Solid phase synthesis of peptides
6-(4-Cyanobiphenyl-4∞-yloxy)hexanoyl chloride 5. The acid 4
(3.00 g, 9.70 mmol) was stirred with thionyl chloride (10 cm3,
137 mmol) for 3 h at room temp. in a flask fitted with a
calcium chloride guard tube, giving a clear yellow solution.
This solution was then gently heated for 90 min to expel any
remaining gases from solution. The excess thionyl chloride was
then removed under reduced pressure, and the oily residue co-
evaporated several times with dry diethyl ether. The acid
chloride was then used in the next step without further
Oligopeptides were synthesised on a Novasyn Crystal solid
phase peptide synthesiser using Novasyn PR500 resin and
PyBOP coupling chemistry. Typically, each residue was double
coupled using a two-fold excess of amino acid. Cleavage of the
peptide from the resin was with 10% TFA in CH Cl for
2
2
90 min.
Liquid crystal characterisation of peptides
purification; n /cm−1 (selected band) 1805.
max
Hot stage polarised optical microscopy was performed either
on an Olympus CH-2 microscope fitted with a Mettler FP-5
hot-stage, JVC TK-1085E colour video attachment and a Sony
UP-3000P colour video printer, or on an Olympus Vanox
microscope fitted with a Linkam TH600 hot-stage and a
Linkam PR600 thermal controller. Microscope slides were
pretreated with a homogeneous aligning agent.
Copper complex of e-[6-(4-cyanobiphenyl-4∞-yloxy)hexanam-
ido]--lysine 6. To a boiling solution of -lysine monohydro-
chloride (3.54 g, 19.4 mmol) in water (60 cm3), was added basic
copper() carbonate (9.43 g, 42.7 mmol) over a period of
10 min; the addition caused effervescence and the supernatant
solution turned bright blue. The mixture was boiled for a
further 10 min, cooled to room temp. and the excess copper()
carbonate filtered off. A solution of sodium hydroxide (0.78 g,
19.4 mmol) in water (5 cm3) was then added to the bright blue
filtrate and the solution cooled to 0 °C on an ice-bath. A
solution of 5 (9.7 mmol) in dry dichloromethane (DCM)
(30 cm3) was added to the rapidly stirred solution over a
period of 2.5 h, the temperature being maintained at 0 °C, and
the mixture then stirred for a further 4.5 h at the same
temperature. The lilac coloured precipitate which formed was
filtered off, washed with ethanol, water and diethyl ether, and
then air-dried (4.55 g, 100% technical yield). Further purifi-
Syntheses
L
-Lysine derivative 8. Methyl 6-bromohexanoate 2. 6-
Bromohexanoic acid (22.00 g, 113 mmol), concentrated sulfuric
acid (3 cm3) and methanol (50 cm3) were refluxed for 3 h and,
after cooling, excess methanol was removed under reduced
pressure. Portions of deionised water (100 cm3) and chloroform
(100 cm3) were added to the colourless liquid residue, and the
organic layer separated. The aqueous layer was further
extracted with portions of chloroform (3×50 cm3). The organic
layers were combined, washed with 5% aqueous sodium
hydrogen carbonate (100 cm3), then water (50 cm3), dried over
magnesium sulfate and the chloroform removed under reduced
pressure. The crude liquid residue was distilled under reduced
pressure and 2 collected as a colourless liquid (17.16 g,
73%), bp 40 °C at 0.01 mbar. (Found: C, 40.6; H, 6.6; Br, 37.7.
C H BrO requires C, 40.2; H, 6.3; Br, 38.2%); n /cm−1
cation was not carried out; n /cm−1 3430, 3306, 2936, 2865,
max
2225, 1620, 1604, 1541, 1496, 1390, 1291, 1253, 1181 and 822.
e-[6-(4-Cyanobiphenyl-4∞-yloxy)hexanamido]--lysine 7. The
copper complex 6 (94.43 g, 4.73 mmol) was stirred with 10%
aqueous ethylenediaminetetraacetic acid (EDTA) disodium salt
(200 cm3) for 20 h at room temp. The precipitate which formed
was filtered off and again stirred with 10% aqueous EDTA
disodium salt (200 cm3) for a further 20 h at room temp. After
filtering, the solid was washed well with water and dried in
vacuo at 50 °C for 64 h (3.70 g, 89% technical yield), mp 285 °C.
7
13
2
max
2947, 2865, 1740, 1436, 1362, 1255, 1202, 1173, 1122 and 1000;
d (CDCl ) 1.40–1.52 (m, 2H), 1.57–1.76 (m, 2H), 1.78–1.98
(m, 2H), 2.33 (t, 2H), 3.38 (t, 2H) and 3.66 (s, 3H).
