New Neplanocin Analogues
J ournal of Medicinal Chemistry, 1996, Vol. 39, No. 12 2397
mixture was evaporated. To the residue was added EtOAc
(50 mL), and the resulting insoluble material was filtered off.
The filtrate was washed with water (10 mL) and filtered
through Whatman 1PS filter paper, and the filtrate was
evaporated. The residue was purified by flash chromatography
(silica gel, CHCl3/CH3OH, 20:1) to give 18 as a crystalline solid
(85 mg, 25%). An analytical sample was obtained by recrys-
tallization from hexane: mp 148-149 °C; 1H NMR (270 MHz,
CDCl3) 7.85 (d, 1 H, H-2, J ) 5.9 Hz), 7.68 (s, 1 H, H-8), 6.82
(d, 1 H, H-3, J ) 5.9 Hz), 5.71 (br s, 1 H, H-5′), 5.31 (br s, 1 H,
H-1′), 5.28 (br s, 2 H, NH2), 5.23 (d, 1 H, H-3, J ) 5.9 Hz),
4.50 (d, 1 H, H-2′, J ) 5.9 Hz), 3.91 (m, 2 H, H-7′), 2.54 (m, 2
H, H-6′), 1.47, 1.35 (each s, each 3 H, isopropyl-CH3), 0.90 (s,
9 H, t-Bu), 0.09 (s, 6 H, SiCH3); MS (FAB) m/ z 431 (MH+).
Anal. (C22H34N4O3Si) C, H, N.
1PS filter paper, and the filtrate was concentrated to give 21
as a solid (145 mg, 64%): 1H NMR (270 MHz, CDCl3) 7.77 (s,
1 H, H-8), 5.71 (br s, 1 H, H-5′), 5.42 (br s, 2 H, NH2), 5.36 (d,
1 H, H-3′, J ) 5.6 Hz), 5.36 (s, 1 H, H-1′), 4.59 (d, 1 H, H-2′,
J ) 5.6 Hz), 3.91 (m, 2 H, H-7′), 3.58 (dd, 1 H, OH, J ) 8.3,
3.3 Hz), 2.61 (m, 2 H, H-6′), 1.49, 1.37 (each s, each 3 H,
isopropyl-CH3); MS (FAB) m/ z 352 (MH+).
9-[(1R,2S,3R)-2,3-Dih yd r oxy-4-(2-h yd r oxyet h yl)-4-cy-
clop en ten -1-yl]gu a n in e (5). A mixture of 21 (45 mg, 0.13
mmol) in 2 N HCl (6 mL) was stirred at room temperature for
2 h, and then the mixture was heated under reflux for 2 h.
The solvent was evaporated, and a small amount of water was
added to the residue, and the solvent was evaporated again.
After addition of water (5 mL) to the residue, the mixture was
neutralized with Et3N and then evaporated. To the residue
was added CHCl3, and the resulting insoluble solid was
collected by filtratation to give 5 (37 mg, 99%). An analytical
9-[(1R,2S,3R)-2,3-Dih yd r oxy-4-(2-h yd r oxyet h yl)-4-cy-
clop en ten -1-yl]-3-d ea za a d en in e (4). A solution of 18 (50
mg, 0.12 mmol) and TBAF (1 M in THF, 140 µL, 0.14 mmol)
in THF (2 mL) was stirred at room temperature for 1 h. The
resulting mixture was evaporated, and the residue was
partitioned between CHCl3 (100 mL) and water (10 mL). The
organic layer was washed with saturated NaHCO3 (20 mL)
and water (20 mL) and filtered through Whatman 1PS filter
paper, and the filtrate was evaporated. The residue was
purified by flash chromatography (silica gel, CHCl3/MeOH, 15:
1) to give a crystalline solid which was dissolved in HCl/CH3-
OH (8.9 M, 2 mL), and the mixture was stirred at room
temperature for 1 h. The solvent was evaporated, the residue
was dissolved in water (2 mL), and the solution was purified
by Dowex-1 column (OH-, 1 × 1 cm, eluted with 20% MeOH)
to give 4 as a crystalline solid (21 mg, 66%): mp 214-216 °C;
sample was obtained by recrystallizing from water: mp 203-
1
205 °C; [R]22 ) +7.99 (c ) 0.05, H2O); H NMR (270 MHz,
D
CD3OD) 8.93 (br s, 1 H, H-8), 5.77 (br s, 1 H, H-5′), 5.45 (m, 1
H, H-1′), 4.62 (d, 1 H, H-3′, J ) 5.6 Hz), 4.34 (dd, 1 H, H-2′, J
) 5.6, 4.6 Hz), 3.82 (t, 2 H, H-7′, J ) 6.3 Hz), 2.54 (br t, 2 H,
H-6′, J ) 6.3 Hz); MS (FAB) m/ z 294 (MH+); UV λmax 253
(H2O), 256 (0.1 N HCl), 268, 256 nm (0.1 N NaOH). Anal.
