ACS Chemical Neuroscience
Research Article
phenyltetrahydrooxazolo[4,3-c][1,4]oxazin-8(3H)-one (1 g, 2.1
mmol) in CH2Cl2 was added pyrrolidine (0.89 mL, 10.7 mmol). The
resulting mixture was stirred overnight at room temperature. After
warming to 50 °C for 2 h, the reaction was cooled and concentrated in
vacuo. The residue was dissolved in MeOH, treated with 2 M HCl, and
heated to reflux for 2 h. Completion of the reaction required adding
more 2 M HCl and stirring 2 more hours. The reaction was cooled and
concentrated in vacuo. The crude material was diluted with water and
extracted with ether. The aqueous layer was treated with saturated
NaHCO3 until it was slightly basic. The mixture was extracted with 3 ×
1:1 EtOAc/ether. The combined organic extracts were washed with
water and dried over MgSO4. Filtration through flash silica gel with 5%
MeOH/CH2Cl2 eluent provided the title compound (0.6 g, 1.5 mmol,
2-(2,3-Dihydro-1H-inden-2-yl)-N-((1R,2R)-1-hydroxy-3-(pyrroli-
din-1-yl)-1-(4-(trifluoromethoxy)phenyl)propan-2-yl)acetamide
(17). Compound 17 was prepared by procedures analogous to those
described for the preparation of 15. 1H NMR (400 MHz, chloroform-
d) δ 7.40−7.35 (m, 2H), 7.21−7.19 (m, 2H), 7.12 (m, 4H), 6.03 (d, J =
7.8 Hz, 1H), 5.12 (d, J = 2.7 Hz, 1H), 4.30−4.20 (m, 1H), 2.97−2.72
(m, 8H), 2.49 (dd, J = 15.6, 6.4 Hz, 1H), 2.29−2.16 (m, 3H), 1.83 (br s,
4H). MS m/z (APCI): 463.3 [M + H]. HPLC purity: 96%.
Preparation of Monooxalate Salt of 17. To a solution of 2-(2,3-
dihydro-1H-inden-2-yl)-N-((1R,2R)-1-hydroxy-3-(pyrrolidin-1-yl)-1-
(4-(trifluoromethoxy)phenyl)propan-2-yl)acetamide (17, 0.28 g,
0.605 mmol) in isopropanol (10 mL) was added a solution of oxalic
acid (0.055 g, 0.605 mmol) in methanol (5 mL). The resulting mixture
was stirred for 30 min, and then concentrated on a rotary evaporator.
The crude solid was triturated with EtOAc/ether, and stirred for 30 min
and then allowed to set overnight. The mixture was filtered and washed
with ether. After a second trituration with isopropyl alcohol, the white
solid was dried overnight under high vacuum. Elemental analysis calcd
for C25H29N2O3·C2H2O4·0.5H2O: C, 57.75; N, 5.74; N, 4.98. Found:
C, 57.77; H, 5.55; N, 5.00.
Broken Cell Assay for Glucosylceramide Synthase Inhibition.
Enzyme activity was measured as described previously.14 Madin-Darby
canine kidney (MDCK) cell homogenates (120 μg of protein) were
incubated with uridine diphosphate-[3H]glucose (100 000 cpm) and
liposomes consisting of 85 μg of octanoylsphingosine, 570 μg of
dioleoylphosphatidylcholine, and 100 μg of sodium sulfatide in a 200
μL reaction mixture and kept for 1 h at 37 °C. Glucosylceramide
synthase inhibitors dissolved in dimethyl sulfoxide (final concentration
< 1%, which did not affect enzyme activity) were dispersed into the
reaction mixture after adding the liposomes. Seven concentrations of
each analogue were assayed in duplicate and compared to control
activity using buffer alone.
