition,
with concentrations of 6 and 7 exceeding Km for the isoform
responsible for the metabolism of these compounds (saturable
clearance) at relatively low doses (unpublished results). Therefore,
work was initiated to identify a developable GR compound which
would avoid the liabilities associated with both 6 and 7 while
maintaining their promising pharmacological profiles (see Fig. 1).
We suspected that the metabolic liability of 6 and 7 may reside
within the 2-acylamino-1,3,4-thiadiazole moiety. The X-ray co-
crystal structure of GR ligand-binding domain (LBD) bound inda-
zole 2-acyl-1,3,4-aminothiadiazole ligand was useful in our efforts
to identify surrogates for this functionality.8a It revealed that
Asn564 and Gln642 play a role in binding through a three-centered
hydrogen bond network to the 2-acyl-1,3,4-aminothiadiazole moi-
ety as shown in the left panel of Figure 2. Specifically, Asn564
engages in two H-bonds, one to the amide NH and another to
one nitrogen of the thiadiazole, while Gln642 forms an additional
H-bond with the amide carbonyl oxygen. These interactions effec-
tively mimic the engagement of both residues within the steroidal
C-11 b hydroxyl and D ring C-17 substituents of 1 and 2.9 We envi-
sioned that both acyclic imide and acylurea structures could mimic
the three-centered hydrogen bond network of thiazole and thiadi-
azole amide ligands. Docking the acyclic acylurea into the pub-
lished crystal structure fit very well in the GR LBD pocket as
shown in the right panel of Figure 2. Herein we report our results
on synthesis and biological characterization of the acyclic imide
and acylurea GR ligands.
The synthesis of a series of acyclic imides is outlined in
Scheme 1. The preparation of 5H-chromeno[2,3-b]pyridine carbox-
ylic acid 8a has been described before.7 Suzuki–Miyaura coupling
of 8a,b with aryl boronate provided 2-aryl-5H-chromeno[2,3-
b]pyridine carboxylic acid 9. Following the method of Andrus
et al.,10 activation of the acid 9 with carbodiimide followed by
treatment with pentafluorophenol gives an activated pentafluor-
ophenyl ester 10. Condensation of ester 10 with an amide anion,
which is separately generated from treatment of an alkyl or cyclo-
alkyl amide with an appropriately strong base such as sodium
hexamethyl-disilazide gives acyclic imides 12 in 65% yield. Alter-
natively, the acyclic imides can also be synthesized in the following
two step sequence. The carboxylic acid 8 was first converted into a
primary amide 11, which was treated with sodium hexamethyldi-
silazide to generate an amide anion, and then condensation with
an acyl chloride gives imides 13ꢀ18 in 66–70% yield (Scheme 1).
The synthesis of N-methyl acylurea is outlined in Scheme 2. The
acid 8 was converted into a primary amide 19, using HATU as an
ammonium chloride as an ammonium source. Condensation of
19 with methyl carbamoyl chloride in the presence of sodium hex-
amethyldisilazide or sodium hydride gives N-methyl acylurea
compound 20 in 80% yield.
The structure of the N-methyl acylurea 20 was confirmed by an
X-ray crystal structure (Fig. 3). In the similar manner, the synthesis
of N,N-dimethyl acylurea 21 can be achieved as shown in Scheme 3.
Arylation of 20 provided 22.
Another approach for preparation of secondary acylureas is
shown in Scheme 4. Condensation of 11 with isocyanate in an inert
solvent such as toluene, at 90°C gives compounds 23–25 in 65–82%
yields.
One method for synthesis of primary acylureas involved
cleavage of the para-methoxy benzyl (PMB) protected secondary
acylurea 25 with neat trifluoroacetic acid (TFA), or 2,3-dichloro-
5,6-dicyano-1,4-benzoquinone (DDQ) to provide the primary
acylurea 26 in an excellent yield (Scheme 5).
The primary acylurea can also be prepared according to the
method of Xiao et al.11 Therefore, conversion of carboxylic acid 8
to an acylcyanamide 28 was effected using BOP as an activation
agent, in the presence of diisopropylethyl amine and cyanamide.
The acylcyanamide 28 proved to be stable in the subsequent
Suzuki coupling reaction. Thus, condensation with aryl boronate,
in the presence of tetrakis catalyst and potassium phosphate triba-
sic solution, gives the 2-aryl-5H-chromeno[2,3-b]pyridine acylcya-
namide 29. The acyl-cyanamide 30 can be hydrolyzed to primary
acylurea 30 under strongly acidic conditions. Thus, treatment with
4 N HCl in water provided the useful acid intermediate 30 in 86%
yield. The primary acylureas bearing different benzamides 31–36
were readily prepared by condensation of 30 with various amines
as shown in Scheme 6.
The in vitro assays used to characterize biological activities of
the GR ligands including nuclear receptor binding, transrepression
in an A549 cell line [AP-1 and E-selectin (NFjB dependent)], and
transactivation in GAL-4 reporter in a HeLa cell line [NP-1 agonist
assay] have been previously reported.7
GR binding and functional activity for acyclic imides and acylu-
reas are summarized in Table 1. The 2-acylamino-1,3,4-thiadiazole
of 6 (GR Ki = 1.9 nM)7 was simply replaced with an acyclic imide to
get compound 13 (GR Ki = 69.4 nM). A significant loss of of GR
binding affinity and functional activities were observed. While it
is not a trend when the left hand amide was modified. The acyclic
imide compounds 14 and 15, both of which are bearing a different
amide, do show good GR binding affinity and functional activities
in both transrepression and transactivation assays (Table 1). The
GR selectivity over PR is also affected by the left hand amide.
Among three methyl imides 13–15, the morpholine amide 15
showed the least PR selectivity. However, the PR selectivity can
be improved by varying the methyl imide with others, such as imi-
des 16–18. It is also noted that SAR of the acyclic imides is very
sensitive. The imides 16–18 showed weaker human whole blood
(hWB) activity, which is consistent with their weak transactivation
activity. The major issue for further development the imide series
is hydrolytic instability of acyclic imides in low pH. Under acidic
conditions, the acyclic imide can be readily hydrolyzed back to a
primary amide.
activation reagent, diisopropylethyl amine as
a base and
OH
O
O
S
S
O
OH
R'
HO
N
H
N
N
N
H
H
H
R
O
HO
3
4
1 R = F, R' = Me, dexamethasone (dex)
2 R = H, R' = H, prednisolone (pred)
The relatively weak GR binding affinity of the N,N-dimethyl
acylurea compound 21 was improved by removing one methyl
group to N-monomethyl acylurea 22. This can be rationalized
based on what is likely a requirement for a cyclic hydrogen bond
between the terminal NH and the carbonyl oxygen adjacent to
the quaternary carbon, maintaining the acylurea in the most pro-
ductive trans conformation. Accordingly, the GR binding affinity
of 22 increased more than 10-fold relative to 21. Like compound
22, other secondary acylureas 23-25 also exhibited potent GR bind-
ing affinity and transrepression activity (AP-1 and E-selectin).
O
S
O
S
N
N
N
N
N
N
H
H
R
N
N
O
HO
O
6 R = Me, BMS-776532
7 R = Et, BMS-791826
5
O
Figure 1. Synthetic glucocorticoid agonists.