(C12H15N5O4‚H2O) C, H, N.
1-[(1R,2S,3R)-2,3-(Isop r op ylid en ed ioxy)-4-[2-[(ter t-bu -
tyldim eth ylsilyl)oxy]eth yl]-4-cyclopen ten -1-yl]u r acil (22).
Compound 22 was prepared as described above for 19, with
uracil instead of 2-amino-6-chloropurine. After purification
by flash chromatography (silica gel, hexane/acetone, 4:1), 22
was obtained as a crystalline solid (201 mg, 35%): mp 166-
167 °C; 1H NMR (270 MHz, CDCl3) 8.54 (br s, 1 H, NH), 7.08
(d, 1 H, H-6, J ) 7.9 Hz), 5.63 (dd, 1 H, H-5, J ) 2.3, 7.9 Hz),
5.45 (br s, 1 H, H-5′), 5.42 (br s, 1 H, H-1′), 5.14 (br d, 1 H,
H-3′, J ) 5.6 Hz), 4.47 (d, 1 H, H-2′, J ) 5.6 Hz), 3.87 (m, 2 H,
H-7′), 2.49 (m, 2 H, H-6′), 1.34, 1.35 (each s, each 3 H,
isopropyl-CH3), 0.89 (s, 9 H, t-Bu), 0.07 (s, 6 H, SiCH3); MS
(FAB) m/ z 409 (MH+). Anal. (C20H32N2O5Si) C, H, N.
1-[(1R,2S,3R)-2,3-(Isop r op ylid en ed ioxy)-4-[2-[(ter t-bu -
t y ld im e t h y ls ily l)o x y ]e t h y l]-4-c y c lo p e n t e n -1-y l]t h y -
m in e (23). Compound 23 was prepared as described above
for 19, with thymine instead of 2-amino-6-chloropurine. After
purification by flash chromatography (silica gel, CHCl3/
acetone, 5:1), 23 was obtained as a crystalline solid (192 mg,
31%): mp 43-45 °C; 1H NMR (270 MHz, CDCl3) 8.95 (br s, 1
H, NH), 6.82 (d, 1 H, H-6, J ) 1.3 Hz), 5.44 (br s, 1 H, H-5′),
5.41 (br s, 1 H, H-1′), 5.17 (br d, 1 H, H-3′, J ) 5.9 Hz), 4.49
(d, 1 H, H-2′, J ) 5.9 Hz), 3.88 (m, 2 H, H-7′), 2.49 (m, 2 H,
H-6′), 1.88 (d, 3 H, CH3, J ) 1.3 Hz), 1.43, 1.35 (each s, each
3 H, isopropyl-CH3), 0.90 (s, 9 H, t-Bu), 0.08 (s, 6 H, SiCH3);
MS (FAB) m/ z 423 (MH+). Anal. (C21H34N2O5Si‚1/2H2O) C,
H, N.
1-[(1R,2S,3R)-2,3-(Isop r op ylid en ed ioxy)-4-(2-h yd r oxy-
eth yl)-4-cyclop en ten -1-yl]th ym in e (24). A mixture of 23
(50 mg, 0.12 mmol) and TBAF (1 M in THF, 142 µL, 0.14
mmol) in THF (2 mL) was stirred for 4 h and then evaporated.
The residue was dissolved in water (30 mL) and washed with
CHCl3 (5 mL × 3). Activated charcoal (1 g) was added to the
aqueous layer, and then the charcoal was packed in a column
which was washed with water and eluted with 50% MeOH
followed by MeOH. The fractions containing 24 were evapo-
rated, a small amount of hot MeOH was added to the residue,
and the resulting insoluble material was filtered off. The
filtrate was evaporated, and the residue was purified by flash
chromatography (silica gel, CHCl3/MeOH, 10:1) to give 24 as
a crystalline solid (29 mg, 79%): mp 62-63 °C; 1H NMR (270
MHz, CDCl3) 9.47 (br s, 1 H, NH), 6.91 (d, 1 H, H-6, J ) 1.3
Hz), 5.46 (br s, 1 H, H-5′), 5.25 (d, 1 H, H-3′, J ) 5.6 Hz), 5.19
(br s, 1 H, H-1′), 4.64 (d, 1 H, H-2′, J ) 5.6 Hz), 3.85 (br s, 2
H, H-7′), 2.74 (br s, 1 H, OH), 2.55 (m, 2 H, H-6′), 1.88 (s, 3 H,
CH3), 1.46, 1.34 (each s, each 3 H, isopropyl-CH3); MS (FAB)
m/ z 309 (MH+). Anal. (C15H20N2O5‚H2O) C, H, N.
