von Braun Cyanogen Bromide Reaction
J . Org. Chem., Vol. 67, No. 6, 2002 1903
rated. The residue was chromatographed on silica gel in
methanol (80:20) to afford the thiocyanate 14 (215 mg, 34%):
1
dichloromethane to lead to compound 5 (liquid, 180 mg, 77%):
mp dec; IRmax (KBr) 2150 cm-1; H NMR (300 MHz, DMSO-
1
IRmax (KBr) 2150 cm-1; H NMR (200 MHz, CDCl3) δ 7.35-
d6) δ 11.48 (1 H, d), 7.79 (1 H, d), 6.00 (1 H, d), 5.66 (1 H, dd),
5.28 (1 H, ls, 5′-OH), 5.18 (1 H, m), 4.55 (1 H, dd), 4.28 (1 H,
m), 3.65 (2 H, m), 3.16 (1 H, ls); 13C NMR (75 MHz, DMSO-d6)
δ 163.1, 150.5, 140.6, 110.5 (SCN), 101.9, 91.9, 86.1, 83.9, 60.7,
53.6; LRMS (DCI+, NH3 + isobutane) m/z ) 286 [M + H]+,
227 [M - HSCN + H]+, 113 [uracil + H]+; HRMS (FAB+, MCA)
calcd for [C10H12O5N3S + H]+ 286.0498, found 286.0495.
1-(3-(2-(Tr im et h ylsilyl)et h yl)-â-D-xylofu r a n osyl)u r a -
cil 17. To a suspension of 2,2′-anhydrouridine 15 (2 g, 8.84
mmol) in anhydrous DMF (50 mL) was added sodium hydride
(65% suspension, 4 g, 108 mmol). The mixture was stirred for
3 h at room temperature under nitrogen, and then 2-(tri-
methylsilyl)ethanethiol (2.5 mL, 13.2 mmol) was added. The
mixture was stirred for 3 h at room temperature, and then,
after cooling at 0 °C, an aqueous ammonium chloride solution
(10%, 20 mL) was added slowly. The mixture was evaporated
to dryness. The residue was dissolved in dichloromethane (300
mL). The solution was washed with water (100 mL), and the
aqueous layer was extracted with dichloromethane (2 × 200
mL). The combined organic extracts were dried over Na2SO4
and evaporated. The residue was chromatographed on silica
gel in dichloromethane-methanol (95:5) to lead to the silyl
sulfide 17 (2.47 g, 6.85 mmol, 78%): mp 165-167 °C; 1H NMR
(300 MHz, DMSO-d6) δ 11.33 (1 H, s), 7.91 (1 H, d), 5.79 (1 H,
d), 5.68 (1 H, d), 5.66 (1 H, d), 5.04 (1 H, t, J ) 4 Hz, 5′-OH),
4.28 (1 H, m, 4′-H), 4.11 (1 H, m, 2′-H), 3.62 (2 H, m, 5′-H),
3.34 (1 H, t), 2.63 (2 H, m), 0.81 (2 H, m), -0.01 (9 H, s); 13C
NMR (75 MHz, DMSO-d6) δ 163.1, 150.8, 140.8, 101.8, 88.0,
80.3, 78.6, 61.4, 50.5, 27.8, 17.2, -1.6; LRMS (FAB+, glycerol)
m/z ) 721 [2M + H]+, 361 [M + H]+. Anal. Calcd for
7.19 (5 H, m), 2.93 (2 H, t), 2.81 (2 H, t), 2.17 (2 H, m); 13C
NMR (50 MHz, CDCl3) δ 139.6, 128.5, 128.2, 126.3, 111.7
(SCN), 33.5, 32.9, 31.0; LRMS (EI) m/z ) 177 [M]•+. Anal. Calcd
for C10H11NS: C, 67.75; H, 6.25; N, 7.90; S, 18.09. Found: C,
67.92; H, 6.22; N, 7.99; S, 17.82.
Gen er a l P r oced u r e for th e Cya n ogen Br om id e Clea v-
a ge. To a solution of sulfide (∼0.6 mmol) in methanol (4 mL)
was added cyanogen bromide (∼6 mmol). The mixture was
stirred for 5-15 h at room temperature, and then aqueous
phosphate buffer (0.5 M, pH 7, 4 mL) was added. The mixture
was stirred for 30 min, and water (20 mL) was added. The
solution was extracted with dichloromethane (150 mL), and
the organic phase was dried over Na2SO4. The residue was
chromatographed on silica gel to afford the corresponding
thiocyanate.