H
3
Methyl 6-(4-cyanobiphenyl-4∞-yloxy)hexanoate 3. The ester 2
(8.80 g, 42.1 mmol), 4-cyano-4∞-hydroxybiphenyl (8.21 g,
42.1 mmol) and anhydrous potassium carbonate (5.82 g,
42.1 mmol) were stirred in DMF (20 cm3) for 24 h in a flask
fitted with a calcium chloride guard tube. The viscous yellow
slurry which formed was poured into water (200 cm3) and the
resultant white precipitate filtered off and washed with water.
The crude product was dried over phosphorus pentoxide for
48 h, and then recrystallised from 80% aqueous ethanol
(175 cm3) giving 3 as a white powder (9.90 g, 73%), mp
88–89 °C (lit.,16 80–81 °C). (Found: C, 74.4; H, 6.8; N, 4.3.
C H NO requires C, 74.3; H, 6.6; N, 4.3%); n /cm−1 2947,
Further purification was not carried out; n /cm−1 3310,
max
3071, 2938, 2866, 2229, 1638, 1606, 1582, 1543, 1521, 1494,
1407, 1289, 1253, 1181 and 824.
e-[6-(4-Cyanobiphenyl-4∞-yloxy)hexanamido]-N-fluorenyl-
methoxycarbonyl--lysine 8. Compound 7 (3.00 g, 6.86 mmol)
was suspended in a mixture of 10% aqueous sodium carbonate
(60 cm3) and dioxane (40 cm3), and the mixture stirred for 1 h
at room temp. A solution of fluorenyl chloroformate (1.95 g,
7.54 mmol) in dioxane (20 cm3) was then added to the stirred
mixture; precipitation of a white solid was observed approxi-
mately 5 min after the addition. After stirring for a further
24 h, the mixture was poured into water (75 cm3) giving a
turbid solution. Acidification to pH 3 with 20% aqueous
hydrochloric acid yielded a sticky white material which was
extracted into chloroform (3×150 cm3). The organic layers
were combined, washed with water (150 cm3) and dried over
magnesium sulfate. The solvent was removed under reduced
pressure and the crude product recrystallised from chloroform–
light petroleum, giving 8 as a white powder (2.05 g, 45%), mp
154–156 °C. (Found: C, 72.4; H, 6.4; N, 6.1. C H N O
20 21
3
max
2869, 2222, 1722, 1600, 1497, 1473, 1294, 1272, 1254, 1181,
1031 and 829; d (CDCl ) 1.46–1.92 (m, 6H) 2.37 (t, 2H), 3.68
(s, 3H), 4.02 (t, 2H), 6.98 (m, 2H) and 7.50–7.73 (m, 6H).
H
3
6-(4-Cyanobiphenyl-4∞-yloxy)hexanoic acid 4. The ester 3
9.00 g, 27.8 mmol) and potassium hydroxide (16.00 g,
285 mmol) were stirred in ethanol (150 cm3) for 3 h at room
temp. in a flask fitted with a calcium chloride guard tube. The
resultant yellow slurry was poured into iced-water (450 cm3),
the mixture allowed to warm to room temp. and then neutral-
ised with concentrated sulfuric acid. The white precipitate was
filtered off, washed with water and dried over calcium chloride.
Recrystallisation from ethanol (400 cm3) gave 4 as a white
powder (5.73 g, 67%), K 163.7 °C I 157.1 °C N 134.3 °C (from
DSC) (lit.,16 mp 165 °C) (Found: C, 73.6; H, 6.2; N, 4.1.
C H NO requires C, 73.8; H, 6.2; N, 4.5%); n /cm−1 2942,
40 41
3 6
requires C, 72.8; H, 6.3; N, 6.4%); n /cm−1 3327, 3065, 2942,
max
2862, 2224, 1751, 1694 (sh. at 1721), 1602, 1544, 1494, 1451,
1253, 1181, 821, 760 and 741; d (DMSO) 1.06–1.84 (m, 12H),
2.07 (t, 2H), 3.02 (m, 2H), 3.84–4.06 (m, 3H), 4.18–4.38 (m,
3H) and 6.93–8.35 (m, 18H); M 659.8; found, m/z 682.5
(M+Na+) and 660.7 (M+H+).
H
19 19
3
max
2869, 2229, 1703, 1601, 1445, 1251, 1183, 1076, and 820; d
L
-Glutamic acid derivative 15. 6-(4-Cyanobiphenyl-4∞-yloxy)
H
([2H ]THF) 1.30–1.88 (m, 6H), 2.25 (t, 2H), 4.04 (t, 2H) and
6.98–7.88 (m, 8H).
hexanol 10. 4-Cyano-4∞-hydroxybiphenyl (6.43 g, 32.9
mmol), potassium hydroxide (1.85 g, 32.9 mmol) and a few
8
J. Mater. Chem., 1997, 7(10), 1977–1983
1981