[R]28 -123.5 (c ) 0.10, H2O); 1H NMR (270 MHz, CD3OD)
D
8.07 (s, 1 H, H-8), 7.67 (d, 1 H, H-2, J ) 5.9 Hz), 6.93 (d, 1 H,
H-3, J ) 5.9 Hz), 5.84 (br s, 1 H, H-5′), 5.34 (m, 1 H, H-1′),
4.54 (br d, 1 H, H-3′, J ) 5.6 Hz), 4.19 (dd, 1 H, H-2′, J ) 5.6,
5.6 Hz), 3.84 (br t, 2 H, H-7′, J ) 6.3 Hz), 2.54 (br t, 2 H, H-6′,
J ) 6.3 Hz); MS (FAB) m/ z 277 (MH+); HR-MS (FAB) calcd
for C13H17N4O3 277.130, found 277.128. UV λmax 262 (H2O),
262 (0.1 N HCl), 267 nm (0.1 N NaOH). Anal. (C13H16N4O3‚1/
4H2O) C, H, N.
2-Am in o-6-ch lor o-9-[(1R,2S,3R)-2,3-(isop r op ylid en e-
d ioxy)-4-[2-[(ter t-bu tyl-d im eth ylsilyl)oxy]eth yl]-4-cyclo-
p en ten -1-yl]p u r in e (19) a n d 2-Am in o-6-ch lor o-7-[(1R,2S,-
3R)-2,3-(isop r op ylid en ed ioxy)-4-[2-[(ter t-b u t yld im et h -
ylsilyl)oxy]eth yl]-4-cyclop en ten -1-yl]p u r in e (20). A mix-
ture of 15 (874 mg, 2.23 mmol), 2-amino-6-chloropurine (1.54
g, 9.09 mmol), K2CO3 (1.26 g, 9.12 mmol), and 18-crown-6 (600
mg, 2.23 mmol) in DMF (35 mL) was stirred at room temper-
ature for 9 days. The solvent was evaporated, EtOAc (100 mL)
was added to the residue, and the resulting insoluble material
was filtered off. The filtrate was washed with water (20 mL)
and filtered through Whatman 1PS filter paper, and the
filtrate was evaporated. The residue was purified by flash
chromatography (silica gel, CHCl3/acetone, 10:1) to give 19
(crystalline solid, 567 mg, 55%) and 20 (crystalline solid, 122
mg, 12%), respectively. 19: mp 228-229 °C; 1H NMR (270
MHz, CDCl3) 7.63 (s, 1 H, H-8), 5.60 (br s, 1 H, H-5′), 5.44 (br
s, 1 H, H-1′), 5.26 (m, 3 H, H-3′ and NH2), 4.56 (d, 1 H, H-2′,
J ) 5.3 Hz), 3.89 (m, 2 H, H-7′), 2.53 (m, 2 H, H-6′), 1.46, 1.37
(each s, each 3 H, isopropyl-CH3), 0.89 (s, 9 H, t-Bu), 0.08 (s,
6 H, SiCH3); MS (FAB) m/ z 466 (MH+); UV λmax 310, 248, 223
nm (MeOH). Anal. (C21H32ClN5O3Si) C, H, N. 20: mp 145-
146 °C; 1H NMR (270 MHz, CDCl3) 7.86 (s, 1 H, H-8), 5.76 (br
s, 1 H, H-5′), 5.63 (br s, 1 H, H-1′), 5.09 (d, 1 H, H-3′, J ) 5.3
Hz), 5.03 (br s, 2 H and NH2), 4.45 (d, 1 H, H-2′, J ) 5.3 Hz),
3.84 (m, 2 H, H-7′), 2.48 (m, 2 H, H-6′), 1.37, 1.28 (each s, each
3 H, isopropyl-CH3), 0.84 (s, 9 H, t-Bu), 0.03 (s, 6 H, SiCH3);
MS (FAB) m/ z 466 (MH+); UV λmax 325, 225 nm (MeOH). Anal.
(C21H32ClN5O3Si‚H2O) C, H, N.
2-Am in o-6-ch lor o-9-[(1R,2S,3R)-2,3-(isop r op ylid en e-
dioxy)-4-(2-h ydr oxyeth yl)-4-cyclopen ten -1-yl]pu r in e (21).
A solution of 19 (300 mg, 0.65 mmol) and TBAF (1 M in THF,
780 µL, 0.78 mmol) in THF (15 mL) was stirred at room
temperature for 2.5 h. The solvent was evaporated, and the
residue was partitioned between CHCl3 (50 mL) and water (10
mL × 3). The organic layer was filtered through Whatman
1-[(1R,2S,3R)-2,3-Dih yd r oxy-4-(2-h yd r oxyet h yl)-4-cy-
clop en ten -1-yl]th ym in e (6). A solution of 24 (73 mg, 0.24
mmol) in 70% HCOOH (3 mL) was stirred at 70 °C for 40 h,
and then the solvent was removed. To the residue was added