6-(1-Na p h th oxy)h exyl Th iocya n a te 9. Starting silyl sul-
fide 7: 205 mg, 0.59 mmol; cyanogen bromide (630 mg, 5.95
mmol); reaction time, 5 h; eluent for chromatography, pen-
tane-dichloromethane (50:50). Thiocyanate 9: 139 mg, 82%;
mp 44-45 °C; IRmax(KBr) 2160 cm-1 1H NMR (200 MHz,
;
CDCl3) δ 8.27 (1 H, m, Ar-H), 7.80 (1 H, m, Ar-H), 7.50-7.29
(4 H, m, Ar-H), 6.81 (1 H, dd, Ar-H), 4.16 (2 H, t), 2.98 (2 H,
t), 2.04-1.64 (4 H, m), 1.75-1.54 (4 H, m); 13C NMR (50 MHz,
CDCl3) δ 154.7, 134.5, 127.5, 126.3, 125.8, 125.7, 125.1, 121.9,
120.1, 112.3 (SCN), 104.6, 67.7, 33.9, 29.8, 29.1, 27.7, 25.7;
LRMS (EI) m/z ) 285 [M]•+, 144 [naphthol]•+. Anal. Calcd for
C
17H19ONS: C, 71.54; H, 6.71; N, 7.91; S, 11.24. Found: C,
71.47; H, 6.75; N, 7.93; S, 11.53.
Clea va ge of th e Su lfid e 8. Starting sulfide 8: 195 mg, 0.59
mmol; cyanogen bromide (650 mg, 6.13 mmol); reaction time,
15 h. Bromide 6: eluent, pentane-dichloromethane (70:30);
70 mg, 40%. Thiocyanate 9: eluent, pentane-dichloromethane
(50:50); 34 mg, 60%.
C
14H24O5N2SiS: C, 46.64; H, 6.71; N, 7.77; S, 8.89. Found: C,
46.26; H, 6.71; N, 7.72; S, 8.88.
1-(3-Th iocya n a to-â-D-xylofu r a n osyl)u r a cil 18. To a so-
lution of sulfide (100 mg, 0.28 mmol) in methanol (1.5 mL)
was added cyanogen bromide (500 mg, 4.72 mmol) in parts.
The mixture was stirred for 48 h at room temperature, and
then aqueous phosphate buffer (0.5 M, pH 7, 4 mL) and water
(10 mL) were added. The mixture was extracted with dichlo-
romethane (60 mL) and then ethyl acetate (150 mL). The ethyl
acetate solution obtained were dried over Na2SO4 and evapo-
rated. The residue was chromatographed on silica gel in
dichloromethane-methanol (50:50) to afford to the thiocyanate
6-(1-(4-Br om on a p h th yl)oxy)h exyl Th iocya n a te 10. To
a solution of the silyl sulfide 7 (360 mg, 1 mmol) in dichloro-
methane (10 mL) was added cyanogen bromide (1 g, 9.4 mmol).
Monitoring of the reaction by HPLC revealed the formation
of only one compound absorbing in the UV. The mixture was
stirred for 20 h at room temperature, and then aqueous
phosphate buffer (0.5 M, pH 7, 15 mL) was added. The mixture
was stirred for 30 min, and water (10 mL) was added. The
mixture was extracted with dichloromethane (100 mL). The
organic layer was dried over Na2SO4 and evaporated. The resi-
due was chromatographed on silica gel in pentane-dichlo-
romethane (50:50) to lead to the thiocyanate 10 (325 mg,
18 (55 mg, 69%): mp 176-178 °C dec; IRmax (KBr) 2150 cm-1
;
1H NMR (200 MHz, DMSO-d6) δ 11.33 (1 H, s), 7.81 (1 H, d),
6.26 (1 H, d), 5.75 (1 H, d), 5.69 (1 H, d), 5.54 (1 H, t), 4.47 (1
H, m), 4.17 (2 H, m), 3.68 (2 H, m); 13C NMR (50 MHz, DMSO-
d6) δ 162.9, 150.7, 140.1, 113.0 (SCN), 102.2, 86.5, 77.8, 77.7,
60.9; LRMS (DCI+, NH3 + isobutane) m/z ) 303 [M + NH3 +
H]+, 286 [M + H]+, 113 [uracil + H]+, (DCI-, NH3 + isobutane)
m/z ) 569 [2M - H]-, 284 [M - H]-. Anal. Calcd for
89%): mp 64-66 °C; IRmax (KBr) 2160 cm-1 1H NMR (300
;
MHz, CDCl3) δ 8.28 (1 H, m), 8.25 (1 H, m), 7.63-7.48 (3 H,
m), 6.64 (1 H, d), 4.09 (2 H, t), 2.93 (2 H, t), 1.97-1.82 (4 H,
m), 1.65-1.54 (4 H, m); 13C NMR (75 MHz, CDCl3) δ 154.5,
132.4, 129.4, 127.7, 126.8, 126.7, 125.9, 122.4, 113.0, 112.2
(SCN), 105.2, 67.9, 33.9, 29.8, 28.9, 27.7, 25.6; LRMS (FAB+,
NBA) m/z ) 365 [M(81Br) + H]+, 363 [M(79Br) + H]+, 224
[(naphthol - Br)+H]+. Anal. Calcd for C17H18BrONS: C, 56.05;
H, 4.98; N, 3.84; S, 8.80. Found: C, 56.05; H, 4.96; N, 3.89; S,
8.55.