1
69.7% yield). H NMR (400 MHz, chloroform-d) δ 7.43−7.16 (m,
4H), 7.13 (m, 1H), 7.00 (m, 1H), 6.83 (t, J = 8.5 Hz, 1H), 4.50 (d, J =
8.6 Hz, 1H), 3.83 (s, 3H), 3.79−3.59 (m, 2H), 3.14−2.95 (m, 2H),
2.95−2.76 (m, 2H), 2.35−2.12 (m, 1H), 2.04−1.68 (m, 2H), 1.51−
0.99 (m, 4H).
(1R,2R)-1-(3-Fluoro-4-methoxyphenyl)-2-(((S)-2-hydroxy-1-
phenylethyl)amino)-3-(pyrrolidin-1-yl)propan-1-ol (7). To a 0 °C
solution of (3R)-3-(3-fluoro-4-methoxyphenyl)-3-hydroxy-2-(((S)-2-
hydroxy-1-phenylethyl)amino)-1-(pyrrolidin-1-yl)propan-1-one (0.4
g, 0.9 mmol) in dry THF (15 mL) was added lithium aluminum
hydride (0.10 g, 2.9 mmol). The resulting mixture was stirred overnight
at room temperature. After heating to reflux for 1.5 h to complete the
reaction, it was cooled to °0 C and treated dropwise with 0.11 mL of
H2O followed by 0.11 mL of 15% NaOH. The mixture was stirred for 20
min and treated with 3.3 mL of H2O. After stirring for 1 h, the mixture
was filtered through Celite with ether eluent. The eluent was
concentrated and purified by flash chromatography (MeOH/
CH2Cl2) to obtain the title compound (0.3 g, 0.6 mmol, 62.5%
1
yield). H NMR (400 MHz, chloroform-d) δ 7.36−7.21 (m, 5H),
MDCK Cell Assay for Reduction in Glucosylceramide.
Following inhibitor treatment at seven concentrations (assayed in
duplicate), whole cellular lipids of MDCK cells were extracted as
previously described in detail.8 Briefly, cells were washed with ice-cold
PBS, fixed by methanol and collected with a rubber scraper. Chloroform
was then added to yield a theoretical ratio of chloroform−methanol−
water at 1:2:0.8 (v/v/v) to form a monophase. Cell debris and proteins
were removed by centrifugation at 2200 g for 30 min. The supernatants
were portioned by adding chloroform and 0.9% NaCl. The lower
organic phases containing neutral glycosphingolipids lipids were
washed with methanol and 0.9% NaCl and subjected to base- and
acid-hydrolysis. A portion of purified glycosphingolipids normalized to
100 nmol of total phospholipids was analyzed by high-performance
TLC. The TLC separations were processed twice. The plate pretreated
with 1% sodium borate was first developed in a solvent system
consisting of chloroform−methanol (98:2, v/v). After air drying, the
plate was then developed in a solvent system containing chloroform−
methanol−water (70:30:4, v/v/v). The levels of glucosylceramide were
detected by charring with 8% CuSO4·5H2O in 6.8% phosphoric acid
and quantified by densitometric scanning using ImageJ, NIH Image.
Image data was analyzed, and the IC50 of each inhibitor was calculated
using GraphPad Prism.
Determination of Stability to Liver Microsomes. Metabolic
stability was assessed using CD-1 mouse or human liver microsomes. A
concentration of 1 μM of each compound was incubated with 0.5 mg/
mL microsomes and 1.7 mM cofactor β-NADPH in 0.1 M phosphate
buffer (pH = 7.4) containing 3.3 mM MgCl2 at 37 °C. The DMSO
concentration was less than 0.1% in the final incubation system. At 0, 5,
10, 15, 30, 45, and 60 min of incubation, 40 μL of the reaction mixture
were taken out, and the reaction was quenched by adding 3-fold excess
of cold acetonitrile containing 100 ng/mL of internal standard for
quantification. The collected fractions were centrifuged at 15 000 rpm
for 10 min to collect the supernatant for LC−MS/MS analysis, from
which the amount of compound remaining was determined. The
natural log of the amount of compound remaining was plotted against
time to determine the disappearance rate and the half-life of tested
compounds.
7.21−7.12 (m, 1H), 7.12−6.98 (m, 1H), 6.92 (t, J = 8.6 Hz, 1H), 4.51
(d, J = 4.5 Hz, 1H), 3.88 (s, 3H), 3.69 (dd, J = 8.8, 4.3 Hz, 1H), 3.62−
3.44 (m, 4H), 3.08−2.79 (m, 1H), 2.62 (dd, J = 12.5, 8.6 Hz, 1H),
2.50−2.30 (m, 3H), 2.30−2.13 (m, 1H), 1.81−1.52 (m, 3H).
(1R,2R)-2-Amino-1-(3-fluoro-4-methoxyphenyl)-3-(pyrrolidin-1-
yl)propan-1-ol (8). To a solution of (1R)-1-(3-fluoro-4-methoxyphen-
yl)-2-(((S)-2-hydroxy-1-phenylethyl)amino)-3-(pyrrolidin-1-yl)-
propan-1-ol (0.3 g, 0.7 mmol) in methanol (15 mL) and 1 M HCl 10
mL was added palladium on carbon (10% Degussa) (0.08 g, 0.8 mmol).
The resulting mixture was bubbled with N2 for 5 min then placed on a
Parr Hydrogenator, placed briefly under vacuum then filled with
hydrogen gas. The reaction was shaken overnight at room temperature.
The mixture was filtered through Celite with methanol eluent and
concentrated in vacuo. The crude product was purified by flash
chromatography (7% conc ammonia in methanol/CH2Cl2) to obtain
the title compound as an oil (0.11 g, 0.41 mmol, 53% yield). 1H NMR
(500 MHz, chloroform-d) δ 7.62−7.61 (m, 1H), 7.03−6.71 (m, 2H),
4.59 (m, 1H), 3.79 (m, 2H), 3.14 (m, 1H), 2.75−2.26 (m, 5H), 1.78 (br
s, 4H).
2-(2,3-Dihydro-1H-inden-2-yl)-N-((1R,2R)-1-(3-fluoro-4-methox-
yphenyl)-1-hydroxy-3-(pyrrolidin-1-yl)propan-2-yl)acetamide (9,
Compound 15). To a solution of (1R,2R)-2-amino-1-(3-fluoro-4-
methoxyphenyl)-3-(pyrrolidin-1-yl)propan-1-ol (0.10 g, 0.36 mmol) in
THF 10 mL was added 2-(2,3-dihydro-1H-inden-2-yl)acetic acid (0.08
g, 0.45 mmol), HOBt (0.06 g, 0.47 mmol), EDC (0.103 g, 0.54 mmol)
followed by DIPEA (0.14 mL, 0.83 mmol). The resulting mixture was
stirred overnight at room temperature. Saturated NaHCO3 and EtOAc
were added, and the separated aqueous layer was extracted again. The
combined organic layers were washed with saturated NaCl (3×) and
dried (MgSO4). Purification by flash chromatography (gradient of 2.5%
MeOH/CH2Cl2 to 5% to 10% MeOH (with 7% NH3)/CH2Cl2)
afforded pure 15 (0.05 g, 0.11 mmol, 28% yield). 1H NMR (400 MHz,
chloroform-d) δ 7.26 (s, 2H), 7.14 (d, J = 10.3 Hz, 3H), 7.04 (d, J = 8.5
Hz, 1H), 6.92 (t, J = 8.4 Hz, 1H), 6.11 (s, 1H), 5.06 (d, J = 2.8 Hz, 1H),
4.27 (m, 1H), 3.97−3.61 (m, 3H), 3.13−2.60 (m, 7H), 2.49 (dd, J =
15.5, 6.7 Hz, 1H), 2.43−2.08 (m, 3H), 1.87 (s, 4H), 1.25 (s, 4H). MS
m/z (EI): 426.2 [M + H]. HPLC purity: 97%.
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ACS Chem. Neurosci. 2020, 11, 3464−3473