C
10H11O5N3S: C, 42.10; H, 3.89; N, 14.73; S, 11.24. Found: C,
41.80; H, 4.10; N, 14.70; S, 11.19.
5′-Deoxy-5′-(2-(tr im eth ylsilyl)eth yl)a d en osin e 19. To a
solution of 5′-tosyladenosine (500 mg, 1.19 mmol) in anhydrous
DMF (10 mL) were added potassium carbonate (1 g, 7.23
mmol) and then 2-(trimethylsilyl)ethanethiol (0.4 mL, 2.49
mmol). The mixture was stirred at 50 °C under nitrogen for
15 h. After filtration to remove the mineral salts and evapora-
tion, the residue was chromatographed on silica gel in dichlo-
romethane-methanol (90:10) to afford compound 19 (438 mg,
96%). This compound was finally crystallized from methanol:
3′-Deoxy-3′-th iocya n a toth ym id in e 12. Starting silyl sul-
fide 11: 100 mg, 0.28 mmol; methanol (1.5 mL), cyanogen
bromide (300 mg, 2.83 mmol); reaction time, 24 h; eluent,
dichloromethane-methanol (95:5). Thiocyanate 12: 61 mg,
1
77%; mp 112-113 °C; IRmax (KBr) 2160 cm-1; H NMR (200
1
MHz, pyridine-d5) δ 7.56 (1 H, s), 6.65 (1 H, dd), 4.53-4.04 (4
H, m), 2.85 (2 H, m), 1.83 (3 H, s); 13C NMR (75 MHz, pyridine-
d5) δ 164.7, 151.6, 136.3, 111.0 (SCN), 110.6, 86.4, 84.7, 60.3,
43.0, 39.1, 12.6; LRMS (FAB+, glycerol) m/z ) 284 [M + H]+,
127 [thymine + H]+.
mp 125-127 °C; H NMR (200 MHz, DMSO-d6) δ 8.31 (1 H,
s), 8.13 (1 H, s), 7.22 (2 H, s), 5.86 (1 H, d), 5.43 (1 H, d), 5.23
(1 H, d), 4.75 (1 H, m), 4.14 (1 H, m), 3.99 (1 H, m), 2.84 (2 H,
m), 2.50 (2 H, m), 0.71 (2 H, m), -0.12 (9 H, s); 13C NMR (50
MHz, DMSO-d6) δ 156.0, 152.5, 149.4, 139.8, 119.2, 87.5, 84.5,
72.6, 72.5, 33.6, 27.5, 16.6, -1.9; LRMS (FAB+, glycerol)
m/z ) 384 [M + H]+, 136 [adenine + H]+. Anal. Calcd for
2-Deoxy-2′-th iocya n a tou r id in e 14. To a solution of the
silyl sulfide 13 (800 mg, 1.26 mmol) in methanol (3 mL) was
added cyanogen bromide (1.35 g, 12.7 mmol). The mixture was
stirred for 48 h at room temperature and then was poured
slowly into diethyl ether (250 mL). The precipitate was
collected by filtration and washed with diethyl ether. It was
rapidly flash chromatographed on silica gel in dichloromethane-
C
15H25O3N5SiS‚1/2MeOH: C, 46.59; H, 6.81; N, 17.53; S, 8.03.
Found: C, 46.39; H, 6.75; N, 17.53; S, 8.53.
5′-Deoxy-5′-th iocya n a toa d en osin e 20. Starting silyl sul-
fide 19: 100 mg, 0.26 mmol; methanol (2 mL); cyanogen
bromide (500 mg, 4.7 mmol); reaction time 15 h; chromatog-